RNA–Protein interactions for RNA: ENST00000441298.5

ZNF3-209, Transcript of zinc finger protein 3, humanhuman

TSL 4

Gene ZNF3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-209ENST00000441298 AKAP4Q5JQC9 854 aa17.19■□□□□ 0.34
ZNF3-209ENST00000441298 SMIM5Q71RC9 77 aa17.19■□□□□ 0.34
ZNF3-209ENST00000441298 COL23A1Q86Y22 540 aaPredicted RBP17.19■□□□□ 0.34
ZNF3-209ENST00000441298 LINC00116Q8NCU8 138 aa17.19■□□□□ 0.34
ZNF3-209ENST00000441298 FHDC1Q9C0D6 1143 aaPredicted RBP17.19■□□□□ 0.34
ZNF3-209ENST00000441298 SCN11AQ9UI33 1791 aa17.19■□□□□ 0.34
ZNF3-209ENST00000441298 PPP2R1AP30153 589 aa17.18■□□□□ 0.34
ZNF3-209ENST00000441298 ITPK1Q13572 414 aa17.18■□□□□ 0.34
ZNF3-209ENST00000441298 SLC16A10Q8TF71 515 aa17.18■□□□□ 0.34
ZNF3-209ENST00000441298 VIRMAQ69YN4 1812 aaKnown RBP17.18■□□□□ 0.34
ZNF3-209ENST00000441298 GNPATO15228 680 aa17.17■□□□□ 0.34
ZNF3-209ENST00000441298 MTHFSDQ2M296 383 aaKnown RBP17.17■□□□□ 0.34
ZNF3-209ENST00000441298 UBR3Q6ZT12 1888 aa17.17■□□□□ 0.34
ZNF3-209ENST00000441298 SGIP1Q9BQI5 828 aa17.17■□□□□ 0.34
ZNF3-209ENST00000441298 DCAF8L1A6NGE4 600 aa17.16■□□□□ 0.34
ZNF3-209ENST00000441298 PTCD1O75127 700 aaKnown RBP17.16■□□□□ 0.34
ZNF3-209ENST00000441298 HMGB2P26583 209 aaKnown RBP17.16■□□□□ 0.34
ZNF3-209ENST00000441298 NFATC2IPQ8NCF5 419 aa17.16■□□□□ 0.34
ZNF3-209ENST00000441298 AMIGO3Q86WK7 504 aa17.15■□□□□ 0.34
ZNF3-209ENST00000441298 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.14■□□□□ 0.33
ZNF3-209ENST00000441298 U2AF1L5P0DN76 240 aaPredicted RBP17.14■□□□□ 0.33
ZNF3-209ENST00000441298 U2AF1Q01081 240 aaKnown RBP eCLIP17.14■□□□□ 0.33
ZNF3-209ENST00000441298 FLAD1Q8NFF5 587 aa17.14■□□□□ 0.33
ZNF3-209ENST00000441298 LGR6Q9HBX8 967 aa17.14■□□□□ 0.33
ZNF3-209ENST00000441298 NUDCQ9Y266 331 aa17.14■□□□□ 0.33
ZNF3-209ENST00000441298 RNMTO43148 476 aaKnown RBP17.13■□□□□ 0.33
ZNF3-209ENST00000441298 PRKAR2BP31323 418 aa17.13■□□□□ 0.33
ZNF3-209ENST00000441298 SYT17Q9BSW7 474 aa17.13■□□□□ 0.33
ZNF3-209ENST00000441298 MRC1P22897 1456 aa17.12■□□□□ 0.33
ZNF3-209ENST00000441298 SLC4A9Q96Q91 983 aa17.12■□□□□ 0.33
ZNF3-209ENST00000441298 SLC52A2Q9HAB3 445 aa17.12■□□□□ 0.33
ZNF3-209ENST00000441298 COL5A3P25940 1745 aaPredicted RBP17.12■□□□□ 0.33
ZNF3-209ENST00000441298 MAP3K5Q99683 1374 aa17.12■□□□□ 0.33
ZNF3-209ENST00000441298 COL24A1Q17RW2 1714 aa17.11■□□□□ 0.33
ZNF3-209ENST00000441298 SSFA2P28290 1259 aa17.11■□□□□ 0.33
ZNF3-209ENST00000441298 DDX10Q13206 875 aaKnown RBP17.11■□□□□ 0.33
ZNF3-209ENST00000441298 GAS2L2Q8NHY3 880 aa17.11■□□□□ 0.33
ZNF3-209ENST00000441298 SLC39A6Q13433 755 aa17.1■□□□□ 0.33
ZNF3-209ENST00000441298 RSPH6AQ9H0K4 717 aa17.1■□□□□ 0.33
ZNF3-209ENST00000441298 TJP1Q07157 1748 aa17.1■□□□□ 0.33
ZNF3-209ENST00000441298 PELP1Q8IZL8 1130 aaKnown RBP17.09■□□□□ 0.33
ZNF3-209ENST00000441298 RTCBQ9Y3I0 505 aaKnown RBP17.09■□□□□ 0.33
ZNF3-209ENST00000441298 ZNF831Q5JPB2 1677 aa17.09■□□□□ 0.33
ZNF3-209ENST00000441298 ADAMTS7Q9UKP4 1686 aa17.08■□□□□ 0.32
ZNF3-209ENST00000441298 CNTNAP4Q9C0A0 1308 aa17.08■□□□□ 0.32
ZNF3-209ENST00000441298 GNAT3A8MTJ3 354 aa17.08■□□□□ 0.32
ZNF3-209ENST00000441298 PHACTR3Q96KR7 559 aa17.08■□□□□ 0.32
ZNF3-209ENST00000441298 TEFQ10587 303 aa17.07■□□□□ 0.32
ZNF3-209ENST00000441298 MYH14Q7Z406 1995 aaKnown RBP17.06■□□□□ 0.32
ZNF3-209ENST00000441298 CRKLP46109 303 aaKnown RBP17.06■□□□□ 0.32
ZNF3-209ENST00000441298 NLGN2Q8NFZ4 835 aa17.06■□□□□ 0.32
ZNF3-209ENST00000441298 TRAPPC3LQ5T215 181 aa17.05■□□□□ 0.32
ZNF3-209ENST00000441298 DNAJC10Q8IXB1 793 aa17.05■□□□□ 0.32
ZNF3-209ENST00000441298 TTC5Q8N0Z6 440 aa17.05■□□□□ 0.32
ZNF3-209ENST00000441298 KCPQ6ZWJ8 1503 aa17.05■□□□□ 0.32
ZNF3-209ENST00000441298 C4AP0C0L4 1744 aa17.04■□□□□ 0.32
ZNF3-209ENST00000441298 GPR162Q16538 588 aa17.04■□□□□ 0.32
ZNF3-209ENST00000441298 IL17REQ8NFR9 667 aa17.04■□□□□ 0.32
ZNF3-209ENST00000441298 NEFMP07197 916 aa17.03■□□□□ 0.32
ZNF3-209ENST00000441298 YY1P25490 414 aa17.03■□□□□ 0.32
ZNF3-209ENST00000441298 RFC4P35249 363 aa17.03■□□□□ 0.32
ZNF3-209ENST00000441298 RC3H1Q5TC82 1133 aaKnown RBP17.03■□□□□ 0.32
ZNF3-209ENST00000441298 RTF1Q92541 710 aaKnown RBP17.03■□□□□ 0.32
ZNF3-209ENST00000441298 ARHGEF1Q92888 912 aaKnown RBP17.03■□□□□ 0.32
ZNF3-209ENST00000441298 CICQ96RK0 1608 aaPredicted RBP17.03■□□□□ 0.32
ZNF3-209ENST00000441298 RPS6KA4O75676 772 aa17.02■□□□□ 0.32
ZNF3-209ENST00000441298 FCHSD2O94868 740 aa17.02■□□□□ 0.32
ZNF3-209ENST00000441298 SIPA1L3O60292 1781 aaPredicted RBP17.02■□□□□ 0.31
ZNF3-209ENST00000441298 UBR2Q8IWV8 1755 aa17.02■□□□□ 0.31
ZNF3-209ENST00000441298 MMP10P09238 476 aa17.01■□□□□ 0.31
ZNF3-209ENST00000441298 ADRA2BP18089 450 aa17.01■□□□□ 0.31
ZNF3-209ENST00000441298 MCM10Q7L590 875 aa17.01■□□□□ 0.31
ZNF3-209ENST00000441298 WWC3Q9ULE0 1092 aa17.01■□□□□ 0.31
ZNF3-209ENST00000441298 RALBP1Q15311 655 aa17■□□□□ 0.31
ZNF3-209ENST00000441298 CCDC87Q9NVE4 849 aa17■□□□□ 0.31
ZNF3-209ENST00000441298 SRP68Q9UHB9 627 aaKnown RBP17■□□□□ 0.31
ZNF3-209ENST00000441298 DCTN1Q14203 1278 aa16.99■□□□□ 0.31
ZNF3-209ENST00000441298 BTBD11A6QL63 1104 aa16.98■□□□□ 0.31
ZNF3-209ENST00000441298 CYP19A1P11511 503 aaPredicted RBP16.98■□□□□ 0.31
ZNF3-209ENST00000441298 ZEB1P37275 1124 aaPredicted RBP16.98■□□□□ 0.31
ZNF3-209ENST00000441298 INTS5Q6P9B9 1019 aaKnown RBP16.98■□□□□ 0.31
ZNF3-209ENST00000441298 ZNF790Q6PG37 636 aa16.98■□□□□ 0.31
ZNF3-209ENST00000441298 ZNF496Q96IT1 587 aaPredicted RBP16.98■□□□□ 0.31
ZNF3-209ENST00000441298 ZBTB1Q9Y2K1 713 aa16.98■□□□□ 0.31
ZNF3-209ENST00000441298 ZNF330Q9Y3S2 320 aaPredicted RBP16.98■□□□□ 0.31
ZNF3-209ENST00000441298 CEMIPQ8WUJ3 1361 aa16.98■□□□□ 0.31
ZNF3-209ENST00000441298 MYBBP1AQ9BQG0 1328 aaKnown RBP16.97■□□□□ 0.31
ZNF3-209ENST00000441298 MAPK8IP3Q9UPT6 1336 aa16.97■□□□□ 0.31
ZNF3-209ENST00000441298 GYS1P13807 737 aa16.97■□□□□ 0.31
ZNF3-209ENST00000441298 CANXP27824 592 aaKnown RBP16.97■□□□□ 0.31
ZNF3-209ENST00000441298 DLG5Q8TDM6 1919 aa16.96■□□□□ 0.31
ZNF3-209ENST00000441298 NLGN1Q8N2Q7 840 aa16.96■□□□□ 0.31
ZNF3-209ENST00000441298 CD2APQ9Y5K6 639 aa16.96■□□□□ 0.31
ZNF3-209ENST00000441298 SOS1Q07889 1333 aaPredicted RBP16.96■□□□□ 0.3
ZNF3-209ENST00000441298 USP42Q9H9J4 1324 aaKnown RBP16.96■□□□□ 0.3
ZNF3-209ENST00000441298 COL15A1P39059 1388 aa16.95■□□□□ 0.3
ZNF3-209ENST00000441298 HEG1Q9ULI3 1381 aa16.95■□□□□ 0.3
ZNF3-209ENST00000441298 KCNQ3O43525 872 aa16.95■□□□□ 0.3
ZNF3-209ENST00000441298 STARD3NLO95772 234 aa16.95■□□□□ 0.3
ZNF3-209ENST00000441298 VSIG10Q8N0Z9 540 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms