RNA–Protein interactions for RNA: ENST00000443187.1

PRKD3-203, Transcript of protein kinase D3, humanhuman

TSL 4

Gene PRKD3, Length 695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-203ENST00000443187 PHACTR3Q96KR7 559 aa15.06■□□□□ 0
PRKD3-203ENST00000443187 RSPH6AQ9H0K4 717 aa15.06■□□□□ 0
PRKD3-203ENST00000443187 TFCP2L1Q9NZI6 479 aa15.06■□□□□ 0
PRKD3-203ENST00000443187 CABP4P57796 275 aa15.05■□□□□ -0
PRKD3-203ENST00000443187 COL23A1Q86Y22 540 aaPredicted RBP15.05■□□□□ -0
PRKD3-203ENST00000443187 CFAP53Q96M91 514 aa15.05■□□□□ -0
PRKD3-203ENST00000443187 MTFR1LQ9H019 292 aa15.05■□□□□ -0
PRKD3-203ENST00000443187 MRC1P22897 1456 aa15.04■□□□□ -0
PRKD3-203ENST00000443187 RNMTO43148 476 aaKnown RBP15.04■□□□□ -0
PRKD3-203ENST00000443187 VIRMAQ69YN4 1812 aaKnown RBP15.03■□□□□ -0
PRKD3-203ENST00000443187 COL24A1Q17RW2 1714 aa15.03■□□□□ -0
PRKD3-203ENST00000443187 PRKAR2BP31323 418 aa15.03■□□□□ -0
PRKD3-203ENST00000443187 UBR3Q6ZT12 1888 aa15.02■□□□□ -0
PRKD3-203ENST00000443187 ATP6V1AP38606 617 aa15.02■□□□□ -0
PRKD3-203ENST00000443187 SLC52A2Q9HAB3 445 aa15.02■□□□□ -0
PRKD3-203ENST00000443187 U2AF1L5P0DN76 240 aaPredicted RBP15.01□□□□□ -0.01
PRKD3-203ENST00000443187 U2AF1Q01081 240 aaKnown RBP eCLIP15.01□□□□□ -0.01
PRKD3-203ENST00000443187 IL17REQ8NFR9 667 aa15.01□□□□□ -0.01
PRKD3-203ENST00000443187 RBM42Q9BTD8 480 aaKnown RBP15.01□□□□□ -0.01
PRKD3-203ENST00000443187 ZNF831Q5JPB2 1677 aa15□□□□□ -0.01
PRKD3-203ENST00000443187 PTCD1O75127 700 aaKnown RBP15□□□□□ -0.01
PRKD3-203ENST00000443187 SLC39A6Q13433 755 aa15□□□□□ -0.01
PRKD3-203ENST00000443187 PPP1R1BQ9UD71 204 aaPredicted RBP15□□□□□ -0.01
PRKD3-203ENST00000443187 COL5A3P25940 1745 aaPredicted RBP15□□□□□ -0.01
PRKD3-203ENST00000443187 TJP1Q07157 1748 aa15□□□□□ -0.01
PRKD3-203ENST00000443187 MAP3K5Q99683 1374 aa14.99□□□□□ -0.01
PRKD3-203ENST00000443187 ZEB1P37275 1124 aaPredicted RBP14.99□□□□□ -0.01
PRKD3-203ENST00000443187 SLC16A10Q8TF71 515 aa14.99□□□□□ -0.01
PRKD3-203ENST00000443187 AK7Q96M32 723 aa14.99□□□□□ -0.01
PRKD3-203ENST00000443187 NUDCQ9Y266 331 aa14.99□□□□□ -0.01
PRKD3-203ENST00000443187 KCPQ6ZWJ8 1503 aa14.98□□□□□ -0.01
PRKD3-203ENST00000443187 FCHSD2O94868 740 aa14.98□□□□□ -0.01
PRKD3-203ENST00000443187 PHF14O94880 888 aa14.98□□□□□ -0.01
PRKD3-203ENST00000443187 MSL1Q68DK7 614 aa14.98□□□□□ -0.01
PRKD3-203ENST00000443187 GAS2L2Q8NHY3 880 aa14.98□□□□□ -0.01
PRKD3-203ENST00000443187 MYH14Q7Z406 1995 aaKnown RBP14.98□□□□□ -0.01
PRKD3-203ENST00000443187 CICQ96RK0 1608 aaPredicted RBP14.97□□□□□ -0.01
PRKD3-203ENST00000443187 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.97□□□□□ -0.01
PRKD3-203ENST00000443187 GNAT3A8MTJ3 354 aa14.97□□□□□ -0.01
PRKD3-203ENST00000443187 GNPATO15228 680 aa14.97□□□□□ -0.01
PRKD3-203ENST00000443187 MSH5O43196 834 aa14.97□□□□□ -0.01
PRKD3-203ENST00000443187 RALBP1Q15311 655 aa14.97□□□□□ -0.01
PRKD3-203ENST00000443187 FHDC1Q9C0D6 1143 aaPredicted RBP14.97□□□□□ -0.01
PRKD3-203ENST00000443187 SIPA1L3O60292 1781 aaPredicted RBP14.97□□□□□ -0.01
PRKD3-203ENST00000443187 CEMIPQ8WUJ3 1361 aa14.97□□□□□ -0.01
PRKD3-203ENST00000443187 ARXQ96QS3 562 aa14.96□□□□□ -0.01
PRKD3-203ENST00000443187 PLEKHF1Q96S99 279 aa14.95□□□□□ -0.02
PRKD3-203ENST00000443187 SYT17Q9BSW7 474 aa14.95□□□□□ -0.02
PRKD3-203ENST00000443187 UBR2Q8IWV8 1755 aa14.95□□□□□ -0.02
PRKD3-203ENST00000443187 CNTNAP4Q9C0A0 1308 aa14.94□□□□□ -0.02
PRKD3-203ENST00000443187 SSFA2P28290 1259 aa14.94□□□□□ -0.02
PRKD3-203ENST00000443187 DCTN1Q14203 1278 aa14.94□□□□□ -0.02
PRKD3-203ENST00000443187 DNAJC10Q8IXB1 793 aa14.94□□□□□ -0.02
PRKD3-203ENST00000443187 MYBBP1AQ9BQG0 1328 aaKnown RBP14.93□□□□□ -0.02
PRKD3-203ENST00000443187 KCNQ3O43525 872 aa14.93□□□□□ -0.02
PRKD3-203ENST00000443187 CRKLP46109 303 aaKnown RBP14.93□□□□□ -0.02
PRKD3-203ENST00000443187 RC3H1Q5TC82 1133 aaKnown RBP14.93□□□□□ -0.02
PRKD3-203ENST00000443187 MCM10Q7L590 875 aa14.93□□□□□ -0.02
PRKD3-203ENST00000443187 FLAD1Q8NFF5 587 aa14.93□□□□□ -0.02
PRKD3-203ENST00000443187 RPS6KA4O75676 772 aa14.92□□□□□ -0.02
PRKD3-203ENST00000443187 INTS5Q6P9B9 1019 aaKnown RBP14.92□□□□□ -0.02
PRKD3-203ENST00000443187 PRKRIP1Q9H875 184 aaPredicted RBP14.92□□□□□ -0.02
PRKD3-203ENST00000443187 POLD1P28340 1107 aa14.91□□□□□ -0.02
PRKD3-203ENST00000443187 TEFQ10587 303 aa14.91□□□□□ -0.02
PRKD3-203ENST00000443187 ARHGEF1Q92888 912 aaKnown RBP14.91□□□□□ -0.02
PRKD3-203ENST00000443187 ZNF496Q96IT1 587 aaPredicted RBP14.91□□□□□ -0.02
PRKD3-203ENST00000443187 UTRNP46939 3433 aa14.91□□□□□ -0.02
PRKD3-203ENST00000443187 C4AP0C0L4 1744 aa14.91□□□□□ -0.02
PRKD3-203ENST00000443187 DLG5Q8TDM6 1919 aa14.9□□□□□ -0.02
PRKD3-203ENST00000443187 CYP19A1P11511 503 aaPredicted RBP14.9□□□□□ -0.02
PRKD3-203ENST00000443187 HMGB2P26583 209 aaKnown RBP14.9□□□□□ -0.02
PRKD3-203ENST00000443187 ZNF790Q6PG37 636 aa14.9□□□□□ -0.02
PRKD3-203ENST00000443187 NLGN2Q8NFZ4 835 aa14.9□□□□□ -0.02
PRKD3-203ENST00000443187 RTCBQ9Y3I0 505 aaKnown RBP14.9□□□□□ -0.02
PRKD3-203ENST00000443187 GOLGB1Q14789 3259 aaKnown RBP14.89□□□□□ -0.03
PRKD3-203ENST00000443187 ZNF316A6NFI3 1004 aaPredicted RBP14.88□□□□□ -0.03
PRKD3-203ENST00000443187 TRAPPC3LQ5T215 181 aa14.88□□□□□ -0.03
PRKD3-203ENST00000443187 KLHL34Q8N239 644 aa14.88□□□□□ -0.03
PRKD3-203ENST00000443187 THUMPD2Q9BTF0 503 aaKnown RBP14.88□□□□□ -0.03
PRKD3-203ENST00000443187 SRP68Q9UHB9 627 aaKnown RBP14.88□□□□□ -0.03
PRKD3-203ENST00000443187 ZBTB1Q9Y2K1 713 aa14.88□□□□□ -0.03
PRKD3-203ENST00000443187 HEG1Q9ULI3 1381 aa14.87□□□□□ -0.03
PRKD3-203ENST00000443187 GYS1P13807 737 aa14.87□□□□□ -0.03
PRKD3-203ENST00000443187 NFE2L2Q16236 605 aa14.87□□□□□ -0.03
PRKD3-203ENST00000443187 VSIG10Q8N0Z9 540 aa14.87□□□□□ -0.03
PRKD3-203ENST00000443187 CCDC87Q9NVE4 849 aa14.87□□□□□ -0.03
PRKD3-203ENST00000443187 PRAMEF22A3QJZ6 481 aa14.86□□□□□ -0.03
PRKD3-203ENST00000443187 BTBD11A6QL63 1104 aa14.86□□□□□ -0.03
PRKD3-203ENST00000443187 HTATSF1O43719 755 aaKnown RBP14.86□□□□□ -0.03
PRKD3-203ENST00000443187 ADRA2BP18089 450 aa14.86□□□□□ -0.03
PRKD3-203ENST00000443187 TTC5Q8N0Z6 440 aa14.86□□□□□ -0.03
PRKD3-203ENST00000443187 RTF1Q92541 710 aaKnown RBP14.86□□□□□ -0.03
PRKD3-203ENST00000443187 MIS18AQ9NYP9 233 aa14.86□□□□□ -0.03
PRKD3-203ENST00000443187 SOS1Q07889 1333 aaPredicted RBP14.86□□□□□ -0.03
PRKD3-203ENST00000443187 CCDC184Q52MB2 194 aa14.85□□□□□ -0.03
PRKD3-203ENST00000443187 CCDC146Q8IYE0 955 aa14.85□□□□□ -0.03
PRKD3-203ENST00000443187 MMP10P09238 476 aa14.84□□□□□ -0.03
PRKD3-203ENST00000443187 RFC4P35249 363 aa14.84□□□□□ -0.03
PRKD3-203ENST00000443187 ADAMTS8Q9UP79 889 aa14.84□□□□□ -0.03
PRKD3-203ENST00000443187 USP42Q9H9J4 1324 aaKnown RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms