RNA–Protein interactions for RNA: ENST00000442691.6

NR1I3-211, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-211ENST00000442691 RAPGEF4Q8WZA2 1011 aa11.75□□□□□ -0.53
NR1I3-211ENST00000442691 LTV1Q96GA3 475 aaPredicted RBP11.75□□□□□ -0.53
NR1I3-211ENST00000442691 CARD10Q9BWT7 1032 aa11.75□□□□□ -0.53
NR1I3-211ENST00000442691 RYDENQ9NUL5 291 aaKnown RBP11.75□□□□□ -0.53
NR1I3-211ENST00000442691 JCADQ9P266 1359 aa11.75□□□□□ -0.53
NR1I3-211ENST00000442691 PARP4Q9UKK3 1724 aaKnown RBP11.74□□□□□ -0.53
NR1I3-211ENST00000442691 RGPD5Q99666 1765 aa11.74□□□□□ -0.53
NR1I3-211ENST00000442691 ZBTB7CA1YPR0 619 aa11.74□□□□□ -0.53
NR1I3-211ENST00000442691 CHL1O00533 1208 aa11.74□□□□□ -0.53
NR1I3-211ENST00000442691 PSEN1P49768 467 aa11.74□□□□□ -0.53
NR1I3-211ENST00000442691 BRPF1P55201 1214 aaPredicted RBP11.74□□□□□ -0.53
NR1I3-211ENST00000442691 KIF12Q96FN5 646 aa11.74□□□□□ -0.53
NR1I3-211ENST00000442691 PLCH1Q4KWH8 1693 aa11.74□□□□□ -0.53
NR1I3-211ENST00000442691 SENP3-EIF4A1A0A087X0R7 540 aa11.73□□□□□ -0.53
NR1I3-211ENST00000442691 TATP17735 454 aaPredicted RBP11.73□□□□□ -0.53
NR1I3-211ENST00000442691 ALDH1L2Q3SY69 923 aa11.73□□□□□ -0.53
NR1I3-211ENST00000442691 SPATA31A6Q5VVP1 1343 aa11.73□□□□□ -0.53
NR1I3-211ENST00000442691 CHMP4AQ9BY43 222 aa11.73□□□□□ -0.53
NR1I3-211ENST00000442691 NLRP2Q9NX02 1062 aa11.73□□□□□ -0.53
NR1I3-211ENST00000442691 NWD2Q9ULI1 1742 aa11.73□□□□□ -0.53
NR1I3-211ENST00000442691 SPG7Q9UQ90 795 aa11.73□□□□□ -0.53
NR1I3-211ENST00000442691 RGPD2P0DJD1 1756 aa11.72□□□□□ -0.53
NR1I3-211ENST00000442691 MAP3K13O43283 966 aa11.72□□□□□ -0.53
NR1I3-211ENST00000442691 HSP90AB1P08238 724 aaKnown RBP11.72□□□□□ -0.53
NR1I3-211ENST00000442691 CSB-PGBD3P0DP91 1061 aa11.72□□□□□ -0.53
NR1I3-211ENST00000442691 CD44P16070 742 aaKnown RBP11.72□□□□□ -0.53
NR1I3-211ENST00000442691 CHRNA2Q15822 529 aa11.72□□□□□ -0.53
NR1I3-211ENST00000442691 C1orf141Q5JVX7 400 aa11.72□□□□□ -0.53
NR1I3-211ENST00000442691 MEGF6O75095 1541 aa11.71□□□□□ -0.53
NR1I3-211ENST00000442691 MRC1P22897 1456 aa11.71□□□□□ -0.53
NR1I3-211ENST00000442691 FAM83GA6ND36 823 aa11.71□□□□□ -0.53
NR1I3-211ENST00000442691 RARSP54136 660 aaKnown RBP11.71□□□□□ -0.53
NR1I3-211ENST00000442691 AAMPQ13685 434 aa11.71□□□□□ -0.53
NR1I3-211ENST00000442691 ZNF530Q6P9A1 599 aaPredicted RBP11.71□□□□□ -0.53
NR1I3-211ENST00000442691 IFNL1Q8IU54 200 aa11.71□□□□□ -0.53
NR1I3-211ENST00000442691 USHBP1Q8N6Y0 703 aa11.71□□□□□ -0.53
NR1I3-211ENST00000442691 KIF16BQ96L93 1317 aa11.7□□□□□ -0.54
NR1I3-211ENST00000442691 MS4A1P11836 297 aa11.7□□□□□ -0.54
NR1I3-211ENST00000442691 PDE3AQ14432 1141 aa11.7□□□□□ -0.54
NR1I3-211ENST00000442691 CDCA7Q9BWT1 371 aaPredicted RBP11.7□□□□□ -0.54
NR1I3-211ENST00000442691 MBIPQ9NS73 344 aa11.7□□□□□ -0.54
NR1I3-211ENST00000442691 SLIT2O94813 1529 aa11.7□□□□□ -0.54
NR1I3-211ENST00000442691 PCDH11XQ9BZA7 1347 aa11.69□□□□□ -0.54
NR1I3-211ENST00000442691 PCDH11YQ9BZA8 1340 aa11.69□□□□□ -0.54
NR1I3-211ENST00000442691 HOXB7P09629 217 aa11.69□□□□□ -0.54
NR1I3-211ENST00000442691 PIP4K2BP78356 416 aa11.69□□□□□ -0.54
NR1I3-211ENST00000442691 EXOSC9Q06265 439 aaKnown RBP11.69□□□□□ -0.54
NR1I3-211ENST00000442691 TAF7Q15545 349 aaPredicted RBP11.69□□□□□ -0.54
NR1I3-211ENST00000442691 TOM1L2Q6ZVM7 507 aa11.69□□□□□ -0.54
NR1I3-211ENST00000442691 TSR2Q969E8 191 aaKnown RBP11.69□□□□□ -0.54
NR1I3-211ENST00000442691 THRAP3Q9Y2W1 955 aaKnown RBP11.69□□□□□ -0.54
NR1I3-211ENST00000442691 DISP2A7MBM2 1401 aa11.69□□□□□ -0.54
NR1I3-211ENST00000442691 MCM10Q7L590 875 aa11.68□□□□□ -0.54
NR1I3-211ENST00000442691 IFNL2Q8IZJ0 200 aa11.68□□□□□ -0.54
NR1I3-211ENST00000442691 IL17REQ8NFR9 667 aa11.68□□□□□ -0.54
NR1I3-211ENST00000442691 NRAPQ86VF7 1730 aa11.68□□□□□ -0.54
NR1I3-211ENST00000442691 IL2RBP14784 551 aa11.67□□□□□ -0.54
NR1I3-211ENST00000442691 EVA1CP58658 441 aa11.67□□□□□ -0.54
NR1I3-211ENST00000442691 DCAF5Q96JK2 942 aa11.67□□□□□ -0.54
NR1I3-211ENST00000442691 THUMPD2Q9BTF0 503 aaKnown RBP11.67□□□□□ -0.54
NR1I3-211ENST00000442691 PPP4R2Q9NY27 417 aa11.67□□□□□ -0.54
NR1I3-211ENST00000442691 IPO8O15397 1037 aaKnown RBP11.66□□□□□ -0.54
NR1I3-211ENST00000442691 RNMTO43148 476 aaKnown RBP11.66□□□□□ -0.54
NR1I3-211ENST00000442691 VAMP4O75379 141 aa11.66□□□□□ -0.54
NR1I3-211ENST00000442691 PHKG2P15735 406 aa11.66□□□□□ -0.54
NR1I3-211ENST00000442691 TEFQ10587 303 aa11.66□□□□□ -0.54
NR1I3-211ENST00000442691 DCTN1Q14203 1278 aa11.66□□□□□ -0.54
NR1I3-211ENST00000442691 TWISTNBQ3B726 338 aaPredicted RBP11.66□□□□□ -0.54
NR1I3-211ENST00000442691 ARHGAP45Q92619 1136 aa11.66□□□□□ -0.54
NR1I3-211ENST00000442691 BTG4Q9NY30 223 aa11.66□□□□□ -0.54
NR1I3-211ENST00000442691 TSPYL4Q9UJ04 414 aa11.66□□□□□ -0.54
NR1I3-211ENST00000442691 KDM3BQ7LBC6 1761 aa11.66□□□□□ -0.54
NR1I3-211ENST00000442691 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.66□□□□□ -0.54
NR1I3-211ENST00000442691 LRP6O75581 1613 aa11.65□□□□□ -0.54
NR1I3-211ENST00000442691 SIPA1L3O60292 1781 aaPredicted RBP11.65□□□□□ -0.54
NR1I3-211ENST00000442691 ZCRB1Q8TBF4 217 aaKnown RBP11.65□□□□□ -0.54
NR1I3-211ENST00000442691 PHF12Q96QT6 1004 aa11.65□□□□□ -0.54
NR1I3-211ENST00000442691 WNK3Q9BYP7 1800 aa11.65□□□□□ -0.55
NR1I3-211ENST00000442691 SCN11AQ9UI33 1791 aa11.64□□□□□ -0.55
NR1I3-211ENST00000442691 KDM6AO15550 1401 aaPredicted RBP11.64□□□□□ -0.55
NR1I3-211ENST00000442691 LARP1Q6PKG0 1096 aaKnown RBP11.64□□□□□ -0.55
NR1I3-211ENST00000442691 SMC4Q9NTJ3 1288 aa11.64□□□□□ -0.55
NR1I3-211ENST00000442691 LAS1LQ9Y4W2 734 aaKnown RBP11.64□□□□□ -0.55
NR1I3-211ENST00000442691 TNS2Q63HR2 1409 aa11.63□□□□□ -0.55
NR1I3-211ENST00000442691 BCAR3O75815 825 aa11.63□□□□□ -0.55
NR1I3-211ENST00000442691 ZKSCAN2Q63HK3 967 aa11.63□□□□□ -0.55
NR1I3-211ENST00000442691 SSH1Q8WYL5 1049 aa11.63□□□□□ -0.55
NR1I3-211ENST00000442691 HEG1Q9ULI3 1381 aa11.63□□□□□ -0.55
NR1I3-211ENST00000442691 ERVV-2B6SEH9 535 aa11.62□□□□□ -0.55
NR1I3-211ENST00000442691 CYP27B1O15528 508 aa11.62□□□□□ -0.55
NR1I3-211ENST00000442691 BARGINQ6ZT62 677 aa11.62□□□□□ -0.55
NR1I3-211ENST00000442691 FNBP4Q8N3X1 1017 aaPredicted RBP11.62□□□□□ -0.55
NR1I3-211ENST00000442691 CHMP4BQ9H444 224 aaKnown RBP11.62□□□□□ -0.55
NR1I3-211ENST00000442691 SLC52A2Q9HAB3 445 aa11.62□□□□□ -0.55
NR1I3-211ENST00000442691 STRN4Q9NRL3 753 aa11.62□□□□□ -0.55
NR1I3-211ENST00000442691 SPATA31A1Q5TZJ5 1347 aa11.61□□□□□ -0.55
NR1I3-211ENST00000442691 SPATA31A5Q5VU36 1347 aa11.61□□□□□ -0.55
NR1I3-211ENST00000442691 SPATA31A7Q8IWB4 1347 aa11.61□□□□□ -0.55
NR1I3-211ENST00000442691 SHANK3Q9BYB0 1731 aa11.61□□□□□ -0.55
NR1I3-211ENST00000442691 CANXP27824 592 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms