RNA–Protein interactions for RNA: ENST00000441759.1

AP000959.1-201, humanhuman

TSL 3 BASIC

Gene AP000959.1, Length 977 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000959.1-201ENST00000441759 EIF4A2Q14240 407 aaKnown RBP17.23■□□□□ 0.35
AP000959.1-201ENST00000441759 NKX1-1Q15270 411 aaPredicted RBP17.23■□□□□ 0.35
AP000959.1-201ENST00000441759 SPG7Q9UQ90 795 aa17.23■□□□□ 0.35
AP000959.1-201ENST00000441759 PLEKHG2Q9H7P9 1386 aa17.23■□□□□ 0.35
AP000959.1-201ENST00000441759 MPRIPQ6WCQ1 1025 aa17.22■□□□□ 0.35
AP000959.1-201ENST00000441759 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.22■□□□□ 0.35
AP000959.1-201ENST00000441759 IGSF1Q8N6C5 1336 aa17.21■□□□□ 0.34
AP000959.1-201ENST00000441759 PRKAR2AP13861 404 aaKnown RBP17.2■□□□□ 0.34
AP000959.1-201ENST00000441759 POLD1P28340 1107 aa17.2■□□□□ 0.34
AP000959.1-201ENST00000441759 COL23A1Q86Y22 540 aaPredicted RBP17.19■□□□□ 0.34
AP000959.1-201ENST00000441759 PIGBQ92521 554 aa17.19■□□□□ 0.34
AP000959.1-201ENST00000441759 SMARCC1Q92922 1105 aaPredicted RBP17.19■□□□□ 0.34
AP000959.1-201ENST00000441759 ZNF831Q5JPB2 1677 aa17.18■□□□□ 0.34
AP000959.1-201ENST00000441759 PHKG2P15735 406 aa17.18■□□□□ 0.34
AP000959.1-201ENST00000441759 IFNL2Q8IZJ0 200 aa17.17■□□□□ 0.34
AP000959.1-201ENST00000441759 HMGB2P26583 209 aaKnown RBP17.16■□□□□ 0.34
AP000959.1-201ENST00000441759 VIRMAQ69YN4 1812 aaKnown RBP17.16■□□□□ 0.34
AP000959.1-201ENST00000441759 COL5A3P25940 1745 aaPredicted RBP17.16■□□□□ 0.34
AP000959.1-201ENST00000441759 MORC1Q86VD1 984 aa17.15■□□□□ 0.34
AP000959.1-201ENST00000441759 KLHL34Q8N239 644 aa17.15■□□□□ 0.34
AP000959.1-201ENST00000441759 TMOD3Q9NYL9 352 aa17.15■□□□□ 0.34
AP000959.1-201ENST00000441759 ATXN8OSP0DMR3 200 aa17.14■□□□□ 0.33
AP000959.1-201ENST00000441759 FLAD1Q8NFF5 587 aa17.14■□□□□ 0.33
AP000959.1-201ENST00000441759 SCN11AQ9UI33 1791 aa17.14■□□□□ 0.33
AP000959.1-201ENST00000441759 KIF7Q2M1P5 1343 aa17.14■□□□□ 0.33
AP000959.1-201ENST00000441759 MSL1Q68DK7 614 aa17.13■□□□□ 0.33
AP000959.1-201ENST00000441759 CLEC11AQ9Y240 323 aa17.13■□□□□ 0.33
AP000959.1-201ENST00000441759 KNSTRNQ9Y448 316 aa17.13■□□□□ 0.33
AP000959.1-201ENST00000441759 KDM6AO15550 1401 aaPredicted RBP17.13■□□□□ 0.33
AP000959.1-201ENST00000441759 LOC102724428A0A0B4J2F2 783 aa17.12■□□□□ 0.33
AP000959.1-201ENST00000441759 SIK1P57059 783 aa17.12■□□□□ 0.33
AP000959.1-201ENST00000441759 AMIGO3Q86WK7 504 aa17.12■□□□□ 0.33
AP000959.1-201ENST00000441759 NLGN2Q8NFZ4 835 aa17.12■□□□□ 0.33
AP000959.1-201ENST00000441759 AK7Q96M32 723 aa17.12■□□□□ 0.33
AP000959.1-201ENST00000441759 ASAP1Q9ULH1 1129 aa17.12■□□□□ 0.33
AP000959.1-201ENST00000441759 KDRP35968 1356 aa17.12■□□□□ 0.33
AP000959.1-201ENST00000441759 C19orf67A6NJJ6 358 aa17.11■□□□□ 0.33
AP000959.1-201ENST00000441759 AMER1Q5JTC6 1135 aaPredicted RBP17.11■□□□□ 0.33
AP000959.1-201ENST00000441759 LINC00116Q8NCU8 138 aa17.11■□□□□ 0.33
AP000959.1-201ENST00000441759 ITPK1Q13572 414 aa17.1■□□□□ 0.33
AP000959.1-201ENST00000441759 AEBP1Q8IUX7 1158 aa17.1■□□□□ 0.33
AP000959.1-201ENST00000441759 ATG3Q9NT62 314 aa17.1■□□□□ 0.33
AP000959.1-201ENST00000441759 CICQ96RK0 1608 aaPredicted RBP17.1■□□□□ 0.33
AP000959.1-201ENST00000441759 GPR162Q16538 588 aa17.09■□□□□ 0.33
AP000959.1-201ENST00000441759 PLEKHO1Q53GL0 409 aaPredicted RBP17.09■□□□□ 0.33
AP000959.1-201ENST00000441759 C4AP0C0L4 1744 aa17.08■□□□□ 0.32
AP000959.1-201ENST00000441759 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.08■□□□□ 0.32
AP000959.1-201ENST00000441759 ERVV-2B6SEH9 535 aa17.08■□□□□ 0.32
AP000959.1-201ENST00000441759 PHF14O94880 888 aa17.08■□□□□ 0.32
AP000959.1-201ENST00000441759 HSP90AB1P08238 724 aaKnown RBP17.08■□□□□ 0.32
AP000959.1-201ENST00000441759 SSFA2P28290 1259 aa17.08■□□□□ 0.32
AP000959.1-201ENST00000441759 AMOTQ4VCS5 1084 aa17.08■□□□□ 0.32
AP000959.1-201ENST00000441759 ZNF530Q6P9A1 599 aaPredicted RBP17.08■□□□□ 0.32
AP000959.1-201ENST00000441759 SMIM5Q71RC9 77 aa17.08■□□□□ 0.32
AP000959.1-201ENST00000441759 SPDYE1Q8NFV5 336 aaPredicted RBP17.08■□□□□ 0.32
AP000959.1-201ENST00000441759 DCAF5Q96JK2 942 aa17.08■□□□□ 0.32
AP000959.1-201ENST00000441759 MYH14Q7Z406 1995 aaKnown RBP17.08■□□□□ 0.32
AP000959.1-201ENST00000441759 TJP1Q07157 1748 aa17.07■□□□□ 0.32
AP000959.1-201ENST00000441759 IL13P35225 146 aa17.07■□□□□ 0.32
AP000959.1-201ENST00000441759 ATP6V1AP38606 617 aa17.07■□□□□ 0.32
AP000959.1-201ENST00000441759 ZNF784Q8NCA9 323 aaPredicted RBP17.07■□□□□ 0.32
AP000959.1-201ENST00000441759 UTRNP46939 3433 aa17.06■□□□□ 0.32
AP000959.1-201ENST00000441759 KIF13BQ9NQT8 1826 aa17.06■□□□□ 0.32
AP000959.1-201ENST00000441759 SULT6B1Q6IMI4 303 aa17.06■□□□□ 0.32
AP000959.1-201ENST00000441759 PELP1Q8IZL8 1130 aaKnown RBP17.06■□□□□ 0.32
AP000959.1-201ENST00000441759 GNPATO15228 680 aa17.05■□□□□ 0.32
AP000959.1-201ENST00000441759 ADAMTS7Q9UKP4 1686 aa17.04■□□□□ 0.32
AP000959.1-201ENST00000441759 PER1O15534 1290 aaPredicted RBP17.04■□□□□ 0.32
AP000959.1-201ENST00000441759 SLC4A9Q96Q91 983 aa17.04■□□□□ 0.32
AP000959.1-201ENST00000441759 CD2APQ9Y5K6 639 aa17.04■□□□□ 0.32
AP000959.1-201ENST00000441759 KIAA1551Q9HCM1 1747 aa17.04■□□□□ 0.32
AP000959.1-201ENST00000441759 YBX3P16989 372 aaKnown RBP eCLIP17.03■□□□□ 0.32
AP000959.1-201ENST00000441759 CABP4P57796 275 aa17.03■□□□□ 0.32
AP000959.1-201ENST00000441759 C1orf141Q5JVX7 400 aa17.03■□□□□ 0.32
AP000959.1-201ENST00000441759 MRC1P22897 1456 aa17.02■□□□□ 0.32
AP000959.1-201ENST00000441759 GABBR2O75899 941 aa17.02■□□□□ 0.32
AP000959.1-201ENST00000441759 MTHFSP49914 203 aa17.02■□□□□ 0.32
AP000959.1-201ENST00000441759 COL3A1P02461 1466 aaPredicted RBP17.01■□□□□ 0.31
AP000959.1-201ENST00000441759 MKRN4PQ13434 485 aaPredicted RBP17.01■□□□□ 0.31
AP000959.1-201ENST00000441759 NPC1L1Q9UHC9 1359 aa17.01■□□□□ 0.31
AP000959.1-201ENST00000441759 CNTNAP4Q9C0A0 1308 aa17■□□□□ 0.31
AP000959.1-201ENST00000441759 N4BP2Q86UW6 1770 aaPredicted RBP17■□□□□ 0.31
AP000959.1-201ENST00000441759 CC2D1BQ5T0F9 858 aaKnown RBP16.99■□□□□ 0.31
AP000959.1-201ENST00000441759 RC3H1Q5TC82 1133 aaKnown RBP16.99■□□□□ 0.31
AP000959.1-201ENST00000441759 RTCBQ9Y3I0 505 aaKnown RBP16.99■□□□□ 0.31
AP000959.1-201ENST00000441759 GOLGB1Q14789 3259 aaKnown RBP16.99■□□□□ 0.31
AP000959.1-201ENST00000441759 UBR2Q8IWV8 1755 aa16.99■□□□□ 0.31
AP000959.1-201ENST00000441759 GRIN3BO60391 1043 aa16.98■□□□□ 0.31
AP000959.1-201ENST00000441759 AKAP4Q5JQC9 854 aa16.98■□□□□ 0.31
AP000959.1-201ENST00000441759 NFATC2IPQ8NCF5 419 aa16.98■□□□□ 0.31
AP000959.1-201ENST00000441759 BRCA1P38398 1863 aaKnown RBP16.97■□□□□ 0.31
AP000959.1-201ENST00000441759 HMOX1P09601 288 aa16.97■□□□□ 0.31
AP000959.1-201ENST00000441759 PTCD1O75127 700 aaKnown RBP16.96■□□□□ 0.31
AP000959.1-201ENST00000441759 TRAPPC3LQ5T215 181 aa16.96■□□□□ 0.31
AP000959.1-201ENST00000441759 SSUH2Q9Y2M2 353 aa16.96■□□□□ 0.31
AP000959.1-201ENST00000441759 SIPA1L3O60292 1781 aaPredicted RBP16.96■□□□□ 0.31
AP000959.1-201ENST00000441759 KCPQ6ZWJ8 1503 aa16.96■□□□□ 0.3
AP000959.1-201ENST00000441759 DIAPH1O60610 1272 aaKnown RBP16.95■□□□□ 0.3
AP000959.1-201ENST00000441759 RPS6KA4O75676 772 aa16.95■□□□□ 0.3
AP000959.1-201ENST00000441759 MMP10P09238 476 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms