RNA–Protein interactions for RNA: ENST00000441892.6

CDH17-202, Transcript of cadherin 17, humanhuman

TSL 2 BASIC

Gene CDH17, Length 2,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17-202ENST00000441892 KMT5BQ4FZB7 885 aa9.51□□□□□ -0.89
CDH17-202ENST00000441892 ATF7IPQ6VMQ6 1270 aa9.51□□□□□ -0.89
CDH17-202ENST00000441892 SLC52A1Q9NWF4 448 aa9.51□□□□□ -0.89
CDH17-202ENST00000441892 RNF17Q9BXT8 1623 aaKnown RBP9.51□□□□□ -0.89
CDH17-202ENST00000441892 DHX16O60231 1041 aaKnown RBP9.51□□□□□ -0.89
CDH17-202ENST00000441892 GTF2A1P52655 376 aaPredicted RBP9.51□□□□□ -0.89
CDH17-202ENST00000441892 CCDC183Q5T5S1 534 aa9.51□□□□□ -0.89
CDH17-202ENST00000441892 DHX37Q8IY37 1157 aaKnown RBP9.51□□□□□ -0.89
CDH17-202ENST00000441892 WDR70Q9NW82 654 aa9.51□□□□□ -0.89
CDH17-202ENST00000441892 CEP152O94986 1710 aa9.5□□□□□ -0.89
CDH17-202ENST00000441892 TCP11L2Q8N4U5 519 aa9.5□□□□□ -0.89
CDH17-202ENST00000441892 USP26Q9BXU7 913 aa9.5□□□□□ -0.89
CDH17-202ENST00000441892 BRMS1Q9HCU9 246 aa9.5□□□□□ -0.89
CDH17-202ENST00000441892 SMC4Q9NTJ3 1288 aa9.5□□□□□ -0.89
CDH17-202ENST00000441892 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.5□□□□□ -0.89
CDH17-202ENST00000441892 RAD50Q92878 1312 aa9.5□□□□□ -0.89
CDH17-202ENST00000441892 DEPDC5O75140 1603 aa9.5□□□□□ -0.89
CDH17-202ENST00000441892 CFAP65Q6ZU64 1925 aaKnown RBP9.5□□□□□ -0.89
CDH17-202ENST00000441892 PTPRMP28827 1452 aa9.5□□□□□ -0.89
CDH17-202ENST00000441892 RBM6P78332 1123 aaKnown RBP9.5□□□□□ -0.89
CDH17-202ENST00000441892 ZBTB9Q96C00 473 aa9.5□□□□□ -0.89
CDH17-202ENST00000441892 CHAMP1Q96JM3 812 aa9.5□□□□□ -0.89
CDH17-202ENST00000441892 TRERF1Q96PN7 1200 aa9.5□□□□□ -0.89
CDH17-202ENST00000441892 MYCBPQ99417 103 aaPredicted RBP9.5□□□□□ -0.89
CDH17-202ENST00000441892 C3P01024 1663 aa9.49□□□□□ -0.89
CDH17-202ENST00000441892 TESPA1A2RU30 521 aaPredicted RBP9.49□□□□□ -0.89
CDH17-202ENST00000441892 PYGBP11216 843 aa9.49□□□□□ -0.89
CDH17-202ENST00000441892 TNNT1P13805 278 aa9.49□□□□□ -0.89
CDH17-202ENST00000441892 HCLS1P14317 486 aaPredicted RBP9.49□□□□□ -0.89
CDH17-202ENST00000441892 ANKRD45Q5TZF3 282 aa9.49□□□□□ -0.89
CDH17-202ENST00000441892 ICE2Q659A1 982 aa9.49□□□□□ -0.89
CDH17-202ENST00000441892 RASEFQ8IZ41 740 aa9.49□□□□□ -0.89
CDH17-202ENST00000441892 TXLNBQ8N3L3 684 aa9.49□□□□□ -0.89
CDH17-202ENST00000441892 NCAPGQ9BPX3 1015 aa9.49□□□□□ -0.89
CDH17-202ENST00000441892 CLTCL1P53675 1640 aa9.49□□□□□ -0.89
CDH17-202ENST00000441892 MX1P20591 662 aa9.48□□□□□ -0.89
CDH17-202ENST00000441892 BMS1Q14692 1282 aaKnown RBP9.48□□□□□ -0.89
CDH17-202ENST00000441892 RNF20Q5VTR2 975 aa9.48□□□□□ -0.89
CDH17-202ENST00000441892 LOC102724159A0A0B4J2E5 919 aa9.48□□□□□ -0.89
CDH17-202ENST00000441892 CASQ1P31415 396 aa9.48□□□□□ -0.89
CDH17-202ENST00000441892 NAA30Q147X3 362 aaPredicted RBP9.48□□□□□ -0.89
CDH17-202ENST00000441892 PWP2Q15269 919 aaKnown RBP9.48□□□□□ -0.89
CDH17-202ENST00000441892 RGL3Q3MIN7 710 aa9.48□□□□□ -0.89
CDH17-202ENST00000441892 TMEM57Q8N5G2 664 aa9.48□□□□□ -0.89
CDH17-202ENST00000441892 TMEM87AQ8NBN3 555 aa9.48□□□□□ -0.89
CDH17-202ENST00000441892 SLC26A8Q96RN1 970 aa9.48□□□□□ -0.89
CDH17-202ENST00000441892 RRP7AQ9Y3A4 280 aaKnown RBP9.48□□□□□ -0.89
CDH17-202ENST00000441892 MCM2P49736 904 aa9.47□□□□□ -0.89
CDH17-202ENST00000441892 MNX1P50219 401 aaPredicted RBP9.47□□□□□ -0.89
CDH17-202ENST00000441892 TEX35Q5T0J7 233 aa9.47□□□□□ -0.89
CDH17-202ENST00000441892 CHMP4CQ96CF2 233 aa9.47□□□□□ -0.89
CDH17-202ENST00000441892 C16orf45Q96MC5 204 aaPredicted RBP9.47□□□□□ -0.89
CDH17-202ENST00000441892 SGIP1Q9BQI5 828 aa9.47□□□□□ -0.89
CDH17-202ENST00000441892 VWDEQ8N2E2 1590 aa9.47□□□□□ -0.89
CDH17-202ENST00000441892 ABCC3O15438 1527 aa9.47□□□□□ -0.89
CDH17-202ENST00000441892 IPO8O15397 1037 aaKnown RBP9.47□□□□□ -0.89
CDH17-202ENST00000441892 FBXO38Q6PIJ6 1188 aa9.47□□□□□ -0.89
CDH17-202ENST00000441892 SIRT1Q96EB6 747 aa9.47□□□□□ -0.89
CDH17-202ENST00000441892 ERO1AQ96HE7 468 aa9.47□□□□□ -0.89
CDH17-202ENST00000441892 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.47□□□□□ -0.89
CDH17-202ENST00000441892 UNC13BO14795 1591 aa9.46□□□□□ -0.89
CDH17-202ENST00000441892 GADD45BO75293 160 aaPredicted RBP9.46□□□□□ -0.89
CDH17-202ENST00000441892 GUCY2CP25092 1073 aa9.46□□□□□ -0.89
CDH17-202ENST00000441892 FBXO31Q5XUX0 539 aaPredicted RBP9.46□□□□□ -0.89
CDH17-202ENST00000441892 INTS3Q68E01 1043 aaKnown RBP9.46□□□□□ -0.89
CDH17-202ENST00000441892 USP48Q86UV5 1035 aa9.46□□□□□ -0.89
CDH17-202ENST00000441892 INTS4Q96HW7 963 aaKnown RBP9.46□□□□□ -0.89
CDH17-202ENST00000441892 FUCA2Q9BTY2 467 aa9.46□□□□□ -0.89
CDH17-202ENST00000441892 ST7Q9NRC1 585 aa9.46□□□□□ -0.89
CDH17-202ENST00000441892 NOS1P29475 1434 aa9.46□□□□□ -0.9
CDH17-202ENST00000441892 MYO1CO00159 1063 aa9.46□□□□□ -0.9
CDH17-202ENST00000441892 AP5Z1O43299 807 aa9.46□□□□□ -0.9
CDH17-202ENST00000441892 HTATSF1O43719 755 aaKnown RBP9.46□□□□□ -0.9
CDH17-202ENST00000441892 LMOD3Q0VAK6 560 aa9.46□□□□□ -0.9
CDH17-202ENST00000441892 FOXD4L5Q5VV16 416 aaPredicted RBP9.46□□□□□ -0.9
CDH17-202ENST00000441892 SPC24Q8NBT2 197 aa9.46□□□□□ -0.9
CDH17-202ENST00000441892 FOXD4L4Q8WXT5 416 aaPredicted RBP9.46□□□□□ -0.9
CDH17-202ENST00000441892 SSH1Q8WYL5 1049 aa9.46□□□□□ -0.9
CDH17-202ENST00000441892 IFT57Q9NWB7 429 aa9.46□□□□□ -0.9
CDH17-202ENST00000441892 NOB1Q9ULX3 412 aaKnown RBP9.46□□□□□ -0.9
CDH17-202ENST00000441892 ATAD2Q6PL18 1390 aa9.45□□□□□ -0.9
CDH17-202ENST00000441892 MROH2AA6NES4 1674 aa9.45□□□□□ -0.9
CDH17-202ENST00000441892 MYOM1P52179 1685 aa9.45□□□□□ -0.9
CDH17-202ENST00000441892 GSPT1P15170 499 aaKnown RBP9.45□□□□□ -0.9
CDH17-202ENST00000441892 PTGS1P23219 599 aa9.45□□□□□ -0.9
CDH17-202ENST00000441892 DSG3P32926 999 aa9.45□□□□□ -0.9
CDH17-202ENST00000441892 CUL4AQ13619 759 aa9.45□□□□□ -0.9
CDH17-202ENST00000441892 CEP135Q66GS9 1140 aa9.45□□□□□ -0.9
CDH17-202ENST00000441892 ZNF446Q9NWS9 450 aa9.45□□□□□ -0.9
CDH17-202ENST00000441892 CWC15Q9P013 229 aaKnown RBP9.45□□□□□ -0.9
CDH17-202ENST00000441892 POLKQ9UBT6 870 aa9.45□□□□□ -0.9
CDH17-202ENST00000441892 CAMSAP1Q5T5Y3 1602 aa9.45□□□□□ -0.9
CDH17-202ENST00000441892 PPIP5K1Q6PFW1 1433 aa9.44□□□□□ -0.9
CDH17-202ENST00000441892 TPM4P67936 248 aa9.44□□□□□ -0.9
CDH17-202ENST00000441892 SYT10Q6XYQ8 523 aa9.44□□□□□ -0.9
CDH17-202ENST00000441892 GOLGA6L1Q8N7Z2 621 aa9.44□□□□□ -0.9
CDH17-202ENST00000441892 TMX3Q96JJ7 454 aa9.44□□□□□ -0.9
CDH17-202ENST00000441892 ZNF215Q9UL58 517 aaPredicted RBP9.44□□□□□ -0.9
CDH17-202ENST00000441892 SHPRHQ149N8 1683 aa9.44□□□□□ -0.9
CDH17-202ENST00000441892 ABCC11Q96J66 1382 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms