RNA–Protein interactions for RNA: ENST00000440860.1

LINC00354-202, long intergenic non-protein coding RNA 354, humanhuman

TSL 2 BASIC

Gene LINC00354, Length 376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00354-202ENST00000440860 NOD1Q9Y239 953 aa10.41□□□□□ -0.74
LINC00354-202ENST00000440860 INHAP05111 366 aa10.4□□□□□ -0.74
LINC00354-202ENST00000440860 NCOA4Q13772 614 aa10.4□□□□□ -0.74
LINC00354-202ENST00000440860 TRIM22Q8IYM9 498 aa10.4□□□□□ -0.74
LINC00354-202ENST00000440860 SCNN1DP51172 638 aa10.39□□□□□ -0.75
LINC00354-202ENST00000440860 PROSER2Q86WR7 435 aaPredicted RBP10.39□□□□□ -0.75
LINC00354-202ENST00000440860 PCDHGA11Q9Y5H2 935 aa10.39□□□□□ -0.75
LINC00354-202ENST00000440860 H7C1W4 665 aa10.38□□□□□ -0.75
LINC00354-202ENST00000440860 GPR25O00155 361 aa10.38□□□□□ -0.75
LINC00354-202ENST00000440860 LZTS3O60299 673 aaPredicted RBP10.38□□□□□ -0.75
LINC00354-202ENST00000440860 F11P03951 625 aa10.38□□□□□ -0.75
LINC00354-202ENST00000440860 C4orf17Q53FE4 359 aa10.38□□□□□ -0.75
LINC00354-202ENST00000440860 TBC1D9Q6ZT07 1266 aa10.38□□□□□ -0.75
LINC00354-202ENST00000440860 NFATC2IPQ8NCF5 419 aa10.38□□□□□ -0.75
LINC00354-202ENST00000440860 GPAMQ9HCL2 828 aa10.38□□□□□ -0.75
LINC00354-202ENST00000440860 USP17L5A8MUK1 530 aa10.37□□□□□ -0.75
LINC00354-202ENST00000440860 GTF2IP78347 998 aa10.37□□□□□ -0.75
LINC00354-202ENST00000440860 PSME1Q06323 249 aa10.37□□□□□ -0.75
LINC00354-202ENST00000440860 FOXR1Q6PIV2 292 aa10.37□□□□□ -0.75
LINC00354-202ENST00000440860 FNBP4Q8N3X1 1017 aaPredicted RBP10.37□□□□□ -0.75
LINC00354-202ENST00000440860 ZNF837Q96EG3 531 aaPredicted RBP10.37□□□□□ -0.75
LINC00354-202ENST00000440860 TMEM229AB2RXF0 380 aa10.36□□□□□ -0.75
LINC00354-202ENST00000440860 SMTNP53814 917 aa10.36□□□□□ -0.75
LINC00354-202ENST00000440860 PPARGC1BQ86YN6 1023 aaKnown RBP10.36□□□□□ -0.75
LINC00354-202ENST00000440860 GTPBP3Q969Y2 492 aaKnown RBP10.36□□□□□ -0.75
LINC00354-202ENST00000440860 GMCL1Q96IK5 515 aa10.36□□□□□ -0.75
LINC00354-202ENST00000440860 RHBDD1Q8TEB9 315 aa10.35□□□□□ -0.75
LINC00354-202ENST00000440860 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.34□□□□□ -0.75
LINC00354-202ENST00000440860 AIDAQ96BJ3 306 aa10.34□□□□□ -0.75
LINC00354-202ENST00000440860 NUCKS1Q9H1E3 243 aaKnown RBP10.34□□□□□ -0.75
LINC00354-202ENST00000440860 A0A1B0GTH6 734 aa10.33□□□□□ -0.76
LINC00354-202ENST00000440860 GLMNQ92990 594 aa10.33□□□□□ -0.76
LINC00354-202ENST00000440860 UCN2Q96RP3 112 aa10.33□□□□□ -0.76
LINC00354-202ENST00000440860 A6NJY4 79 aa10.32□□□□□ -0.76
LINC00354-202ENST00000440860 ATP9BO43861 1147 aa10.32□□□□□ -0.76
LINC00354-202ENST00000440860 MSX1P28360 303 aa10.32□□□□□ -0.76
LINC00354-202ENST00000440860 PLA2G4AP47712 749 aa10.32□□□□□ -0.76
LINC00354-202ENST00000440860 TRERF1Q96PN7 1200 aa10.32□□□□□ -0.76
LINC00354-202ENST00000440860 RUBCNLQ9H714 662 aa10.32□□□□□ -0.76
LINC00354-202ENST00000440860 USP17L3A6NCW0 530 aa10.31□□□□□ -0.76
LINC00354-202ENST00000440860 USP17L4A6NCW7 530 aa10.31□□□□□ -0.76
LINC00354-202ENST00000440860 A6NJR5 290 aa10.31□□□□□ -0.76
LINC00354-202ENST00000440860 BACH1O14867 736 aa10.31□□□□□ -0.76
LINC00354-202ENST00000440860 CSB-PGBD3P0DP91 1061 aa10.31□□□□□ -0.76
LINC00354-202ENST00000440860 GAS6Q14393 721 aa10.31□□□□□ -0.76
LINC00354-202ENST00000440860 USP17L2Q6R6M4 530 aa10.31□□□□□ -0.76
LINC00354-202ENST00000440860 USP17L1Q7RTZ2 530 aa10.31□□□□□ -0.76
LINC00354-202ENST00000440860 PGBD3Q8N328 593 aa10.31□□□□□ -0.76
LINC00354-202ENST00000440860 CALR3Q96L12 384 aaKnown RBP10.31□□□□□ -0.76
LINC00354-202ENST00000440860 SLC4A9Q96Q91 983 aa10.31□□□□□ -0.76
LINC00354-202ENST00000440860 NIFKQ9BYG3 293 aaKnown RBP10.31□□□□□ -0.76
LINC00354-202ENST00000440860 TFIP11Q9UBB9 837 aaKnown RBP10.31□□□□□ -0.76
LINC00354-202ENST00000440860 ADAMTS2O95450 1211 aa10.3□□□□□ -0.76
LINC00354-202ENST00000440860 TRIM50Q86XT4 487 aa10.3□□□□□ -0.76
LINC00354-202ENST00000440860 WHAMMQ8TF30 809 aa10.3□□□□□ -0.76
LINC00354-202ENST00000440860 CABP1Q9NZU7 370 aa10.3□□□□□ -0.76
LINC00354-202ENST00000440860 MKRN1Q9UHC7 482 aaKnown RBP10.3□□□□□ -0.76
LINC00354-202ENST00000440860 CDK2AP1O14519 115 aa10.29□□□□□ -0.76
LINC00354-202ENST00000440860 ZBTB7BO15156 539 aaPredicted RBP10.29□□□□□ -0.76
LINC00354-202ENST00000440860 ZNF358Q9NW07 568 aa10.29□□□□□ -0.76
LINC00354-202ENST00000440860 SRSF11Q05519 484 aaKnown RBP10.28□□□□□ -0.76
LINC00354-202ENST00000440860 ZNF385CQ66K41 422 aaPredicted RBP10.28□□□□□ -0.76
LINC00354-202ENST00000440860 PLEKHM2Q8IWE5 1019 aa10.28□□□□□ -0.76
LINC00354-202ENST00000440860 SVOPQ8N4V2 548 aa10.28□□□□□ -0.76
LINC00354-202ENST00000440860 ZNF777Q9ULD5 760 aaPredicted RBP10.28□□□□□ -0.76
LINC00354-202ENST00000440860 USP3Q9Y6I4 520 aa10.28□□□□□ -0.76
LINC00354-202ENST00000440860 SLURP2P0DP57 97 aa10.27□□□□□ -0.77
LINC00354-202ENST00000440860 ATP1A2P50993 1020 aa10.27□□□□□ -0.77
LINC00354-202ENST00000440860 MTFR1Q15390 333 aa10.27□□□□□ -0.77
LINC00354-202ENST00000440860 CCDC102BQ68D86 513 aa10.27□□□□□ -0.77
LINC00354-202ENST00000440860 TPCN2Q8NHX9 752 aa10.27□□□□□ -0.77
LINC00354-202ENST00000440860 MBIPQ9NS73 344 aa10.27□□□□□ -0.77
LINC00354-202ENST00000440860 DNAAF2Q9NVR5 837 aaKnown RBP10.27□□□□□ -0.77
LINC00354-202ENST00000440860 PARP3Q9Y6F1 533 aa10.27□□□□□ -0.77
LINC00354-202ENST00000440860 THBS1P07996 1170 aa10.26□□□□□ -0.77
LINC00354-202ENST00000440860 MX2P20592 715 aa10.26□□□□□ -0.77
LINC00354-202ENST00000440860 CLDN10P78369 228 aa10.26□□□□□ -0.77
LINC00354-202ENST00000440860 EFHC2Q5JST6 749 aa10.26□□□□□ -0.77
LINC00354-202ENST00000440860 TNS4Q8IZW8 715 aa10.26□□□□□ -0.77
LINC00354-202ENST00000440860 OGFOD1Q8N543 542 aa10.26□□□□□ -0.77
LINC00354-202ENST00000440860 KIAA1024Q9UPX6 916 aa10.26□□□□□ -0.77
LINC00354-202ENST00000440860 PALM3A6NDB9 673 aaPredicted RBP10.25□□□□□ -0.77
LINC00354-202ENST00000440860 ARSJQ5FYB0 599 aaPredicted RBP10.25□□□□□ -0.77
LINC00354-202ENST00000440860 TBCELQ5QJ74 424 aa10.25□□□□□ -0.77
LINC00354-202ENST00000440860 LYPD4Q6UWN0 246 aa10.25□□□□□ -0.77
LINC00354-202ENST00000440860 IQSEC3Q9UPP2 1182 aaPredicted RBP10.25□□□□□ -0.77
LINC00354-202ENST00000440860 IGF1RP08069 1367 aa10.25□□□□□ -0.77
LINC00354-202ENST00000440860 ADAMTS8Q9UP79 889 aa10.24□□□□□ -0.77
LINC00354-202ENST00000440860 LARGE2Q8N3Y3 721 aa10.23□□□□□ -0.77
LINC00354-202ENST00000440860 ZNF594Q96JF6 807 aaPredicted RBP10.23□□□□□ -0.77
LINC00354-202ENST00000440860 CFHR5Q9BXR6 569 aa10.23□□□□□ -0.77
LINC00354-202ENST00000440860 PPP1R12CQ9BZL4 782 aa10.23□□□□□ -0.77
LINC00354-202ENST00000440860 SCHIP1Q9P0W5 487 aaPredicted RBP10.23□□□□□ -0.77
LINC00354-202ENST00000440860 PHF24Q9UPV7 400 aa10.23□□□□□ -0.77
LINC00354-202ENST00000440860 RBM19Q9Y4C8 960 aaKnown RBP10.23□□□□□ -0.77
LINC00354-202ENST00000440860 RASA1P20936 1047 aa10.22□□□□□ -0.77
LINC00354-202ENST00000440860 LBRQ14739 615 aaKnown RBP10.22□□□□□ -0.77
LINC00354-202ENST00000440860 NBPF1Q3BBV0 1214 aa10.22□□□□□ -0.77
LINC00354-202ENST00000440860 NSFL1CQ9UNZ2 370 aaKnown RBP10.22□□□□□ -0.77
LINC00354-202ENST00000440860 MAFBQ9Y5Q3 323 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms