RNA–Protein interactions for RNA: ENST00000441238.1

TGFA-IT1-201, TGFA intronic transcript 1, humanhuman

TSL 5 BASIC

Gene TGFA-IT1, Length 436 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-IT1-201ENST00000441238 HMOX1P09601 288 aa13.76□□□□□ -0.21
TGFA-IT1-201ENST00000441238 AKAP4Q5JQC9 854 aa13.76□□□□□ -0.21
TGFA-IT1-201ENST00000441238 COL23A1Q86Y22 540 aaPredicted RBP13.76□□□□□ -0.21
TGFA-IT1-201ENST00000441238 MRC1P22897 1456 aa13.75□□□□□ -0.21
TGFA-IT1-201ENST00000441238 PPP2R1AP30153 589 aa13.75□□□□□ -0.21
TGFA-IT1-201ENST00000441238 CABP4P57796 275 aa13.75□□□□□ -0.21
TGFA-IT1-201ENST00000441238 ITPK1Q13572 414 aa13.75□□□□□ -0.21
TGFA-IT1-201ENST00000441238 SLC4A9Q96Q91 983 aa13.75□□□□□ -0.21
TGFA-IT1-201ENST00000441238 NFATC2IPQ8NCF5 419 aa13.74□□□□□ -0.21
TGFA-IT1-201ENST00000441238 LINC00116Q8NCU8 138 aa13.74□□□□□ -0.21
TGFA-IT1-201ENST00000441238 ARXQ96QS3 562 aa13.74□□□□□ -0.21
TGFA-IT1-201ENST00000441238 SYT17Q9BSW7 474 aa13.74□□□□□ -0.21
TGFA-IT1-201ENST00000441238 ATP6V1AP38606 617 aa13.73□□□□□ -0.21
TGFA-IT1-201ENST00000441238 MTHFSDQ2M296 383 aaKnown RBP13.73□□□□□ -0.21
TGFA-IT1-201ENST00000441238 AMIGO3Q86WK7 504 aa13.73□□□□□ -0.21
TGFA-IT1-201ENST00000441238 SIPA1L3O60292 1781 aaPredicted RBP13.73□□□□□ -0.21
TGFA-IT1-201ENST00000441238 RNMTO43148 476 aaKnown RBP13.72□□□□□ -0.21
TGFA-IT1-201ENST00000441238 SSFA2P28290 1259 aa13.72□□□□□ -0.21
TGFA-IT1-201ENST00000441238 RC3H1Q5TC82 1133 aaKnown RBP13.72□□□□□ -0.21
TGFA-IT1-201ENST00000441238 CFAP53Q96M91 514 aa13.72□□□□□ -0.21
TGFA-IT1-201ENST00000441238 FHDC1Q9C0D6 1143 aaPredicted RBP13.72□□□□□ -0.21
TGFA-IT1-201ENST00000441238 LGR6Q9HBX8 967 aa13.72□□□□□ -0.21
TGFA-IT1-201ENST00000441238 TJP1Q07157 1748 aa13.72□□□□□ -0.21
TGFA-IT1-201ENST00000441238 UBR2Q8IWV8 1755 aa13.71□□□□□ -0.21
TGFA-IT1-201ENST00000441238 CNGB1Q14028 1251 aaPredicted RBP13.71□□□□□ -0.21
TGFA-IT1-201ENST00000441238 AK7Q96M32 723 aa13.71□□□□□ -0.21
TGFA-IT1-201ENST00000441238 SLC52A2Q9HAB3 445 aa13.71□□□□□ -0.21
TGFA-IT1-201ENST00000441238 CHD4Q14839 1912 aa13.7□□□□□ -0.22
TGFA-IT1-201ENST00000441238 UTRNP46939 3433 aa13.7□□□□□ -0.22
TGFA-IT1-201ENST00000441238 U2SURPO15042 1029 aaKnown RBP13.7□□□□□ -0.22
TGFA-IT1-201ENST00000441238 POLD1P28340 1107 aa13.7□□□□□ -0.22
TGFA-IT1-201ENST00000441238 RSPH6AQ9H0K4 717 aa13.7□□□□□ -0.22
TGFA-IT1-201ENST00000441238 CNTNAP4Q9C0A0 1308 aa13.69□□□□□ -0.22
TGFA-IT1-201ENST00000441238 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.69□□□□□ -0.22
TGFA-IT1-201ENST00000441238 NUDCQ9Y266 331 aa13.69□□□□□ -0.22
TGFA-IT1-201ENST00000441238 GOLGB1Q14789 3259 aaKnown RBP13.68□□□□□ -0.22
TGFA-IT1-201ENST00000441238 C4AP0C0L4 1744 aa13.68□□□□□ -0.22
TGFA-IT1-201ENST00000441238 FCHSD2O94868 740 aa13.68□□□□□ -0.22
TGFA-IT1-201ENST00000441238 GAS2L2Q8NHY3 880 aa13.68□□□□□ -0.22
TGFA-IT1-201ENST00000441238 RBM42Q9BTD8 480 aaKnown RBP13.68□□□□□ -0.22
TGFA-IT1-201ENST00000441238 GNAT3A8MTJ3 354 aa13.67□□□□□ -0.22
TGFA-IT1-201ENST00000441238 GNPATO15228 680 aa13.67□□□□□ -0.22
TGFA-IT1-201ENST00000441238 MSH5O43196 834 aa13.67□□□□□ -0.22
TGFA-IT1-201ENST00000441238 ADRA2BP18089 450 aa13.67□□□□□ -0.22
TGFA-IT1-201ENST00000441238 PHACTR3Q96KR7 559 aa13.67□□□□□ -0.22
TGFA-IT1-201ENST00000441238 KCPQ6ZWJ8 1503 aa13.67□□□□□ -0.22
TGFA-IT1-201ENST00000441238 CEMIPQ8WUJ3 1361 aa13.67□□□□□ -0.22
TGFA-IT1-201ENST00000441238 DLG5Q8TDM6 1919 aa13.66□□□□□ -0.22
TGFA-IT1-201ENST00000441238 PTCD1O75127 700 aaKnown RBP13.66□□□□□ -0.22
TGFA-IT1-201ENST00000441238 RPS6KA4O75676 772 aa13.66□□□□□ -0.22
TGFA-IT1-201ENST00000441238 PRKAR2BP31323 418 aa13.66□□□□□ -0.22
TGFA-IT1-201ENST00000441238 SMIM5Q71RC9 77 aa13.66□□□□□ -0.22
TGFA-IT1-201ENST00000441238 IL17REQ8NFR9 667 aa13.66□□□□□ -0.22
TGFA-IT1-201ENST00000441238 KIF13BQ9NQT8 1826 aa13.65□□□□□ -0.22
TGFA-IT1-201ENST00000441238 DCAF8L1A6NGE4 600 aa13.65□□□□□ -0.22
TGFA-IT1-201ENST00000441238 RTCBQ9Y3I0 505 aaKnown RBP13.65□□□□□ -0.22
TGFA-IT1-201ENST00000441238 PHF14O94880 888 aa13.64□□□□□ -0.23
TGFA-IT1-201ENST00000441238 U2AF1L5P0DN76 240 aaPredicted RBP13.64□□□□□ -0.23
TGFA-IT1-201ENST00000441238 CRKLP46109 303 aaKnown RBP13.64□□□□□ -0.23
TGFA-IT1-201ENST00000441238 U2AF1Q01081 240 aaKnown RBP eCLIP13.64□□□□□ -0.23
TGFA-IT1-201ENST00000441238 RALBP1Q15311 655 aa13.64□□□□□ -0.23
TGFA-IT1-201ENST00000441238 TRAPPC3LQ5T215 181 aa13.64□□□□□ -0.23
TGFA-IT1-201ENST00000441238 MSL1Q68DK7 614 aa13.64□□□□□ -0.23
TGFA-IT1-201ENST00000441238 VSIG10Q8N0Z9 540 aa13.64□□□□□ -0.23
TGFA-IT1-201ENST00000441238 SLC39A6Q13433 755 aa13.63□□□□□ -0.23
TGFA-IT1-201ENST00000441238 ARHGEF1Q92888 912 aaKnown RBP13.63□□□□□ -0.23
TGFA-IT1-201ENST00000441238 CD2APQ9Y5K6 639 aa13.63□□□□□ -0.23
TGFA-IT1-201ENST00000441238 HTATSF1O43719 755 aaKnown RBP13.62□□□□□ -0.23
TGFA-IT1-201ENST00000441238 DDX10Q13206 875 aaKnown RBP13.62□□□□□ -0.23
TGFA-IT1-201ENST00000441238 INTS5Q6P9B9 1019 aaKnown RBP13.62□□□□□ -0.23
TGFA-IT1-201ENST00000441238 CYP19A1P11511 503 aaPredicted RBP13.61□□□□□ -0.23
TGFA-IT1-201ENST00000441238 TEFQ10587 303 aa13.61□□□□□ -0.23
TGFA-IT1-201ENST00000441238 DNAJC10Q8IXB1 793 aa13.61□□□□□ -0.23
TGFA-IT1-201ENST00000441238 NLGN1Q8N2Q7 840 aa13.61□□□□□ -0.23
TGFA-IT1-201ENST00000441238 NLGN2Q8NFZ4 835 aa13.61□□□□□ -0.23
TGFA-IT1-201ENST00000441238 GYS1P13807 737 aa13.6□□□□□ -0.23
TGFA-IT1-201ENST00000441238 ZNF790Q6PG37 636 aa13.6□□□□□ -0.23
TGFA-IT1-201ENST00000441238 CCDC87Q9NVE4 849 aa13.6□□□□□ -0.23
TGFA-IT1-201ENST00000441238 KIAA1551Q9HCM1 1747 aa13.59□□□□□ -0.23
TGFA-IT1-201ENST00000441238 RFC4P35249 363 aa13.59□□□□□ -0.23
TGFA-IT1-201ENST00000441238 PLEKHF1Q96S99 279 aa13.59□□□□□ -0.23
TGFA-IT1-201ENST00000441238 MMP10P09238 476 aa13.58□□□□□ -0.24
TGFA-IT1-201ENST00000441238 ZEB1P37275 1124 aaPredicted RBP13.58□□□□□ -0.24
TGFA-IT1-201ENST00000441238 TTC5Q8N0Z6 440 aa13.58□□□□□ -0.24
TGFA-IT1-201ENST00000441238 ZNF496Q96IT1 587 aaPredicted RBP13.58□□□□□ -0.24
TGFA-IT1-201ENST00000441238 TEX13AQ9BXU3 409 aaPredicted RBP13.58□□□□□ -0.24
TGFA-IT1-201ENST00000441238 SOS1Q07889 1333 aaPredicted RBP13.58□□□□□ -0.24
TGFA-IT1-201ENST00000441238 USP42Q9H9J4 1324 aaKnown RBP13.58□□□□□ -0.24
TGFA-IT1-201ENST00000441238 HEG1Q9ULI3 1381 aa13.58□□□□□ -0.24
TGFA-IT1-201ENST00000441238 BRCA1P38398 1863 aaKnown RBP13.57□□□□□ -0.24
TGFA-IT1-201ENST00000441238 KLHL34Q8N239 644 aa13.57□□□□□ -0.24
TGFA-IT1-201ENST00000441238 AFDNP55196 1824 aaKnown RBP13.56□□□□□ -0.24
TGFA-IT1-201ENST00000441238 STARD3NLO95772 234 aa13.56□□□□□ -0.24
TGFA-IT1-201ENST00000441238 YY1P25490 414 aa13.56□□□□□ -0.24
TGFA-IT1-201ENST00000441238 PNNQ9H307 717 aaKnown RBP13.56□□□□□ -0.24
TGFA-IT1-201ENST00000441238 MYBBP1AQ9BQG0 1328 aaKnown RBP13.56□□□□□ -0.24
TGFA-IT1-201ENST00000441238 KDM3BQ7LBC6 1761 aa13.55□□□□□ -0.24
TGFA-IT1-201ENST00000441238 BTBD11A6QL63 1104 aa13.55□□□□□ -0.24
TGFA-IT1-201ENST00000441238 GPR162Q16538 588 aa13.55□□□□□ -0.24
TGFA-IT1-201ENST00000441238 RTF1Q92541 710 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms