RNA–Protein interactions for RNA: ENST00000440647.1

CHD6-204, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 3

Gene CHD6, Length 536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-204ENST00000440647 FSHRP23945 695 aa9.6□□□□□ -0.87
CHD6-204ENST00000440647 TMEM132AQ24JP5 1023 aa9.6□□□□□ -0.87
CHD6-204ENST00000440647 KCTD15Q96SI1 283 aaPredicted RBP9.6□□□□□ -0.87
CHD6-204ENST00000440647 PCF11O94913 1555 aaKnown RBP9.59□□□□□ -0.87
CHD6-204ENST00000440647 PLCH2O75038 1416 aa9.59□□□□□ -0.87
CHD6-204ENST00000440647 CLIP1P30622 1438 aa9.59□□□□□ -0.87
CHD6-204ENST00000440647 UPP2O95045 317 aa9.59□□□□□ -0.87
CHD6-204ENST00000440647 DZIP3Q86Y13 1208 aaKnown RBP9.59□□□□□ -0.87
CHD6-204ENST00000440647 PRM3Q9NNZ6 103 aa9.59□□□□□ -0.87
CHD6-204ENST00000440647 SCAPERQ9BY12 1400 aa9.58□□□□□ -0.88
CHD6-204ENST00000440647 GPR37L1O60883 481 aa9.58□□□□□ -0.88
CHD6-204ENST00000440647 ZIC2O95409 532 aaPredicted RBP9.58□□□□□ -0.88
CHD6-204ENST00000440647 FBXO45P0C2W1 286 aa9.58□□□□□ -0.88
CHD6-204ENST00000440647 CCDC116Q8IYX3 515 aa9.58□□□□□ -0.88
CHD6-204ENST00000440647 ITPKCQ96DU7 683 aa9.58□□□□□ -0.88
CHD6-204ENST00000440647 LRRIQ1Q96JM4 1722 aa9.58□□□□□ -0.88
CHD6-204ENST00000440647 YEATS2Q9ULM3 1422 aa9.57□□□□□ -0.88
CHD6-204ENST00000440647 ARHGAP5Q13017 1502 aa9.57□□□□□ -0.88
CHD6-204ENST00000440647 SIGLEC1Q9BZZ2 1709 aa9.57□□□□□ -0.88
CHD6-204ENST00000440647 PURBQ96QR8 312 aaKnown RBP9.57□□□□□ -0.88
CHD6-204ENST00000440647 EMILIN1Q9Y6C2 1016 aa9.57□□□□□ -0.88
CHD6-204ENST00000440647 TROQ12816 1431 aaPredicted RBP9.56□□□□□ -0.88
CHD6-204ENST00000440647 LMTK3Q96Q04 1460 aa9.56□□□□□ -0.88
CHD6-204ENST00000440647 NR1H3Q13133 447 aa9.56□□□□□ -0.88
CHD6-204ENST00000440647 NBPF20Q3BBV1 942 aa9.56□□□□□ -0.88
CHD6-204ENST00000440647 EFCAB2Q5VUJ9 269 aa9.56□□□□□ -0.88
CHD6-204ENST00000440647 ZFAND3Q9H8U3 227 aa9.56□□□□□ -0.88
CHD6-204ENST00000440647 CCDC18Q5T9S5 1454 aa9.55□□□□□ -0.88
CHD6-204ENST00000440647 ZNF518AQ6AHZ1 1483 aa9.55□□□□□ -0.88
CHD6-204ENST00000440647 DHX9Q08211 1270 aaKnown RBP9.55□□□□□ -0.88
CHD6-204ENST00000440647 MLECQ14165 292 aa9.55□□□□□ -0.88
CHD6-204ENST00000440647 INTS6LQ5JSJ4 861 aaKnown RBP9.55□□□□□ -0.88
CHD6-204ENST00000440647 TBC1D2BQ9UPU7 963 aa9.55□□□□□ -0.88
CHD6-204ENST00000440647 C9orf84Q5VXU9 1444 aa9.55□□□□□ -0.88
CHD6-204ENST00000440647 ATP10AO60312 1499 aa9.54□□□□□ -0.88
CHD6-204ENST00000440647 PREX2Q70Z35 1606 aa9.54□□□□□ -0.88
CHD6-204ENST00000440647 H3BM21 787 aa9.54□□□□□ -0.88
CHD6-204ENST00000440647 PPP1R26Q5T8A7 1209 aaPredicted RBP9.54□□□□□ -0.88
CHD6-204ENST00000440647 ZNF330Q9Y3S2 320 aaPredicted RBP9.54□□□□□ -0.88
CHD6-204ENST00000440647 CDC42BPBQ9Y5S2 1711 aa9.53□□□□□ -0.88
CHD6-204ENST00000440647 MCCD1P59942 119 aaPredicted RBP9.53□□□□□ -0.88
CHD6-204ENST00000440647 MCM6Q14566 821 aa9.53□□□□□ -0.88
CHD6-204ENST00000440647 PGPEP1Q9NXJ5 209 aa9.53□□□□□ -0.88
CHD6-204ENST00000440647 PCDHB9Q9Y5E1 797 aa9.53□□□□□ -0.88
CHD6-204ENST00000440647 KDM5CP41229 1560 aa9.53□□□□□ -0.88
CHD6-204ENST00000440647 PREX1Q8TCU6 1659 aa9.52□□□□□ -0.89
CHD6-204ENST00000440647 ESPNB1AK53 854 aa9.52□□□□□ -0.89
CHD6-204ENST00000440647 MAN1A2O60476 641 aa9.52□□□□□ -0.89
CHD6-204ENST00000440647 ITSN2Q9NZM3 1697 aa9.51□□□□□ -0.89
CHD6-204ENST00000440647 ARHGEF12Q9NZN5 1544 aa9.51□□□□□ -0.89
CHD6-204ENST00000440647 CASKIN1Q8WXD9 1431 aa9.51□□□□□ -0.89
CHD6-204ENST00000440647 BMP2P12643 396 aa9.51□□□□□ -0.89
CHD6-204ENST00000440647 GMPRP36959 345 aa9.51□□□□□ -0.89
CHD6-204ENST00000440647 SEPT12Q8IYM1 358 aa9.51□□□□□ -0.89
CHD6-204ENST00000440647 FBXO41Q8TF61 875 aa9.51□□□□□ -0.89
CHD6-204ENST00000440647 ZNF592Q92610 1267 aa9.51□□□□□ -0.89
CHD6-204ENST00000440647 DIP2CQ9Y2E4 1556 aa9.5□□□□□ -0.89
CHD6-204ENST00000440647 GIGYF1O75420 1035 aaPredicted RBP9.5□□□□□ -0.89
CHD6-204ENST00000440647 LCE2CQ5TA81 110 aa9.5□□□□□ -0.89
CHD6-204ENST00000440647 MEIOBQ8N635 442 aa9.5□□□□□ -0.89
CHD6-204ENST00000440647 GDPD2Q9HCC8 539 aa9.5□□□□□ -0.89
CHD6-204ENST00000440647 FYCO1Q9BQS8 1478 aa9.5□□□□□ -0.89
CHD6-204ENST00000440647 CDC42BPAQ5VT25 1732 aa9.5□□□□□ -0.89
CHD6-204ENST00000440647 ABCC1P33527 1531 aa9.5□□□□□ -0.89
CHD6-204ENST00000440647 ABCA6Q8N139 1617 aa9.49□□□□□ -0.89
CHD6-204ENST00000440647 VEGFBP49765 207 aa9.49□□□□□ -0.89
CHD6-204ENST00000440647 HSPA2P54652 639 aa9.49□□□□□ -0.89
CHD6-204ENST00000440647 IRF5Q13568 498 aa9.49□□□□□ -0.89
CHD6-204ENST00000440647 C6orf118Q5T5N4 469 aa9.49□□□□□ -0.89
CHD6-204ENST00000440647 ZSCAN1Q8NBB4 408 aa9.49□□□□□ -0.89
CHD6-204ENST00000440647 TSEN34Q9BSV6 310 aaKnown RBP9.49□□□□□ -0.89
CHD6-204ENST00000440647 REREQ9P2R6 1566 aa9.49□□□□□ -0.89
CHD6-204ENST00000440647 ERVH48-1M5A8F1 160 aa9.48□□□□□ -0.89
CHD6-204ENST00000440647 RAB15P59190 212 aa9.48□□□□□ -0.89
CHD6-204ENST00000440647 FLIIQ13045 1269 aa9.48□□□□□ -0.89
CHD6-204ENST00000440647 Q6ZVU0 165 aa9.48□□□□□ -0.89
CHD6-204ENST00000440647 AFAP1Q8N556 730 aa9.48□□□□□ -0.89
CHD6-204ENST00000440647 CBLBQ13191 982 aa9.47□□□□□ -0.89
CHD6-204ENST00000440647 RNF20Q5VTR2 975 aa9.47□□□□□ -0.89
CHD6-204ENST00000440647 CCDC125Q86Z20 511 aa9.47□□□□□ -0.89
CHD6-204ENST00000440647 LINC00528Q8N1L1 170 aa9.47□□□□□ -0.89
CHD6-204ENST00000440647 ESF1Q9H501 851 aaKnown RBP9.47□□□□□ -0.89
CHD6-204ENST00000440647 TMPRSS4Q9NRS4 437 aa9.47□□□□□ -0.89
CHD6-204ENST00000440647 TIMELESSQ9UNS1 1208 aa9.47□□□□□ -0.89
CHD6-204ENST00000440647 MLH3Q9UHC1 1453 aa9.47□□□□□ -0.89
CHD6-204ENST00000440647 ABL2P42684 1182 aa9.46□□□□□ -0.9
CHD6-204ENST00000440647 TRIM52Q96A61 297 aa9.46□□□□□ -0.9
CHD6-204ENST00000440647 C3P01024 1663 aa9.45□□□□□ -0.9
CHD6-204ENST00000440647 KIDINS220Q9ULH0 1771 aa9.45□□□□□ -0.9
CHD6-204ENST00000440647 EIF4G2P78344 907 aaKnown RBP eCLIP9.45□□□□□ -0.9
CHD6-204ENST00000440647 WASHC4Q2M389 1173 aa9.45□□□□□ -0.9
CHD6-204ENST00000440647 ZNF784Q8NCA9 323 aaPredicted RBP9.45□□□□□ -0.9
CHD6-204ENST00000440647 COG6Q9Y2V7 657 aa9.45□□□□□ -0.9
CHD6-204ENST00000440647 UHRF1BP1Q6BDS2 1440 aa9.45□□□□□ -0.9
CHD6-204ENST00000440647 TRAPPC8Q9Y2L5 1435 aa9.45□□□□□ -0.9
CHD6-204ENST00000440647 CEBPAP49715 358 aaPredicted RBP9.44□□□□□ -0.9
CHD6-204ENST00000440647 CEP126Q9P2H0 1117 aa9.44□□□□□ -0.9
CHD6-204ENST00000440647 ZNF777Q9ULD5 760 aaPredicted RBP9.44□□□□□ -0.9
CHD6-204ENST00000440647 AGLP35573 1532 aa9.44□□□□□ -0.9
CHD6-204ENST00000440647 SYCP2Q9BX26 1530 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms