RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 NECTIN2Q92692 538 aa8.99□□□□□ -0.97
HDAC9-214ENST00000441542 MEIS3Q99687 375 aa8.99□□□□□ -0.97
HDAC9-214ENST00000441542 DDX41Q9UJV9 622 aaKnown RBP8.99□□□□□ -0.97
HDAC9-214ENST00000441542 ARAP3Q8WWN8 1544 aa8.99□□□□□ -0.97
HDAC9-214ENST00000441542 NPC1L1Q9UHC9 1359 aa8.99□□□□□ -0.97
HDAC9-214ENST00000441542 CCDC141Q6ZP82 1450 aa8.99□□□□□ -0.97
HDAC9-214ENST00000441542 GOLGA6L4A6NEF3 574 aa8.99□□□□□ -0.97
HDAC9-214ENST00000441542 KIF3BO15066 747 aa8.99□□□□□ -0.97
HDAC9-214ENST00000441542 KMT5BQ4FZB7 885 aa8.99□□□□□ -0.97
HDAC9-214ENST00000441542 ABCA8O94911 1581 aa8.99□□□□□ -0.97
HDAC9-214ENST00000441542 USP27XA6NNY8 438 aa8.99□□□□□ -0.97
HDAC9-214ENST00000441542 SETQ01105 290 aaPredicted RBP8.99□□□□□ -0.97
HDAC9-214ENST00000441542 GABPB1Q06547 395 aaPredicted RBP8.99□□□□□ -0.97
HDAC9-214ENST00000441542 CCDC83Q8IWF9 413 aa8.99□□□□□ -0.97
HDAC9-214ENST00000441542 TFIP11Q9UBB9 837 aaKnown RBP8.99□□□□□ -0.97
HDAC9-214ENST00000441542 SMC3Q9UQE7 1217 aa8.99□□□□□ -0.97
HDAC9-214ENST00000441542 CD109Q6YHK3 1445 aa8.98□□□□□ -0.97
HDAC9-214ENST00000441542 F6X3S4 739 aa8.98□□□□□ -0.97
HDAC9-214ENST00000441542 CEP135Q66GS9 1140 aa8.98□□□□□ -0.97
HDAC9-214ENST00000441542 AFAP1Q8N556 730 aa8.98□□□□□ -0.97
HDAC9-214ENST00000441542 ADGBQ8N7X0 1667 aa8.98□□□□□ -0.97
HDAC9-214ENST00000441542 HNRNPH2P55795 449 aaKnown RBP8.98□□□□□ -0.97
HDAC9-214ENST00000441542 MLECQ14165 292 aa8.98□□□□□ -0.97
HDAC9-214ENST00000441542 FBXO38Q6PIJ6 1188 aa8.98□□□□□ -0.97
HDAC9-214ENST00000441542 DCTPP1Q9H773 170 aa8.98□□□□□ -0.97
HDAC9-214ENST00000441542 IL1RAPL2Q9NP60 686 aa8.98□□□□□ -0.97
HDAC9-214ENST00000441542 MBIPQ9NS73 344 aa8.98□□□□□ -0.97
HDAC9-214ENST00000441542 RAPGEF3O95398 923 aa8.97□□□□□ -0.97
HDAC9-214ENST00000441542 CCDC192P0DO97 292 aa8.97□□□□□ -0.97
HDAC9-214ENST00000441542 IRX3P78415 501 aaPredicted RBP8.97□□□□□ -0.97
HDAC9-214ENST00000441542 DNAJC2Q99543 621 aaKnown RBP8.97□□□□□ -0.97
HDAC9-214ENST00000441542 NOL10Q9BSC4 688 aaKnown RBP8.97□□□□□ -0.97
HDAC9-214ENST00000441542 PRDM16Q9HAZ2 1276 aa8.97□□□□□ -0.97
HDAC9-214ENST00000441542 ERVK-7P63135 1459 aa8.97□□□□□ -0.97
HDAC9-214ENST00000441542 SMTNL1A8MU46 457 aa8.97□□□□□ -0.97
HDAC9-214ENST00000441542 CEBPZQ03701 1054 aaKnown RBP8.97□□□□□ -0.97
HDAC9-214ENST00000441542 SKIDA1Q1XH10 827 aa8.97□□□□□ -0.97
HDAC9-214ENST00000441542 ANO6Q4KMQ2 910 aa8.97□□□□□ -0.97
HDAC9-214ENST00000441542 C10orf67Q8IYJ2 551 aa8.97□□□□□ -0.97
HDAC9-214ENST00000441542 PLEKHF1Q96S99 279 aa8.97□□□□□ -0.97
HDAC9-214ENST00000441542 TOMM22Q9NS69 142 aa8.97□□□□□ -0.97
HDAC9-214ENST00000441542 RAPGEF6Q8TEU7 1601 aa8.97□□□□□ -0.97
HDAC9-214ENST00000441542 ABCC11Q96J66 1382 aa8.97□□□□□ -0.97
HDAC9-214ENST00000441542 SOX12O15370 315 aa8.97□□□□□ -0.97
HDAC9-214ENST00000441542 SYT1P21579 422 aa8.97□□□□□ -0.97
HDAC9-214ENST00000441542 ALDH1L2Q3SY69 923 aa8.97□□□□□ -0.97
HDAC9-214ENST00000441542 NECAB1Q8N987 351 aa8.97□□□□□ -0.97
HDAC9-214ENST00000441542 MIS18AQ9NYP9 233 aa8.97□□□□□ -0.97
HDAC9-214ENST00000441542 CALCOCO1Q9P1Z2 691 aa8.97□□□□□ -0.97
HDAC9-214ENST00000441542 CLIP2Q9UDT6 1046 aa8.97□□□□□ -0.97
HDAC9-214ENST00000441542 FER1L4A9Z1Z3 1794 aa8.97□□□□□ -0.97
HDAC9-214ENST00000441542 MINK1Q8N4C8 1332 aaPredicted RBP8.96□□□□□ -0.97
HDAC9-214ENST00000441542 CTIFO43310 598 aaKnown RBP8.96□□□□□ -0.97
HDAC9-214ENST00000441542 UBE2HP62256 183 aa8.96□□□□□ -0.97
HDAC9-214ENST00000441542 CACTINQ8WUQ7 758 aaKnown RBP8.96□□□□□ -0.97
HDAC9-214ENST00000441542 API5Q9BZZ5 524 aaKnown RBP8.96□□□□□ -0.97
HDAC9-214ENST00000441542 NOS1P29475 1434 aa8.96□□□□□ -0.98
HDAC9-214ENST00000441542 STX6O43752 255 aa8.96□□□□□ -0.98
HDAC9-214ENST00000441542 ZSCAN22P10073 491 aaPredicted RBP8.96□□□□□ -0.98
HDAC9-214ENST00000441542 LIG1P18858 919 aa8.96□□□□□ -0.98
HDAC9-214ENST00000441542 DNAJC25Q9H1X3 360 aa8.96□□□□□ -0.98
HDAC9-214ENST00000441542 CFAP74Q9C0B2 1584 aa8.96□□□□□ -0.98
HDAC9-214ENST00000441542 PDE1AP54750 535 aa8.95□□□□□ -0.98
HDAC9-214ENST00000441542 NUTM1Q86Y26 1132 aa8.95□□□□□ -0.98
HDAC9-214ENST00000441542 UNC5CLQ8IV45 518 aa8.95□□□□□ -0.98
HDAC9-214ENST00000441542 ZNF428Q96B54 188 aa8.95□□□□□ -0.98
HDAC9-214ENST00000441542 TCEANC2Q96MN5 208 aa8.95□□□□□ -0.98
HDAC9-214ENST00000441542 ESYT1Q9BSJ8 1104 aa8.95□□□□□ -0.98
HDAC9-214ENST00000441542 PLXNC1O60486 1568 aa8.95□□□□□ -0.98
HDAC9-214ENST00000441542 PPFIA3O75145 1194 aa8.95□□□□□ -0.98
HDAC9-214ENST00000441542 TYRO3Q06418 890 aa8.95□□□□□ -0.98
HDAC9-214ENST00000441542 PTPN14Q15678 1187 aa8.95□□□□□ -0.98
HDAC9-214ENST00000441542 ERCC6LQ2NKX8 1250 aa8.95□□□□□ -0.98
HDAC9-214ENST00000441542 CCDC144BQ3MJ40 725 aa8.95□□□□□ -0.98
HDAC9-214ENST00000441542 ZSCAN25Q6NSZ9 544 aa8.95□□□□□ -0.98
HDAC9-214ENST00000441542 CEP85Q6P2H3 762 aa8.95□□□□□ -0.98
HDAC9-214ENST00000441542 CCDC144CPQ8IYA2 1237 aa8.95□□□□□ -0.98
HDAC9-214ENST00000441542 ZNF397Q8NF99 534 aaPredicted RBP8.95□□□□□ -0.98
HDAC9-214ENST00000441542 RSPH14Q9UHP6 348 aa8.95□□□□□ -0.98
HDAC9-214ENST00000441542 GYS2P54840 703 aa8.95□□□□□ -0.98
HDAC9-214ENST00000441542 FAM177A1Q8N128 213 aaPredicted RBP8.95□□□□□ -0.98
HDAC9-214ENST00000441542 BICD2Q8TD16 824 aa8.95□□□□□ -0.98
HDAC9-214ENST00000441542 ERCC4Q92889 916 aaPredicted RBP8.95□□□□□ -0.98
HDAC9-214ENST00000441542 NUP62CLQ9H1M0 184 aa8.95□□□□□ -0.98
HDAC9-214ENST00000441542 IL25Q9H293 177 aa8.95□□□□□ -0.98
HDAC9-214ENST00000441542 TNMDQ9H2S6 317 aa8.95□□□□□ -0.98
HDAC9-214ENST00000441542 USP16Q9Y5T5 823 aa8.95□□□□□ -0.98
HDAC9-214ENST00000441542 ANKRD36BQ8N2N9 1353 aa8.94□□□□□ -0.98
HDAC9-214ENST00000441542 CBX8Q9HC52 389 aa8.94□□□□□ -0.98
HDAC9-214ENST00000441542 ZCCHC17Q9NP64 241 aaKnown RBP8.94□□□□□ -0.98
HDAC9-214ENST00000441542 DACT1Q9NYF0 836 aa8.94□□□□□ -0.98
HDAC9-214ENST00000441542 SPG7Q9UQ90 795 aa8.94□□□□□ -0.98
HDAC9-214ENST00000441542 ATP10BO94823 1461 aa8.94□□□□□ -0.98
HDAC9-214ENST00000441542 PTPRTO14522 1441 aa8.94□□□□□ -0.98
HDAC9-214ENST00000441542 TRIM66O15016 1216 aa8.94□□□□□ -0.98
HDAC9-214ENST00000441542 LARGE1O95461 756 aa8.94□□□□□ -0.98
HDAC9-214ENST00000441542 MAP3K11Q16584 847 aa8.94□□□□□ -0.98
HDAC9-214ENST00000441542 LRRN4CLQ8ND94 238 aa8.94□□□□□ -0.98
HDAC9-214ENST00000441542 MORC2Q9Y6X9 1032 aaPredicted RBP8.94□□□□□ -0.98
HDAC9-214ENST00000441542 ZNF518AQ6AHZ1 1483 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms