RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 PHKG2P15735 406 aa8.21□□□□□ -1.09
PTPRR-204ENST00000440835 SIK1P57059 783 aa8.21□□□□□ -1.09
PTPRR-204ENST00000440835 TGFB2P61812 414 aa8.21□□□□□ -1.09
PTPRR-204ENST00000440835 USHBP1Q8N6Y0 703 aa8.21□□□□□ -1.09
PTPRR-204ENST00000440835 YBX3P16989 372 aaKnown RBP eCLIP8.21□□□□□ -1.1
PTPRR-204ENST00000440835 KLHL34Q8N239 644 aa8.21□□□□□ -1.1
PTPRR-204ENST00000440835 ATP10DQ9P241 1426 aa8.21□□□□□ -1.1
PTPRR-204ENST00000440835 CNTNAP4Q9C0A0 1308 aa8.21□□□□□ -1.1
PTPRR-204ENST00000440835 NLGN1Q8N2Q7 840 aa8.21□□□□□ -1.1
PTPRR-204ENST00000440835 DCAF5Q96JK2 942 aa8.21□□□□□ -1.1
PTPRR-204ENST00000440835 EYA1Q99502 592 aa8.21□□□□□ -1.1
PTPRR-204ENST00000440835 EMILIN1Q9Y6C2 1016 aa8.21□□□□□ -1.1
PTPRR-204ENST00000440835 IGSF1Q8N6C5 1336 aa8.2□□□□□ -1.1
PTPRR-204ENST00000440835 PLEKHO1Q53GL0 409 aaPredicted RBP8.2□□□□□ -1.1
PTPRR-204ENST00000440835 POLKQ9UBT6 870 aa8.2□□□□□ -1.1
PTPRR-204ENST00000440835 KIAA1551Q9HCM1 1747 aa8.2□□□□□ -1.1
PTPRR-204ENST00000440835 ARFGEF1Q9Y6D6 1849 aa8.2□□□□□ -1.1
PTPRR-204ENST00000440835 C4AP0C0L4 1744 aa8.2□□□□□ -1.1
PTPRR-204ENST00000440835 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.2□□□□□ -1.1
PTPRR-204ENST00000440835 MIER1Q8N108 512 aa8.2□□□□□ -1.1
PTPRR-204ENST00000440835 FBLN1P23142 703 aa8.19□□□□□ -1.1
PTPRR-204ENST00000440835 SUPT16HQ9Y5B9 1047 aaKnown RBP8.19□□□□□ -1.1
PTPRR-204ENST00000440835 C10orf71Q711Q0 1435 aa8.19□□□□□ -1.1
PTPRR-204ENST00000440835 SCN11AQ9UI33 1791 aa8.18□□□□□ -1.1
PTPRR-204ENST00000440835 ATP6V1AP38606 617 aa8.18□□□□□ -1.1
PTPRR-204ENST00000440835 KCNQ4P56696 695 aa8.18□□□□□ -1.1
PTPRR-204ENST00000440835 LINC00116Q8NCU8 138 aa8.18□□□□□ -1.1
PTPRR-204ENST00000440835 GPBP1L1Q9HC44 474 aaPredicted RBP8.18□□□□□ -1.1
PTPRR-204ENST00000440835 CCDC87Q9NVE4 849 aa8.18□□□□□ -1.1
PTPRR-204ENST00000440835 RTCBQ9Y3I0 505 aaKnown RBP8.18□□□□□ -1.1
PTPRR-204ENST00000440835 BRCA1P38398 1863 aaKnown RBP8.18□□□□□ -1.1
PTPRR-204ENST00000440835 EIF4A2Q14240 407 aaKnown RBP8.18□□□□□ -1.1
PTPRR-204ENST00000440835 TRAPPC3LQ5T215 181 aa8.18□□□□□ -1.1
PTPRR-204ENST00000440835 RPS6KA4O75676 772 aa8.17□□□□□ -1.1
PTPRR-204ENST00000440835 EIF4G2P78344 907 aaKnown RBP eCLIP8.17□□□□□ -1.1
PTPRR-204ENST00000440835 ATG3Q9NT62 314 aa8.17□□□□□ -1.1
PTPRR-204ENST00000440835 ZNF316A6NFI3 1004 aaPredicted RBP8.17□□□□□ -1.1
PTPRR-204ENST00000440835 GNPATO15228 680 aa8.17□□□□□ -1.1
PTPRR-204ENST00000440835 MSL1Q68DK7 614 aa8.17□□□□□ -1.1
PTPRR-204ENST00000440835 PXDNLA1KZ92 1463 aa8.17□□□□□ -1.1
PTPRR-204ENST00000440835 ZC3H4Q9UPT8 1303 aaKnown RBP8.16□□□□□ -1.1
PTPRR-204ENST00000440835 HSPA6P17066 643 aa8.16□□□□□ -1.1
PTPRR-204ENST00000440835 ITPK1Q13572 414 aa8.16□□□□□ -1.1
PTPRR-204ENST00000440835 ADAMTS7Q9UKP4 1686 aa8.16□□□□□ -1.1
PTPRR-204ENST00000440835 MRC1P22897 1456 aa8.16□□□□□ -1.1
PTPRR-204ENST00000440835 TJP1Q07157 1748 aa8.16□□□□□ -1.1
PTPRR-204ENST00000440835 PPM1GO15355 546 aaPredicted RBP8.16□□□□□ -1.1
PTPRR-204ENST00000440835 ASAP1Q9ULH1 1129 aa8.16□□□□□ -1.1
PTPRR-204ENST00000440835 CABP4P57796 275 aa8.15□□□□□ -1.1
PTPRR-204ENST00000440835 C1orf141Q5JVX7 400 aa8.15□□□□□ -1.1
PTPRR-204ENST00000440835 PARP3Q9Y6F1 533 aa8.15□□□□□ -1.1
PTPRR-204ENST00000440835 PDZRN3Q9UPQ7 1066 aa8.15□□□□□ -1.11
PTPRR-204ENST00000440835 TNRC6CQ9HCJ0 1690 aaKnown RBP8.14□□□□□ -1.11
PTPRR-204ENST00000440835 PHF14O94880 888 aa8.14□□□□□ -1.11
PTPRR-204ENST00000440835 MMP10P09238 476 aa8.14□□□□□ -1.11
PTPRR-204ENST00000440835 RFC4P35249 363 aa8.14□□□□□ -1.11
PTPRR-204ENST00000440835 KDM6AO15550 1401 aaPredicted RBP8.14□□□□□ -1.11
PTPRR-204ENST00000440835 APLP1P51693 650 aa8.14□□□□□ -1.11
PTPRR-204ENST00000440835 ZNF530Q6P9A1 599 aaPredicted RBP8.14□□□□□ -1.11
PTPRR-204ENST00000440835 N4BP2Q86UW6 1770 aaPredicted RBP8.14□□□□□ -1.11
PTPRR-204ENST00000440835 NRXN2Q9P2S2 1712 aa8.14□□□□□ -1.11
PTPRR-204ENST00000440835 VIRMAQ69YN4 1812 aaKnown RBP8.14□□□□□ -1.11
PTPRR-204ENST00000440835 DLEC1Q9Y238 1755 aa8.13□□□□□ -1.11
PTPRR-204ENST00000440835 TULP1O00294 542 aaPredicted RBP8.13□□□□□ -1.11
PTPRR-204ENST00000440835 AKAP4Q5JQC9 854 aa8.13□□□□□ -1.11
PTPRR-204ENST00000440835 IFFO2Q5TF58 517 aa8.13□□□□□ -1.11
PTPRR-204ENST00000440835 VSIG10Q8N0Z9 540 aa8.13□□□□□ -1.11
PTPRR-204ENST00000440835 MYH14Q7Z406 1995 aaKnown RBP8.13□□□□□ -1.11
PTPRR-204ENST00000440835 MTHFSP49914 203 aa8.13□□□□□ -1.11
PTPRR-204ENST00000440835 MORC1Q86VD1 984 aa8.13□□□□□ -1.11
PTPRR-204ENST00000440835 ARHGEF1Q92888 912 aaKnown RBP8.13□□□□□ -1.11
PTPRR-204ENST00000440835 NPC1L1Q9UHC9 1359 aa8.13□□□□□ -1.11
PTPRR-204ENST00000440835 GYS1P13807 737 aa8.12□□□□□ -1.11
PTPRR-204ENST00000440835 PANK3Q9H999 370 aa8.12□□□□□ -1.11
PTPRR-204ENST00000440835 KNSTRNQ9Y448 316 aa8.12□□□□□ -1.11
PTPRR-204ENST00000440835 UBR2Q8IWV8 1755 aa8.12□□□□□ -1.11
PTPRR-204ENST00000440835 TOMM70O94826 608 aa8.12□□□□□ -1.11
PTPRR-204ENST00000440835 RBM46Q8TBY0 533 aaKnown RBP8.12□□□□□ -1.11
PTPRR-204ENST00000440835 PIM2Q9P1W9 311 aa8.12□□□□□ -1.11
PTPRR-204ENST00000440835 USP42Q9H9J4 1324 aaKnown RBP8.12□□□□□ -1.11
PTPRR-204ENST00000440835 FSTL1Q12841 308 aa8.11□□□□□ -1.11
PTPRR-204ENST00000440835 AMIGO3Q86WK7 504 aa8.11□□□□□ -1.11
PTPRR-204ENST00000440835 RBM42Q9BTD8 480 aaKnown RBP8.11□□□□□ -1.11
PTPRR-204ENST00000440835 KIF3CO14782 793 aa8.11□□□□□ -1.11
PTPRR-204ENST00000440835 IL13P35225 146 aa8.11□□□□□ -1.11
PTPRR-204ENST00000440835 KDM2BQ8NHM5 1336 aa8.11□□□□□ -1.11
PTPRR-204ENST00000440835 A0A087WZG4 1122 aa8.11□□□□□ -1.11
PTPRR-204ENST00000440835 HSPA5P11021 654 aaKnown RBP8.11□□□□□ -1.11
PTPRR-204ENST00000440835 SLC4A9Q96Q91 983 aa8.11□□□□□ -1.11
PTPRR-204ENST00000440835 CRKLP46109 303 aaKnown RBP8.1□□□□□ -1.11
PTPRR-204ENST00000440835 DALRD3Q5D0E6 543 aaKnown RBP8.1□□□□□ -1.11
PTPRR-204ENST00000440835 TEX13AQ9BXU3 409 aaPredicted RBP8.1□□□□□ -1.11
PTPRR-204ENST00000440835 SLC52A2Q9HAB3 445 aa8.1□□□□□ -1.11
PTPRR-204ENST00000440835 WDR90Q96KV7 1748 aa8.1□□□□□ -1.11
PTPRR-204ENST00000440835 SBF1O95248 1867 aa8.1□□□□□ -1.11
PTPRR-204ENST00000440835 RGL2O15211 777 aa8.09□□□□□ -1.11
PTPRR-204ENST00000440835 FCHSD2O94868 740 aa8.09□□□□□ -1.11
PTPRR-204ENST00000440835 TM4SF1P30408 202 aa8.09□□□□□ -1.11
PTPRR-204ENST00000440835 SOS1Q07889 1333 aaPredicted RBP8.09□□□□□ -1.11
PTPRR-204ENST00000440835 ZPR1O75312 459 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms