RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 TMOD3Q9NYL9 352 aa14.01□□□□□ -0.17
SYN3-204ENST00000441821 ASAP1Q9ULH1 1129 aa14.01□□□□□ -0.17
SYN3-204ENST00000441821 N4BP2Q86UW6 1770 aaPredicted RBP14.01□□□□□ -0.17
SYN3-204ENST00000441821 WDR90Q96KV7 1748 aa14.01□□□□□ -0.17
SYN3-204ENST00000441821 C10orf71Q711Q0 1435 aa14□□□□□ -0.17
SYN3-204ENST00000441821 TMF1P82094 1093 aa14□□□□□ -0.17
SYN3-204ENST00000441821 TRAPPC3LQ5T215 181 aa14□□□□□ -0.17
SYN3-204ENST00000441821 JMYQ8N9B5 988 aa14□□□□□ -0.17
SYN3-204ENST00000441821 KLRG1Q96E93 195 aa14□□□□□ -0.17
SYN3-204ENST00000441821 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14□□□□□ -0.173e-8■■■□□ 17.5
SYN3-204ENST00000441821 FSTL1Q12841 308 aa13.99□□□□□ -0.17
SYN3-204ENST00000441821 RTCBQ9Y3I0 505 aaKnown RBP13.99□□□□□ -0.17
SYN3-204ENST00000441821 FCHSD2O94868 740 aa13.98□□□□□ -0.17
SYN3-204ENST00000441821 DPEP1P16444 411 aa13.98□□□□□ -0.17
SYN3-204ENST00000441821 COL13A1Q5TAT6 717 aaPredicted RBP13.98□□□□□ -0.17
SYN3-204ENST00000441821 C16orf71Q8IYS4 520 aaPredicted RBP13.98□□□□□ -0.17
SYN3-204ENST00000441821 ATG3Q9NT62 314 aa13.98□□□□□ -0.17
SYN3-204ENST00000441821 CCDC87Q9NVE4 849 aa13.98□□□□□ -0.17
SYN3-204ENST00000441821 TONSLQ96HA7 1378 aa13.97□□□□□ -0.17
SYN3-204ENST00000441821 PLEKHG2Q9H7P9 1386 aa13.97□□□□□ -0.17
SYN3-204ENST00000441821 KIF20BQ96Q89 1820 aa13.97□□□□□ -0.17
SYN3-204ENST00000441821 ADRA2BP18089 450 aa13.97□□□□□ -0.17
SYN3-204ENST00000441821 C9orf131Q5VYM1 1079 aa13.97□□□□□ -0.17
SYN3-204ENST00000441821 IFNL2Q8IZJ0 200 aa13.97□□□□□ -0.17
SYN3-204ENST00000441821 EMILIN1Q9Y6C2 1016 aa13.97□□□□□ -0.17
SYN3-204ENST00000441821 C4AP0C0L4 1744 aa13.96□□□□□ -0.17
SYN3-204ENST00000441821 BRCA1P38398 1863 aaKnown RBP13.96□□□□□ -0.17
SYN3-204ENST00000441821 PHKG2P15735 406 aa13.96□□□□□ -0.17
SYN3-204ENST00000441821 KCNA3P22001 575 aa13.96□□□□□ -0.17
SYN3-204ENST00000441821 HTRA3P83110 453 aa13.96□□□□□ -0.17
SYN3-204ENST00000441821 RC3H1Q5TC82 1133 aaKnown RBP13.96□□□□□ -0.17
SYN3-204ENST00000441821 ARHGEF1Q92888 912 aaKnown RBP13.96□□□□□ -0.17
SYN3-204ENST00000441821 KDM2BQ8NHM5 1336 aa13.95□□□□□ -0.18
SYN3-204ENST00000441821 ZNF831Q5JPB2 1677 aa13.95□□□□□ -0.18
SYN3-204ENST00000441821 GYS1P13807 737 aa13.95□□□□□ -0.18
SYN3-204ENST00000441821 EYA1Q99502 592 aa13.95□□□□□ -0.18
SYN3-204ENST00000441821 PARP3Q9Y6F1 533 aa13.95□□□□□ -0.18
SYN3-204ENST00000441821 KDRP35968 1356 aa13.95□□□□□ -0.18
SYN3-204ENST00000441821 WASHC2AQ641Q2 1341 aa13.94□□□□□ -0.18
SYN3-204ENST00000441821 RFC4P35249 363 aa13.94□□□□□ -0.18
SYN3-204ENST00000441821 SLC4A9Q96Q91 983 aa13.94□□□□□ -0.18
SYN3-204ENST00000441821 PIM2Q9P1W9 311 aa13.94□□□□□ -0.18
SYN3-204ENST00000441821 ARFGEF1Q9Y6D6 1849 aa13.94□□□□□ -0.18
SYN3-204ENST00000441821 CNTNAP4Q9C0A0 1308 aa13.93□□□□□ -0.18
SYN3-204ENST00000441821 PPM1GO15355 546 aaPredicted RBP13.93□□□□□ -0.18
SYN3-204ENST00000441821 RPS6KA4O75676 772 aa13.93□□□□□ -0.18
SYN3-204ENST00000441821 DCAF5Q96JK2 942 aa13.93□□□□□ -0.18
SYN3-204ENST00000441821 KCPQ6ZWJ8 1503 aa13.93□□□□□ -0.18
SYN3-204ENST00000441821 ANKRD26Q9UPS8 1709 aa13.93□□□□□ -0.18
SYN3-204ENST00000441821 ERVV-2B6SEH9 535 aa13.92□□□□□ -0.18
SYN3-204ENST00000441821 PRELPP51888 382 aa13.92□□□□□ -0.18
SYN3-204ENST00000441821 CDCA8Q53HL2 280 aa13.92□□□□□ -0.18
SYN3-204ENST00000441821 DALRD3Q5D0E6 543 aaKnown RBP13.92□□□□□ -0.18
SYN3-204ENST00000441821 TNS4Q8IZW8 715 aa13.92□□□□□ -0.18
SYN3-204ENST00000441821 RBM42Q9BTD8 480 aaKnown RBP13.92□□□□□ -0.18
SYN3-204ENST00000441821 CARD14Q9BXL6 1004 aa13.92□□□□□ -0.18
SYN3-204ENST00000441821 RRAGCQ9HB90 399 aa13.92□□□□□ -0.18
SYN3-204ENST00000441821 COL5A3P25940 1745 aaPredicted RBP13.91□□□□□ -0.18
SYN3-204ENST00000441821 CAPN15O75808 1086 aa13.91□□□□□ -0.18
SYN3-204ENST00000441821 RNF181Q9P0P0 153 aa13.91□□□□□ -0.18
SYN3-204ENST00000441821 SMC1BQ8NDV3 1235 aa13.9□□□□□ -0.18
SYN3-204ENST00000441821 TNRC6CQ9HCJ0 1690 aaKnown RBP13.9□□□□□ -0.18
SYN3-204ENST00000441821 HSP90AB1P08238 724 aaKnown RBP13.89□□□□□ -0.19
SYN3-204ENST00000441821 POLKQ9UBT6 870 aa13.88□□□□□ -0.19
SYN3-204ENST00000441821 ZC3H4Q9UPT8 1303 aaKnown RBP13.88□□□□□ -0.19
SYN3-204ENST00000441821 SBF1O95248 1867 aa13.87□□□□□ -0.19
SYN3-204ENST00000441821 MYH14Q7Z406 1995 aaKnown RBP13.86□□□□□ -0.19
SYN3-204ENST00000441821 DDR1Q08345 913 aa13.86□□□□□ -0.19
SYN3-204ENST00000441821 EIF4A2Q14240 407 aaKnown RBP13.86□□□□□ -0.19
SYN3-204ENST00000441821 FKBP8Q14318 412 aa13.86□□□□□ -0.19
SYN3-204ENST00000441821 USP42Q9H9J4 1324 aaKnown RBP13.86□□□□□ -0.19
SYN3-204ENST00000441821 CHRNA5P30532 468 aa13.85□□□□□ -0.19
SYN3-204ENST00000441821 CABP4P57796 275 aa13.85□□□□□ -0.19
SYN3-204ENST00000441821 SRP68Q9UHB9 627 aaKnown RBP13.85□□□□□ -0.19
SYN3-204ENST00000441821 KDM6AO15550 1401 aaPredicted RBP13.84□□□□□ -0.19
SYN3-204ENST00000441821 VEGFAP15692 232 aaPredicted RBP13.84□□□□□ -0.19
SYN3-204ENST00000441821 TM4SF1P30408 202 aa13.84□□□□□ -0.19
SYN3-204ENST00000441821 CRKLP46109 303 aaKnown RBP13.84□□□□□ -0.19
SYN3-204ENST00000441821 PLEKHO1Q53GL0 409 aaPredicted RBP13.84□□□□□ -0.19
SYN3-204ENST00000441821 GLTPD2A6NH11 291 aa13.83□□□□□ -0.2
SYN3-204ENST00000441821 POLRMTO00411 1230 aaKnown RBP13.83□□□□□ -0.2
SYN3-204ENST00000441821 PTCD1O75127 700 aaKnown RBP13.83□□□□□ -0.2
SYN3-204ENST00000441821 HSPA1AP0DMV8 641 aaKnown RBP13.83□□□□□ -0.2
SYN3-204ENST00000441821 HSPA1BP0DMV9 641 aaKnown RBP13.83□□□□□ -0.2
SYN3-204ENST00000441821 LMNB1P20700 586 aa13.82□□□□□ -0.2
SYN3-204ENST00000441821 AMOTQ4VCS5 1084 aa13.82□□□□□ -0.2
SYN3-204ENST00000441821 ZNF530Q6P9A1 599 aaPredicted RBP13.82□□□□□ -0.2
SYN3-204ENST00000441821 MTHFSP49914 203 aa13.81□□□□□ -0.2
SYN3-204ENST00000441821 RASSF7Q02833 373 aa13.81□□□□□ -0.2
SYN3-204ENST00000441821 INTS5Q6P9B9 1019 aaKnown RBP13.81□□□□□ -0.2
SYN3-204ENST00000441821 ADAMTS7Q9UKP4 1686 aa13.8□□□□□ -0.2
SYN3-204ENST00000441821 ZPR1O75312 459 aa13.8□□□□□ -0.2
SYN3-204ENST00000441821 NFATC2IPQ8NCF5 419 aa13.8□□□□□ -0.2
SYN3-204ENST00000441821 TJP1Q07157 1748 aa13.79□□□□□ -0.2
SYN3-204ENST00000441821 USPL1Q5W0Q7 1092 aa13.79□□□□□ -0.2
SYN3-204ENST00000441821 TNNT2P45379 298 aaPredicted RBP13.78□□□□□ -0.2
SYN3-204ENST00000441821 C1orf141Q5JVX7 400 aa13.78□□□□□ -0.2
SYN3-204ENST00000441821 TTLL6Q8N841 843 aa13.78□□□□□ -0.2
SYN3-204ENST00000441821 POTECB2RU33 542 aa13.77□□□□□ -0.21
SYN3-204ENST00000441821 SOS1Q07889 1333 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms