RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 SNRPNP63162 240 aaKnown RBP7.3□□□□□ -1.24
HMGB3P9-201ENST00000441799 UBAP2LQ14157 1087 aaKnown RBP7.3□□□□□ -1.24
HMGB3P9-201ENST00000441799 C1orf229Q6ZS94 237 aaPredicted RBP7.3□□□□□ -1.24
HMGB3P9-201ENST00000441799 TAS1R3Q7RTX0 852 aa7.3□□□□□ -1.24
HMGB3P9-201ENST00000441799 RAB6BQ9NRW1 208 aa7.3□□□□□ -1.24
HMGB3P9-201ENST00000441799 HRH3Q9Y5N1 445 aa7.3□□□□□ -1.24
HMGB3P9-201ENST00000441799 SHISA8B8ZZ34 492 aa7.29□□□□□ -1.24
HMGB3P9-201ENST00000441799 CENPCQ03188 943 aa7.29□□□□□ -1.24
HMGB3P9-201ENST00000441799 IL27Q8NEV9 243 aa7.29□□□□□ -1.24
HMGB3P9-201ENST00000441799 CDCA7Q9BWT1 371 aaPredicted RBP7.29□□□□□ -1.24
HMGB3P9-201ENST00000441799 CFHR5Q9BXR6 569 aa7.29□□□□□ -1.24
HMGB3P9-201ENST00000441799 PODNQ7Z5L7 613 aa7.28□□□□□ -1.24
HMGB3P9-201ENST00000441799 CNKSR1Q969H4 720 aa7.28□□□□□ -1.24
HMGB3P9-201ENST00000441799 KLRG1Q96E93 195 aa7.28□□□□□ -1.24
HMGB3P9-201ENST00000441799 ESYT1Q9BSJ8 1104 aa7.28□□□□□ -1.24
HMGB3P9-201ENST00000441799 OXCT2Q9BYC2 517 aaPredicted RBP7.28□□□□□ -1.24
HMGB3P9-201ENST00000441799 GNRH1P01148 92 aa7.27□□□□□ -1.25
HMGB3P9-201ENST00000441799 PHKA2P46019 1235 aa7.27□□□□□ -1.25
HMGB3P9-201ENST00000441799 XAGE2Q96GT9 111 aa7.27□□□□□ -1.25
HMGB3P9-201ENST00000441799 FHDC1Q9C0D6 1143 aaPredicted RBP7.27□□□□□ -1.25
HMGB3P9-201ENST00000441799 GPAMQ9HCL2 828 aa7.27□□□□□ -1.25
HMGB3P9-201ENST00000441799 KRBA1A5PL33 1030 aa7.26□□□□□ -1.25
HMGB3P9-201ENST00000441799 MAP2K3P46734 347 aa7.26□□□□□ -1.25
HMGB3P9-201ENST00000441799 TSGA10IPQ3SY00 556 aa7.26□□□□□ -1.25
HMGB3P9-201ENST00000441799 XP32Q5T750 250 aa7.26□□□□□ -1.25
HMGB3P9-201ENST00000441799 MTMR14Q8NCE2 650 aa7.26□□□□□ -1.25
HMGB3P9-201ENST00000441799 CCDC85AQ96PX6 553 aaPredicted RBP7.26□□□□□ -1.25
HMGB3P9-201ENST00000441799 CEP126Q9P2H0 1117 aa7.26□□□□□ -1.25
HMGB3P9-201ENST00000441799 NSFL1CQ9UNZ2 370 aaKnown RBP7.26□□□□□ -1.25
HMGB3P9-201ENST00000441799 C2CD2LO14523 706 aa7.25□□□□□ -1.25
HMGB3P9-201ENST00000441799 HOXB4P17483 251 aaPredicted RBP7.25□□□□□ -1.25
HMGB3P9-201ENST00000441799 COL8A1P27658 744 aa7.25□□□□□ -1.25
HMGB3P9-201ENST00000441799 GALNT6Q8NCL4 622 aa7.25□□□□□ -1.25
HMGB3P9-201ENST00000441799 BANK1Q8NDB2 785 aa7.25□□□□□ -1.25
HMGB3P9-201ENST00000441799 PDIA4P13667 645 aaKnown RBP7.24□□□□□ -1.25
HMGB3P9-201ENST00000441799 ZSCAN10Q96SZ4 725 aaPredicted RBP7.24□□□□□ -1.25
HMGB3P9-201ENST00000441799 SNRKQ9NRH2 765 aa7.24□□□□□ -1.25
HMGB3P9-201ENST00000441799 ABCC9O60706 1549 aa7.23□□□□□ -1.25
HMGB3P9-201ENST00000441799 A0A1B0GTH6 734 aa7.23□□□□□ -1.25
HMGB3P9-201ENST00000441799 SOCS7O14512 581 aa7.23□□□□□ -1.25
HMGB3P9-201ENST00000441799 MSX1P28360 303 aa7.23□□□□□ -1.25
HMGB3P9-201ENST00000441799 C4orf17Q53FE4 359 aa7.23□□□□□ -1.25
HMGB3P9-201ENST00000441799 LINC00114Q6XXX2 140 aa7.23□□□□□ -1.25
HMGB3P9-201ENST00000441799 C14orf37Q86TY3 774 aa7.23□□□□□ -1.25
HMGB3P9-201ENST00000441799 ESF1Q9H501 851 aaKnown RBP7.23□□□□□ -1.25
HMGB3P9-201ENST00000441799 RUBCNLQ9H714 662 aa7.23□□□□□ -1.25
HMGB3P9-201ENST00000441799 STAU1O95793 577 aaKnown RBP7.22□□□□□ -1.25
HMGB3P9-201ENST00000441799 PHTF2Q8N3S3 785 aa7.22□□□□□ -1.25
HMGB3P9-201ENST00000441799 EDARADDQ8WWZ3 215 aa7.22□□□□□ -1.25
HMGB3P9-201ENST00000441799 ZNF592Q92610 1267 aa7.22□□□□□ -1.25
HMGB3P9-201ENST00000441799 NDFIP2Q9NV92 336 aa7.22□□□□□ -1.25
HMGB3P9-201ENST00000441799 ZNF330Q9Y3S2 320 aaPredicted RBP7.22□□□□□ -1.25
HMGB3P9-201ENST00000441799 NDUFB9Q9Y6M9 179 aa7.22□□□□□ -1.25
HMGB3P9-201ENST00000441799 CTBSQ01459 385 aa7.21□□□□□ -1.26
HMGB3P9-201ENST00000441799 NEUROD2Q15784 382 aa7.21□□□□□ -1.26
HMGB3P9-201ENST00000441799 TMEM132AQ24JP5 1023 aa7.21□□□□□ -1.26
HMGB3P9-201ENST00000441799 PHF24Q9UPV7 400 aa7.21□□□□□ -1.26
HMGB3P9-201ENST00000441799 BNIP3LO60238 219 aa7.2□□□□□ -1.26
HMGB3P9-201ENST00000441799 BAG6P46379 1132 aa7.2□□□□□ -1.26
HMGB3P9-201ENST00000441799 LBRQ14739 615 aaKnown RBP7.2□□□□□ -1.26
HMGB3P9-201ENST00000441799 TMEM214Q6NUQ4 689 aaKnown RBP7.2□□□□□ -1.26
HMGB3P9-201ENST00000441799 ABHD17AQ96GS6 310 aa7.2□□□□□ -1.26
HMGB3P9-201ENST00000441799 SUV39H2Q9H5I1 410 aa7.2□□□□□ -1.26
HMGB3P9-201ENST00000441799 GDF2Q9UK05 429 aaPredicted RBP7.2□□□□□ -1.26
HMGB3P9-201ENST00000441799 MKL2Q9ULH7 1088 aa7.2□□□□□ -1.26
HMGB3P9-201ENST00000441799 MYCP01106 439 aaPredicted RBP7.19□□□□□ -1.26
HMGB3P9-201ENST00000441799 GNASQ5JWF2 1037 aa7.19□□□□□ -1.26
HMGB3P9-201ENST00000441799 ETNK1Q9HBU6 452 aa7.19□□□□□ -1.26
HMGB3P9-201ENST00000441799 HCN2Q9UL51 889 aa7.19□□□□□ -1.26
HMGB3P9-201ENST00000441799 ATXN7L1Q9ULK2 861 aaPredicted RBP7.19□□□□□ -1.26
HMGB3P9-201ENST00000441799 K7ELQ4 463 aaPredicted RBP7.18□□□□□ -1.26
HMGB3P9-201ENST00000441799 BMP4P12644 408 aa7.18□□□□□ -1.26
HMGB3P9-201ENST00000441799 PPARGC1BQ86YN6 1023 aaKnown RBP7.18□□□□□ -1.26
HMGB3P9-201ENST00000441799 GOLGA6L1Q8N7Z2 621 aa7.18□□□□□ -1.26
HMGB3P9-201ENST00000441799 RRAGCQ9HB90 399 aa7.18□□□□□ -1.26
HMGB3P9-201ENST00000441799 CSB-PGBD3P0DP91 1061 aa7.17□□□□□ -1.26
HMGB3P9-201ENST00000441799 ESCO1Q5FWF5 840 aa7.17□□□□□ -1.26
HMGB3P9-201ENST00000441799 PGBD3Q8N328 593 aa7.17□□□□□ -1.26
HMGB3P9-201ENST00000441799 RHBDD1Q8TEB9 315 aa7.17□□□□□ -1.26
HMGB3P9-201ENST00000441799 BTBD6Q96KE9 485 aa7.17□□□□□ -1.26
HMGB3P9-201ENST00000441799 CRISPLD1Q9H336 500 aa7.17□□□□□ -1.26
HMGB3P9-201ENST00000441799 DNAAF2Q9NVR5 837 aaKnown RBP7.17□□□□□ -1.26
HMGB3P9-201ENST00000441799 GGA1Q9UJY5 639 aa7.17□□□□□ -1.26
HMGB3P9-201ENST00000441799 FURINP09958 794 aa7.16□□□□□ -1.26
HMGB3P9-201ENST00000441799 FGFR3P22607 806 aa7.16□□□□□ -1.26
HMGB3P9-201ENST00000441799 EFHC2Q5JST6 749 aa7.16□□□□□ -1.26
HMGB3P9-201ENST00000441799 SLCO4C1Q6ZQN7 724 aa7.16□□□□□ -1.26
HMGB3P9-201ENST00000441799 ALYREFQ86V81 257 aaKnown RBP7.16□□□□□ -1.26
HMGB3P9-201ENST00000441799 CHIC2Q9UKJ5 165 aa7.16□□□□□ -1.26
HMGB3P9-201ENST00000441799 BRPF1P55201 1214 aaPredicted RBP7.15□□□□□ -1.26
HMGB3P9-201ENST00000441799 USP4Q13107 963 aa7.15□□□□□ -1.26
HMGB3P9-201ENST00000441799 IRF5Q13568 498 aa7.15□□□□□ -1.26
HMGB3P9-201ENST00000441799 TBC1D2BQ9UPU7 963 aa7.15□□□□□ -1.26
HMGB3P9-201ENST00000441799 EPXP11678 715 aa7.14□□□□□ -1.27
HMGB3P9-201ENST00000441799 GTF2E1P29083 439 aaPredicted RBP7.14□□□□□ -1.27
HMGB3P9-201ENST00000441799 SCNN1DP51172 638 aa7.14□□□□□ -1.27
HMGB3P9-201ENST00000441799 GRIN2CQ14957 1233 aa7.14□□□□□ -1.27
HMGB3P9-201ENST00000441799 ZCCHC2Q9C0B9 1178 aaKnown RBP7.14□□□□□ -1.27
HMGB3P9-201ENST00000441799 KLF15Q9UIH9 416 aa7.14□□□□□ -1.27
HMGB3P9-201ENST00000441799 DOLKQ9UPQ8 538 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms