RNA–Protein interactions for RNA: ENST00000440099.1

AP000350.3-201, humanhuman

BASIC

Gene AP000350.3, Length 289 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000350.3-201ENST00000440099 EIF4A2Q14240 407 aaKnown RBP12.38□□□□□ -0.43
AP000350.3-201ENST00000440099 TRAPPC3LQ5T215 181 aa12.38□□□□□ -0.43
AP000350.3-201ENST00000440099 AMIGO3Q86WK7 504 aa12.38□□□□□ -0.43
AP000350.3-201ENST00000440099 ATG3Q9NT62 314 aa12.38□□□□□ -0.43
AP000350.3-201ENST00000440099 RTCBQ9Y3I0 505 aaKnown RBP12.38□□□□□ -0.43
AP000350.3-201ENST00000440099 ITPK1Q13572 414 aa12.37□□□□□ -0.43
AP000350.3-201ENST00000440099 PLEKHO1Q53GL0 409 aaPredicted RBP12.37□□□□□ -0.43
AP000350.3-201ENST00000440099 SMIM5Q71RC9 77 aa12.37□□□□□ -0.43
AP000350.3-201ENST00000440099 NLGN1Q8N2Q7 840 aa12.37□□□□□ -0.43
AP000350.3-201ENST00000440099 DCAF5Q96JK2 942 aa12.37□□□□□ -0.43
AP000350.3-201ENST00000440099 RBM42Q9BTD8 480 aaKnown RBP12.37□□□□□ -0.43
AP000350.3-201ENST00000440099 MMP10P09238 476 aa12.36□□□□□ -0.43
AP000350.3-201ENST00000440099 ADRA2BP18089 450 aa12.36□□□□□ -0.43
AP000350.3-201ENST00000440099 AMOTQ4VCS5 1084 aa12.36□□□□□ -0.43
AP000350.3-201ENST00000440099 ZNF526Q8TF50 670 aaPredicted RBP12.36□□□□□ -0.43
AP000350.3-201ENST00000440099 WWC3Q9ULE0 1092 aa12.36□□□□□ -0.43
AP000350.3-201ENST00000440099 ADCY9O60503 1353 aa12.35□□□□□ -0.43
AP000350.3-201ENST00000440099 RFC4P35249 363 aa12.35□□□□□ -0.43
AP000350.3-201ENST00000440099 CABP4P57796 275 aa12.35□□□□□ -0.43
AP000350.3-201ENST00000440099 TGFB2P61812 414 aa12.35□□□□□ -0.43
AP000350.3-201ENST00000440099 EIF4G2P78344 907 aaKnown RBP eCLIP12.35□□□□□ -0.43
AP000350.3-201ENST00000440099 RC3H1Q5TC82 1133 aaKnown RBP12.35□□□□□ -0.43
AP000350.3-201ENST00000440099 C1orf141Q5JVX7 400 aa12.34□□□□□ -0.43
AP000350.3-201ENST00000440099 CCDC87Q9NVE4 849 aa12.34□□□□□ -0.43
AP000350.3-201ENST00000440099 HSPA6P17066 643 aa12.33□□□□□ -0.44
AP000350.3-201ENST00000440099 MTHFSP49914 203 aa12.33□□□□□ -0.44
AP000350.3-201ENST00000440099 ZNF530Q6P9A1 599 aaPredicted RBP12.33□□□□□ -0.44
AP000350.3-201ENST00000440099 PANK3Q9H999 370 aa12.33□□□□□ -0.44
AP000350.3-201ENST00000440099 PARP3Q9Y6F1 533 aa12.33□□□□□ -0.44
AP000350.3-201ENST00000440099 CNTNAP4Q9C0A0 1308 aa12.33□□□□□ -0.44
AP000350.3-201ENST00000440099 ZNF831Q5JPB2 1677 aa12.32□□□□□ -0.44
AP000350.3-201ENST00000440099 KDRP35968 1356 aa12.32□□□□□ -0.44
AP000350.3-201ENST00000440099 RPS6KA4O75676 772 aa12.32□□□□□ -0.44
AP000350.3-201ENST00000440099 MORC1Q86VD1 984 aa12.32□□□□□ -0.44
AP000350.3-201ENST00000440099 ARHGEF1Q92888 912 aaKnown RBP12.32□□□□□ -0.44
AP000350.3-201ENST00000440099 BCS1LQ9Y276 419 aa12.32□□□□□ -0.44
AP000350.3-201ENST00000440099 CICQ96RK0 1608 aaPredicted RBP12.3□□□□□ -0.44
AP000350.3-201ENST00000440099 PXDNLA1KZ92 1463 aa12.3□□□□□ -0.44
AP000350.3-201ENST00000440099 A0A0G2JLW4 131 aa12.3□□□□□ -0.44
AP000350.3-201ENST00000440099 PTCD1O75127 700 aaKnown RBP12.3□□□□□ -0.44
AP000350.3-201ENST00000440099 GYS1P13807 737 aa12.3□□□□□ -0.44
AP000350.3-201ENST00000440099 SLC4A9Q96Q91 983 aa12.3□□□□□ -0.44
AP000350.3-201ENST00000440099 KNSTRNQ9Y448 316 aa12.3□□□□□ -0.44
AP000350.3-201ENST00000440099 FCHSD2O94868 740 aa12.29□□□□□ -0.44
AP000350.3-201ENST00000440099 HSPA5P11021 654 aaKnown RBP12.29□□□□□ -0.44
AP000350.3-201ENST00000440099 IFFO2Q5TF58 517 aa12.29□□□□□ -0.44
AP000350.3-201ENST00000440099 ARHGAP27Q6ZUM4 889 aa12.29□□□□□ -0.44
AP000350.3-201ENST00000440099 NFATC2IPQ8NCF5 419 aa12.29□□□□□ -0.44
AP000350.3-201ENST00000440099 KIF13BQ9NQT8 1826 aa12.29□□□□□ -0.44
AP000350.3-201ENST00000440099 KDM6AO15550 1401 aaPredicted RBP12.28□□□□□ -0.44
AP000350.3-201ENST00000440099 C10orf71Q711Q0 1435 aa12.28□□□□□ -0.44
AP000350.3-201ENST00000440099 SULT6B1Q6IMI4 303 aa12.28□□□□□ -0.44
AP000350.3-201ENST00000440099 COL5A3P25940 1745 aaPredicted RBP12.28□□□□□ -0.44
AP000350.3-201ENST00000440099 KIF3CO14782 793 aa12.27□□□□□ -0.45
AP000350.3-201ENST00000440099 TOMM70O94826 608 aa12.27□□□□□ -0.45
AP000350.3-201ENST00000440099 DPEP1P16444 411 aa12.27□□□□□ -0.45
AP000350.3-201ENST00000440099 CRKLP46109 303 aaKnown RBP12.27□□□□□ -0.45
AP000350.3-201ENST00000440099 AEBP1Q8IUX7 1158 aa12.27□□□□□ -0.45
AP000350.3-201ENST00000440099 PIM2Q9P1W9 311 aa12.27□□□□□ -0.45
AP000350.3-201ENST00000440099 C4AP0C0L4 1744 aa12.27□□□□□ -0.45
AP000350.3-201ENST00000440099 N4BP2Q86UW6 1770 aaPredicted RBP12.27□□□□□ -0.45
AP000350.3-201ENST00000440099 APLP1P51693 650 aa12.26□□□□□ -0.45
AP000350.3-201ENST00000440099 CEP350Q5VT06 3117 aa12.25□□□□□ -0.45
AP000350.3-201ENST00000440099 ZPR1O75312 459 aa12.25□□□□□ -0.45
AP000350.3-201ENST00000440099 DALRD3Q5D0E6 543 aaKnown RBP12.25□□□□□ -0.45
AP000350.3-201ENST00000440099 AKAP4Q5JQC9 854 aa12.25□□□□□ -0.45
AP000350.3-201ENST00000440099 USP42Q9H9J4 1324 aaKnown RBP12.25□□□□□ -0.45
AP000350.3-201ENST00000440099 IL13P35225 146 aa12.24□□□□□ -0.45
AP000350.3-201ENST00000440099 C16orf71Q8IYS4 520 aaPredicted RBP12.24□□□□□ -0.45
AP000350.3-201ENST00000440099 KIAA1551Q9HCM1 1747 aa12.24□□□□□ -0.45
AP000350.3-201ENST00000440099 MYH14Q7Z406 1995 aaKnown RBP12.23□□□□□ -0.45
AP000350.3-201ENST00000440099 FKBP8Q14318 412 aa12.23□□□□□ -0.45
AP000350.3-201ENST00000440099 C9orf131Q5VYM1 1079 aa12.23□□□□□ -0.45
AP000350.3-201ENST00000440099 SLC52A2Q9HAB3 445 aa12.23□□□□□ -0.45
AP000350.3-201ENST00000440099 SRP68Q9UHB9 627 aaKnown RBP12.23□□□□□ -0.45
AP000350.3-201ENST00000440099 KDM2BQ8NHM5 1336 aa12.22□□□□□ -0.45
AP000350.3-201ENST00000440099 KCNA3P22001 575 aa12.22□□□□□ -0.45
AP000350.3-201ENST00000440099 SCN11AQ9UI33 1791 aa12.21□□□□□ -0.45
AP000350.3-201ENST00000440099 DDR1Q08345 913 aa12.21□□□□□ -0.45
AP000350.3-201ENST00000440099 INTS5Q6P9B9 1019 aaKnown RBP12.21□□□□□ -0.45
AP000350.3-201ENST00000440099 DNAJC10Q8IXB1 793 aa12.21□□□□□ -0.45
AP000350.3-201ENST00000440099 NMRK2Q9NPI5 230 aa12.21□□□□□ -0.45
AP000350.3-201ENST00000440099 BRCA1P38398 1863 aaKnown RBP12.21□□□□□ -0.46
AP000350.3-201ENST00000440099 ARFGEF1Q9Y6D6 1849 aa12.21□□□□□ -0.46
AP000350.3-201ENST00000440099 TJP1Q07157 1748 aa12.2□□□□□ -0.46
AP000350.3-201ENST00000440099 POLRMTO00411 1230 aaKnown RBP12.2□□□□□ -0.46
AP000350.3-201ENST00000440099 TM4SF1P30408 202 aa12.2□□□□□ -0.46
AP000350.3-201ENST00000440099 USPL1Q5W0Q7 1092 aa12.2□□□□□ -0.46
AP000350.3-201ENST00000440099 RBM46Q8TBY0 533 aaKnown RBP12.2□□□□□ -0.46
AP000350.3-201ENST00000440099 LGR6Q9HBX8 967 aa12.2□□□□□ -0.46
AP000350.3-201ENST00000440099 RNF181Q9P0P0 153 aa12.2□□□□□ -0.46
AP000350.3-201ENST00000440099 SOS1Q07889 1333 aaPredicted RBP12.19□□□□□ -0.46
AP000350.3-201ENST00000440099 RNMTO43148 476 aaKnown RBP12.19□□□□□ -0.46
AP000350.3-201ENST00000440099 DIAPH1O60610 1272 aaKnown RBP12.19□□□□□ -0.46
AP000350.3-201ENST00000440099 HMOX1P09601 288 aa12.19□□□□□ -0.46
AP000350.3-201ENST00000440099 CYP19A1P11511 503 aaPredicted RBP12.19□□□□□ -0.46
AP000350.3-201ENST00000440099 CHRNA5P30532 468 aa12.19□□□□□ -0.46
AP000350.3-201ENST00000440099 AMER1Q5JTC6 1135 aaPredicted RBP12.19□□□□□ -0.46
AP000350.3-201ENST00000440099 VSIG10Q8N0Z9 540 aa12.19□□□□□ -0.46
AP000350.3-201ENST00000440099 NARFQ9UHQ1 456 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms