RNA–Protein interactions for RNA: ENST00000440571.5

CNOT3-203, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 1,125 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-203ENST00000440571 SLC15A2Q16348 729 aa29.81■■■□□ 2.36
CNOT3-203ENST00000440571 TOGARAM1Q9Y4F4 1720 aa29.81■■■□□ 2.36
CNOT3-203ENST00000440571 RBM42Q9BTD8 480 aaKnown RBP29.8■■■□□ 2.36
CNOT3-203ENST00000440571 CCDC146Q8IYE0 955 aa29.79■■■□□ 2.36
CNOT3-203ENST00000440571 MRS2Q9HD23 443 aa29.79■■■□□ 2.36
CNOT3-203ENST00000440571 RGPD3A6NKT7 1758 aaPredicted RBP29.79■■■□□ 2.36
CNOT3-203ENST00000440571 RGPD4Q7Z3J3 1758 aa29.79■■■□□ 2.36
CNOT3-203ENST00000440571 RUNDC1Q96C34 613 aa29.78■■■□□ 2.36
CNOT3-203ENST00000440571 ATP6V1AP38606 617 aa29.77■■■□□ 2.36
CNOT3-203ENST00000440571 MCM10Q7L590 875 aa29.77■■■□□ 2.36
CNOT3-203ENST00000440571 RREB1Q92766 1687 aa29.76■■■□□ 2.36
CNOT3-203ENST00000440571 PTCD1O75127 700 aaKnown RBP29.75■■■□□ 2.35
CNOT3-203ENST00000440571 DCTN1Q14203 1278 aa29.75■■■□□ 2.35
CNOT3-203ENST00000440571 AKT1S1Q96B36 256 aa29.75■■■□□ 2.35
CNOT3-203ENST00000440571 ITGB4P16144 1822 aa29.75■■■□□ 2.35
CNOT3-203ENST00000440571 RIPK4P57078 832 aa29.74■■■□□ 2.35
CNOT3-203ENST00000440571 SLC39A6Q13433 755 aa29.74■■■□□ 2.35
CNOT3-203ENST00000440571 TMPOP42166 694 aaKnown RBP29.73■■■□□ 2.35
CNOT3-203ENST00000440571 ZNF827Q17R98 1081 aa29.73■■■□□ 2.35
CNOT3-203ENST00000440571 TFCP2L1Q9NZI6 479 aa29.73■■■□□ 2.35
CNOT3-203ENST00000440571 CEMIPQ8WUJ3 1361 aa29.73■■■□□ 2.35
CNOT3-203ENST00000440571 NUP188Q5SRE5 1749 aa29.73■■■□□ 2.35
CNOT3-203ENST00000440571 PNISRQ8TF01 805 aaKnown RBP29.71■■■□□ 2.35
CNOT3-203ENST00000440571 ITPK1Q13572 414 aa29.7■■■□□ 2.35
CNOT3-203ENST00000440571 TTC5Q8N0Z6 440 aa29.7■■■□□ 2.35
CNOT3-203ENST00000440571 SLC4A9Q96Q91 983 aa29.7■■■□□ 2.35
CNOT3-203ENST00000440571 BTBD11A6QL63 1104 aa29.69■■■□□ 2.34
CNOT3-203ENST00000440571 NEUROD2Q15784 382 aa29.69■■■□□ 2.34
CNOT3-203ENST00000440571 LINC00116Q8NCU8 138 aa29.68■■■□□ 2.34
CNOT3-203ENST00000440571 RRP7AQ9Y3A4 280 aaKnown RBP29.68■■■□□ 2.34
CNOT3-203ENST00000440571 LMOD3Q0VAK6 560 aa29.67■■■□□ 2.34
CNOT3-203ENST00000440571 TAF7Q15545 349 aaPredicted RBP29.67■■■□□ 2.34
CNOT3-203ENST00000440571 MRC1P22897 1456 aa29.67■■■□□ 2.34
CNOT3-203ENST00000440571 ZNF790Q6PG37 636 aa29.66■■■□□ 2.34
CNOT3-203ENST00000440571 AK7Q96M32 723 aa29.66■■■□□ 2.34
CNOT3-203ENST00000440571 SCN11AQ9UI33 1791 aa29.66■■■□□ 2.34
CNOT3-203ENST00000440571 LY75O60449 1722 aa29.65■■■□□ 2.34
CNOT3-203ENST00000440571 THUMPD2Q9BTF0 503 aaKnown RBP29.64■■■□□ 2.34
CNOT3-203ENST00000440571 PDGFDQ9GZP0 370 aaPredicted RBP29.64■■■□□ 2.34
CNOT3-203ENST00000440571 APAF1O14727 1248 aa29.63■■■□□ 2.33
CNOT3-203ENST00000440571 ADAMTS7Q9UKP4 1686 aa29.63■■■□□ 2.33
CNOT3-203ENST00000440571 DIEXFQ68CQ4 756 aaKnown RBP29.62■■■□□ 2.33
CNOT3-203ENST00000440571 VSIG10Q8N0Z9 540 aa29.61■■■□□ 2.33
CNOT3-203ENST00000440571 MSH5O43196 834 aa29.6■■■□□ 2.33
CNOT3-203ENST00000440571 KCNQ3O43525 872 aa29.6■■■□□ 2.33
CNOT3-203ENST00000440571 RC3H1Q5TC82 1133 aaKnown RBP29.6■■■□□ 2.33
CNOT3-203ENST00000440571 ZNF496Q96IT1 587 aaPredicted RBP29.6■■■□□ 2.33
CNOT3-203ENST00000440571 MIS18AQ9NYP9 233 aa29.6■■■□□ 2.33
CNOT3-203ENST00000440571 DNAJC10Q8IXB1 793 aa29.59■■■□□ 2.33
CNOT3-203ENST00000440571 FLAD1Q8NFF5 587 aa29.59■■■□□ 2.33
CNOT3-203ENST00000440571 FMNL2Q96PY5 1086 aa29.59■■■□□ 2.33
CNOT3-203ENST00000440571 PNPLA7Q6ZV29 1317 aa29.59■■■□□ 2.33
CNOT3-203ENST00000440571 PAPPAQ13219 1627 aa29.59■■■□□ 2.33
CNOT3-203ENST00000440571 GNPATO15228 680 aa29.57■■■□□ 2.32
CNOT3-203ENST00000440571 ZBTB7AO95365 584 aa29.57■■■□□ 2.32
CNOT3-203ENST00000440571 FAM9BQ8IZU0 186 aa29.57■■■□□ 2.32
CNOT3-203ENST00000440571 TRIM35Q9UPQ4 493 aa29.57■■■□□ 2.32
CNOT3-203ENST00000440571 COL23A1Q86Y22 540 aaPredicted RBP29.56■■■□□ 2.32
CNOT3-203ENST00000440571 SPON1Q9HCB6 807 aa29.56■■■□□ 2.32
CNOT3-203ENST00000440571 SLC16A10Q8TF71 515 aa29.55■■■□□ 2.32
CNOT3-203ENST00000440571 TEX13AQ9BXU3 409 aaPredicted RBP29.55■■■□□ 2.32
CNOT3-203ENST00000440571 RTCBQ9Y3I0 505 aaKnown RBP29.55■■■□□ 2.32
CNOT3-203ENST00000440571 CNTNAP4Q9C0A0 1308 aa29.54■■■□□ 2.32
CNOT3-203ENST00000440571 PHF14O94880 888 aa29.54■■■□□ 2.32
CNOT3-203ENST00000440571 CRKLP46109 303 aaKnown RBP29.54■■■□□ 2.32
CNOT3-203ENST00000440571 SMIM5Q71RC9 77 aa29.54■■■□□ 2.32
CNOT3-203ENST00000440571 ATF5Q9Y2D1 282 aaPredicted RBP29.54■■■□□ 2.32
CNOT3-203ENST00000440571 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.53■■■□□ 2.32
CNOT3-203ENST00000440571 STARD3NLO95772 234 aa29.53■■■□□ 2.32
CNOT3-203ENST00000440571 CYP19A1P11511 503 aaPredicted RBP29.53■■■□□ 2.32
CNOT3-203ENST00000440571 SSFA2P28290 1259 aa29.53■■■□□ 2.32
CNOT3-203ENST00000440571 HEG1Q9ULI3 1381 aa29.52■■■□□ 2.32
CNOT3-203ENST00000440571 RPS6KA4O75676 772 aa29.52■■■□□ 2.32
CNOT3-203ENST00000440571 AMIGO3Q86WK7 504 aa29.52■■■□□ 2.32
CNOT3-203ENST00000440571 MTFR1LQ9H019 292 aa29.52■■■□□ 2.32
CNOT3-203ENST00000440571 TRAPPC3LQ5T215 181 aa29.51■■■□□ 2.31
CNOT3-203ENST00000440571 TSPYL4Q9UJ04 414 aa29.51■■■□□ 2.31
CNOT3-203ENST00000440571 KCPQ6ZWJ8 1503 aa29.5■■■□□ 2.31
CNOT3-203ENST00000440571 CCER2I3L3R5 266 aa29.5■■■□□ 2.31
CNOT3-203ENST00000440571 INTS5Q6P9B9 1019 aaKnown RBP29.5■■■□□ 2.31
CNOT3-203ENST00000440571 CCDC87Q9NVE4 849 aa29.5■■■□□ 2.31
CNOT3-203ENST00000440571 BABAM1Q9NWV8 329 aa29.5■■■□□ 2.31
CNOT3-203ENST00000440571 SNRPA1P09661 255 aaKnown RBP29.49■■■□□ 2.31
CNOT3-203ENST00000440571 LAS1LQ9Y4W2 734 aaKnown RBP29.49■■■□□ 2.31
CNOT3-203ENST00000440571 C4BP0C0L5 1744 aa29.48■■■□□ 2.31
CNOT3-203ENST00000440571 C5P01031 1676 aa29.48■■■□□ 2.31
CNOT3-203ENST00000440571 SENP3-EIF4A1A0A087X0R7 540 aa29.46■■■□□ 2.31
CNOT3-203ENST00000440571 ADRA2BP18089 450 aa29.46■■■□□ 2.31
CNOT3-203ENST00000440571 EIF4A1P60842 406 aaKnown RBP29.45■■■□□ 2.31
CNOT3-203ENST00000440571 CALD1Q05682 793 aaKnown RBP29.45■■■□□ 2.31
CNOT3-203ENST00000440571 ARHGEF1Q92888 912 aaKnown RBP29.45■■■□□ 2.31
CNOT3-203ENST00000440571 USP16Q9Y5T5 823 aa29.45■■■□□ 2.31
CNOT3-203ENST00000440571 VIRMAQ69YN4 1812 aaKnown RBP29.45■■■□□ 2.3
CNOT3-203ENST00000440571 ZNF831Q5JPB2 1677 aa29.44■■■□□ 2.3
CNOT3-203ENST00000440571 CHL1O00533 1208 aa29.44■■■□□ 2.3
CNOT3-203ENST00000440571 DLG5Q8TDM6 1919 aa29.43■■■□□ 2.3
CNOT3-203ENST00000440571 CANXP27824 592 aaKnown RBP29.43■■■□□ 2.3
CNOT3-203ENST00000440571 RFC4P35249 363 aa29.43■■■□□ 2.3
CNOT3-203ENST00000440571 MIER1Q8N108 512 aa29.43■■■□□ 2.3
CNOT3-203ENST00000440571 TAF1LQ8IZX4 1826 aa29.43■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms