RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 RTL1A6NKG5 1358 aa17.25■□□□□ 0.35
MCF2L-218ENST00000442625 PDLIM2Q96JY6 352 aa17.24■□□□□ 0.35
MCF2L-218ENST00000442625 DLC1Q96QB1 1528 aa17.24■□□□□ 0.35
MCF2L-218ENST00000442625 CHL1O00533 1208 aa17.24■□□□□ 0.35
MCF2L-218ENST00000442625 DTNBO60941 627 aa17.24■□□□□ 0.35
MCF2L-218ENST00000442625 RPAP2Q8IXW5 612 aaPredicted RBP17.24■□□□□ 0.35
MCF2L-218ENST00000442625 FOXO3O43524 673 aa17.23■□□□□ 0.35
MCF2L-218ENST00000442625 RIMBP3CA6NJZ7 1639 aa17.23■□□□□ 0.35
MCF2L-218ENST00000442625 RIMBP3BA6NNM3 1639 aa17.23■□□□□ 0.35
MCF2L-218ENST00000442625 RIMBP3Q9UFD9 1639 aa17.23■□□□□ 0.35
MCF2L-218ENST00000442625 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.23■□□□□ 0.35
MCF2L-218ENST00000442625 G2E3Q7L622 706 aa17.23■□□□□ 0.35
MCF2L-218ENST00000442625 TMX3Q96JJ7 454 aa17.22■□□□□ 0.35
MCF2L-218ENST00000442625 PALD1Q9ULE6 856 aa17.22■□□□□ 0.35
MCF2L-218ENST00000442625 CASC1Q6TDU7 716 aa17.22■□□□□ 0.35
MCF2L-218ENST00000442625 LRSAM1Q6UWE0 723 aa17.22■□□□□ 0.35
MCF2L-218ENST00000442625 KIF24Q5T7B8 1368 aa17.22■□□□□ 0.35
MCF2L-218ENST00000442625 CWC22Q9HCG8 908 aaKnown RBP17.21■□□□□ 0.35
MCF2L-218ENST00000442625 EXOC6BQ9Y2D4 811 aa17.21■□□□□ 0.35
MCF2L-218ENST00000442625 ZKSCAN5Q9Y2L8 839 aa17.21■□□□□ 0.35
MCF2L-218ENST00000442625 CYB5RLQ6IPT4 315 aa17.21■□□□□ 0.35
MCF2L-218ENST00000442625 FAM69CQ0P6D2 419 aa17.2■□□□□ 0.34
MCF2L-218ENST00000442625 ZNF830Q96NB3 372 aaPredicted RBP17.2■□□□□ 0.34
MCF2L-218ENST00000442625 ERC2O15083 957 aa17.2■□□□□ 0.34
MCF2L-218ENST00000442625 ZNF500O60304 480 aaPredicted RBP17.2■□□□□ 0.34
MCF2L-218ENST00000442625 TSC1Q92574 1164 aa17.2■□□□□ 0.34
MCF2L-218ENST00000442625 GADD45BO75293 160 aaPredicted RBP17.2■□□□□ 0.34
MCF2L-218ENST00000442625 TEX2Q8IWB9 1127 aa17.2■□□□□ 0.34
MCF2L-218ENST00000442625 UPF3BQ9BZI7 483 aaKnown RBP17.2■□□□□ 0.34
MCF2L-218ENST00000442625 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.19■□□□□ 0.34
MCF2L-218ENST00000442625 REREQ9P2R6 1566 aa17.19■□□□□ 0.34
MCF2L-218ENST00000442625 REC8O95072 547 aa17.19■□□□□ 0.34
MCF2L-218ENST00000442625 SETD1AO15047 1707 aaKnown RBP17.18■□□□□ 0.34
MCF2L-218ENST00000442625 NECTIN2Q92692 538 aa17.18■□□□□ 0.34
MCF2L-218ENST00000442625 PTPRCP08575 1304 aa17.18■□□□□ 0.34
MCF2L-218ENST00000442625 TTC21BQ7Z4L5 1316 aa17.18■□□□□ 0.34
MCF2L-218ENST00000442625 PTMAP06454 111 aaKnown RBP17.18■□□□□ 0.34
MCF2L-218ENST00000442625 LARP6Q9BRS8 491 aaKnown RBP17.18■□□□□ 0.34
MCF2L-218ENST00000442625 PDE1AP54750 535 aa17.17■□□□□ 0.34
MCF2L-218ENST00000442625 C17orf53Q8N3J3 647 aaPredicted RBP17.17■□□□□ 0.34
MCF2L-218ENST00000442625 ACEP12821 1306 aa17.17■□□□□ 0.34
MCF2L-218ENST00000442625 RILPL2Q969X0 211 aa17.17■□□□□ 0.34
MCF2L-218ENST00000442625 TSPYL4Q9UJ04 414 aa17.17■□□□□ 0.34
MCF2L-218ENST00000442625 FAM177BA6PVY3 158 aa17.16■□□□□ 0.34
MCF2L-218ENST00000442625 HS1BP3Q53T59 392 aa17.16■□□□□ 0.34
MCF2L-218ENST00000442625 ANO2Q9NQ90 1003 aa17.16■□□□□ 0.34
MCF2L-218ENST00000442625 MTHFSDQ2M296 383 aaKnown RBP17.15■□□□□ 0.34
MCF2L-218ENST00000442625 SECISBP2LQ93073 1101 aaKnown RBP17.15■□□□□ 0.34
MCF2L-218ENST00000442625 PRDM10Q9NQV6 1147 aa17.15■□□□□ 0.34
MCF2L-218ENST00000442625 PRDM4Q9UKN5 801 aa17.15■□□□□ 0.34
MCF2L-218ENST00000442625 NRXN3Q9Y4C0 1643 aa17.15■□□□□ 0.34
MCF2L-218ENST00000442625 KIAA0232Q92628 1395 aa17.15■□□□□ 0.34
MCF2L-218ENST00000442625 MAP3K19Q56UN5 1328 aa17.14■□□□□ 0.34
MCF2L-218ENST00000442625 TRIM6-TRIM34B2RNG4 842 aa17.14■□□□□ 0.33
MCF2L-218ENST00000442625 HMMRO75330 724 aa17.14■□□□□ 0.33
MCF2L-218ENST00000442625 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.14■□□□□ 0.33
MCF2L-218ENST00000442625 ROBO2Q9HCK4 1378 aa17.14■□□□□ 0.33
MCF2L-218ENST00000442625 UNC5CLQ8IV45 518 aa17.14■□□□□ 0.33
MCF2L-218ENST00000442625 IL25Q9H293 177 aa17.14■□□□□ 0.33
MCF2L-218ENST00000442625 CRB1P82279 1406 aa17.13■□□□□ 0.33
MCF2L-218ENST00000442625 BRD1O95696 1058 aa17.13■□□□□ 0.33
MCF2L-218ENST00000442625 CCDC39Q9UFE4 941 aa17.13■□□□□ 0.33
MCF2L-218ENST00000442625 C3P01024 1663 aa17.13■□□□□ 0.33
MCF2L-218ENST00000442625 MON2Q7Z3U7 1717 aa17.13■□□□□ 0.33
MCF2L-218ENST00000442625 MAP4K4O95819 1239 aaPredicted RBP17.12■□□□□ 0.33
MCF2L-218ENST00000442625 RTF1Q92541 710 aaKnown RBP17.12■□□□□ 0.33
MCF2L-218ENST00000442625 TSPY26PQ9H489 355 aa17.12■□□□□ 0.33
MCF2L-218ENST00000442625 PNMA6EA0A0J9YXQ4 647 aa17.12■□□□□ 0.33
MCF2L-218ENST00000442625 DNTTIP2Q5QJE6 756 aaKnown RBP17.12■□□□□ 0.33
MCF2L-218ENST00000442625 ESYT1Q9BSJ8 1104 aa17.12■□□□□ 0.33
MCF2L-218ENST00000442625 SPATA31D1Q6ZQQ2 1576 aa17.12■□□□□ 0.33
MCF2L-218ENST00000442625 CHRM1P11229 460 aaPredicted RBP17.12■□□□□ 0.33
MCF2L-218ENST00000442625 KCNA4P22459 653 aa17.11■□□□□ 0.33
MCF2L-218ENST00000442625 USP48Q86UV5 1035 aa17.11■□□□□ 0.33
MCF2L-218ENST00000442625 GNAI2P04899 355 aa17.11■□□□□ 0.33
MCF2L-218ENST00000442625 USP25Q9UHP3 1055 aa17.11■□□□□ 0.33
MCF2L-218ENST00000442625 ESF1Q9H501 851 aaKnown RBP17.1■□□□□ 0.33
MCF2L-218ENST00000442625 TTC12Q9H892 705 aaPredicted RBP17.1■□□□□ 0.33
MCF2L-218ENST00000442625 CCT4P50991 539 aaKnown RBP17.1■□□□□ 0.33
MCF2L-218ENST00000442625 TERF1P54274 439 aa17.1■□□□□ 0.33
MCF2L-218ENST00000442625 FKBP5Q13451 457 aaPredicted RBP17.1■□□□□ 0.33
MCF2L-218ENST00000442625 NRKQ7Z2Y5 1582 aa17.09■□□□□ 0.33
MCF2L-218ENST00000442625 MBD3O95983 291 aa17.09■□□□□ 0.33
MCF2L-218ENST00000442625 MX1P20591 662 aa17.09■□□□□ 0.33
MCF2L-218ENST00000442625 PLCB2Q00722 1185 aa17.09■□□□□ 0.33
MCF2L-218ENST00000442625 LRRCC1Q9C099 1032 aa17.09■□□□□ 0.33
MCF2L-218ENST00000442625 OSBPL3Q9H4L5 887 aa17.09■□□□□ 0.33
MCF2L-218ENST00000442625 IL1RAPL2Q9NP60 686 aa17.09■□□□□ 0.33
MCF2L-218ENST00000442625 OVOS2A0A0J9YW53 1432 aa17.08■□□□□ 0.33
MCF2L-218ENST00000442625 OVOS2Q6IE36 1432 aa17.08■□□□□ 0.33
MCF2L-218ENST00000442625 PEAK1Q9H792 1746 aa17.08■□□□□ 0.33
MCF2L-218ENST00000442625 SASS6Q6UVJ0 657 aa17.08■□□□□ 0.33
MCF2L-218ENST00000442625 STK31Q9BXU1 1019 aa17.08■□□□□ 0.33
MCF2L-218ENST00000442625 TSPOAP1O95153 1857 aa17.08■□□□□ 0.33
MCF2L-218ENST00000442625 RIMS1Q86UR5 1692 aaKnown RBP17.08■□□□□ 0.32
MCF2L-218ENST00000442625 PPP6R1Q9UPN7 881 aa17.08■□□□□ 0.32
MCF2L-218ENST00000442625 ITSN1Q15811 1721 aa17.08■□□□□ 0.32
MCF2L-218ENST00000442625 CHMLP26374 656 aa17.07■□□□□ 0.32
MCF2L-218ENST00000442625 TCHHQ07283 1943 aa17.07■□□□□ 0.32
MCF2L-218ENST00000442625 FLIIQ13045 1269 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms