RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 GOLGB1Q14789 3259 aaKnown RBP21.81■■□□□ 1.08
ITGB1-207ENST00000439974 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.8■■□□□ 1.08
ITGB1-207ENST00000439974 ERVV-2B6SEH9 535 aa21.8■■□□□ 1.08
ITGB1-207ENST00000439974 SSFA2P28290 1259 aa21.8■■□□□ 1.08
ITGB1-207ENST00000439974 ATP6V1AP38606 617 aa21.8■■□□□ 1.08
ITGB1-207ENST00000439974 ZNF530Q6P9A1 599 aaPredicted RBP21.8■■□□□ 1.08
ITGB1-207ENST00000439974 AMIGO3Q86WK7 504 aa21.8■■□□□ 1.08
ITGB1-207ENST00000439974 ZNF784Q8NCA9 323 aaPredicted RBP21.8■■□□□ 1.08
ITGB1-207ENST00000439974 DCAF5Q96JK2 942 aa21.8■■□□□ 1.08
ITGB1-207ENST00000439974 ITPK1Q13572 414 aa21.79■■□□□ 1.08
ITGB1-207ENST00000439974 AEBP1Q8IUX7 1158 aa21.79■■□□□ 1.08
ITGB1-207ENST00000439974 KDRP35968 1356 aa21.77■■□□□ 1.08
ITGB1-207ENST00000439974 IL13P35225 146 aa21.77■■□□□ 1.08
ITGB1-207ENST00000439974 SULT6B1Q6IMI4 303 aa21.77■■□□□ 1.08
ITGB1-207ENST00000439974 KDM6AO15550 1401 aaPredicted RBP21.77■■□□□ 1.08
ITGB1-207ENST00000439974 GNPATO15228 680 aa21.76■■□□□ 1.07
ITGB1-207ENST00000439974 C1orf141Q5JVX7 400 aa21.76■■□□□ 1.07
ITGB1-207ENST00000439974 SMIM5Q71RC9 77 aa21.76■■□□□ 1.07
ITGB1-207ENST00000439974 CD2APQ9Y5K6 639 aa21.76■■□□□ 1.07
ITGB1-207ENST00000439974 ZNF831Q5JPB2 1677 aa21.75■■□□□ 1.07
ITGB1-207ENST00000439974 MTHFSP49914 203 aa21.74■■□□□ 1.07
ITGB1-207ENST00000439974 CABP4P57796 275 aa21.74■■□□□ 1.07
ITGB1-207ENST00000439974 GRIN3BO60391 1043 aa21.73■■□□□ 1.07
ITGB1-207ENST00000439974 RBM42Q9BTD8 480 aaKnown RBP21.73■■□□□ 1.07
ITGB1-207ENST00000439974 YBX3P16989 372 aaKnown RBP eCLIP21.72■■□□□ 1.07
ITGB1-207ENST00000439974 SLC4A9Q96Q91 983 aa21.72■■□□□ 1.07
ITGB1-207ENST00000439974 COL5A3P25940 1745 aaPredicted RBP21.7■■□□□ 1.06
ITGB1-207ENST00000439974 DDX10Q13206 875 aaKnown RBP21.7■■□□□ 1.06
ITGB1-207ENST00000439974 RTCBQ9Y3I0 505 aaKnown RBP21.7■■□□□ 1.06
ITGB1-207ENST00000439974 RC3H1Q5TC82 1133 aaKnown RBP21.69■■□□□ 1.06
ITGB1-207ENST00000439974 CNTNAP4Q9C0A0 1308 aa21.69■■□□□ 1.06
ITGB1-207ENST00000439974 TRAPPC3LQ5T215 181 aa21.68■■□□□ 1.06
ITGB1-207ENST00000439974 SCN11AQ9UI33 1791 aa21.68■■□□□ 1.06
ITGB1-207ENST00000439974 AKAP4Q5JQC9 854 aa21.67■■□□□ 1.06
ITGB1-207ENST00000439974 NFATC2IPQ8NCF5 419 aa21.67■■□□□ 1.06
ITGB1-207ENST00000439974 ADRA2BP18089 450 aa21.66■■□□□ 1.06
ITGB1-207ENST00000439974 NPC1L1Q9UHC9 1359 aa21.65■■□□□ 1.06
ITGB1-207ENST00000439974 PTCD1O75127 700 aaKnown RBP21.65■■□□□ 1.06
ITGB1-207ENST00000439974 DIAPH1O60610 1272 aaKnown RBP21.64■■□□□ 1.05
ITGB1-207ENST00000439974 RPS6KA4O75676 772 aa21.64■■□□□ 1.05
ITGB1-207ENST00000439974 MMP10P09238 476 aa21.64■■□□□ 1.05
ITGB1-207ENST00000439974 HMOX1P09601 288 aa21.64■■□□□ 1.05
ITGB1-207ENST00000439974 ARHGEF1Q92888 912 aaKnown RBP21.64■■□□□ 1.05
ITGB1-207ENST00000439974 MYH14Q7Z406 1995 aaKnown RBP21.64■■□□□ 1.05
ITGB1-207ENST00000439974 NLGN1Q8N2Q7 840 aa21.63■■□□□ 1.05
ITGB1-207ENST00000439974 RFC4P35249 363 aa21.62■■□□□ 1.05
ITGB1-207ENST00000439974 CICQ96RK0 1608 aaPredicted RBP21.62■■□□□ 1.05
ITGB1-207ENST00000439974 SLC52A2Q9HAB3 445 aa21.61■■□□□ 1.05
ITGB1-207ENST00000439974 TJP1Q07157 1748 aa21.6■■□□□ 1.05
ITGB1-207ENST00000439974 MRC1P22897 1456 aa21.6■■□□□ 1.05
ITGB1-207ENST00000439974 CRKLP46109 303 aaKnown RBP21.6■■□□□ 1.05
ITGB1-207ENST00000439974 C4AP0C0L4 1744 aa21.6■■□□□ 1.05
ITGB1-207ENST00000439974 VIRMAQ69YN4 1812 aaKnown RBP21.59■■□□□ 1.05
ITGB1-207ENST00000439974 KIF13BQ9NQT8 1826 aa21.59■■□□□ 1.05
ITGB1-207ENST00000439974 RNMTO43148 476 aaKnown RBP21.59■■□□□ 1.05
ITGB1-207ENST00000439974 GYS1P13807 737 aa21.59■■□□□ 1.05
ITGB1-207ENST00000439974 MTHFSDQ2M296 383 aaKnown RBP21.59■■□□□ 1.05
ITGB1-207ENST00000439974 LGR6Q9HBX8 967 aa21.59■■□□□ 1.05
ITGB1-207ENST00000439974 COL3A1P02461 1466 aaPredicted RBP21.58■■□□□ 1.05
ITGB1-207ENST00000439974 WWC3Q9ULE0 1092 aa21.57■■□□□ 1.04
ITGB1-207ENST00000439974 ADAMTS7Q9UKP4 1686 aa21.56■■□□□ 1.04
ITGB1-207ENST00000439974 GIGYF1O75420 1035 aaPredicted RBP21.56■■□□□ 1.04
ITGB1-207ENST00000439974 C1QTNF8P60827 252 aa21.56■■□□□ 1.04
ITGB1-207ENST00000439974 C10orf71Q711Q0 1435 aa21.55■■□□□ 1.04
ITGB1-207ENST00000439974 PPP2R1AP30153 589 aa21.55■■□□□ 1.04
ITGB1-207ENST00000439974 CCDC87Q9NVE4 849 aa21.55■■□□□ 1.04
ITGB1-207ENST00000439974 PXDNLA1KZ92 1463 aa21.55■■□□□ 1.04
ITGB1-207ENST00000439974 ZNF316A6NFI3 1004 aaPredicted RBP21.54■■□□□ 1.04
ITGB1-207ENST00000439974 U2SURPO15042 1029 aaKnown RBP21.54■■□□□ 1.04
ITGB1-207ENST00000439974 TGFB2P61812 414 aa21.54■■□□□ 1.04
ITGB1-207ENST00000439974 DNAJC10Q8IXB1 793 aa21.54■■□□□ 1.04
ITGB1-207ENST00000439974 PARP3Q9Y6F1 533 aa21.54■■□□□ 1.04
ITGB1-207ENST00000439974 KIAA1551Q9HCM1 1747 aa21.54■■□□□ 1.04
ITGB1-207ENST00000439974 ATP10DQ9P241 1426 aa21.54■■□□□ 1.04
ITGB1-207ENST00000439974 USP42Q9H9J4 1324 aaKnown RBP21.54■■□□□ 1.04
ITGB1-207ENST00000439974 SLC39A6Q13433 755 aa21.53■■□□□ 1.04
ITGB1-207ENST00000439974 INTS5Q6P9B9 1019 aaKnown RBP21.53■■□□□ 1.04
ITGB1-207ENST00000439974 N4BP2Q86UW6 1770 aaPredicted RBP21.52■■□□□ 1.04
ITGB1-207ENST00000439974 KCPQ6ZWJ8 1503 aa21.52■■□□□ 1.04
ITGB1-207ENST00000439974 SRP68Q9UHB9 627 aaKnown RBP21.52■■□□□ 1.04
ITGB1-207ENST00000439974 ADCY9O60503 1353 aa21.51■■□□□ 1.03
ITGB1-207ENST00000439974 GAS2L2Q8NHY3 880 aa21.51■■□□□ 1.03
ITGB1-207ENST00000439974 CYP19A1P11511 503 aaPredicted RBP21.5■■□□□ 1.03
ITGB1-207ENST00000439974 A0A0G2JLW4 131 aa21.49■■□□□ 1.03
ITGB1-207ENST00000439974 FKBP8Q14318 412 aa21.49■■□□□ 1.03
ITGB1-207ENST00000439974 VSIG10Q8N0Z9 540 aa21.49■■□□□ 1.03
ITGB1-207ENST00000439974 CFAP53Q96M91 514 aa21.49■■□□□ 1.03
ITGB1-207ENST00000439974 SOS1Q07889 1333 aaPredicted RBP21.49■■□□□ 1.03
ITGB1-207ENST00000439974 UBR2Q8IWV8 1755 aa21.48■■□□□ 1.03
ITGB1-207ENST00000439974 SENP3-EIF4A1A0A087X0R7 540 aa21.48■■□□□ 1.03
ITGB1-207ENST00000439974 GNAT3A8MTJ3 354 aa21.47■■□□□ 1.03
ITGB1-207ENST00000439974 ZPR1O75312 459 aa21.47■■□□□ 1.03
ITGB1-207ENST00000439974 DPEP1P16444 411 aa21.47■■□□□ 1.03
ITGB1-207ENST00000439974 GPBP1L1Q9HC44 474 aaPredicted RBP21.47■■□□□ 1.03
ITGB1-207ENST00000439974 BCS1LQ9Y276 419 aa21.47■■□□□ 1.03
ITGB1-207ENST00000439974 BRCA1P38398 1863 aaKnown RBP21.46■■□□□ 1.03
ITGB1-207ENST00000439974 DDR1Q08345 913 aa21.46■■□□□ 1.03
ITGB1-207ENST00000439974 TEFQ10587 303 aa21.46■■□□□ 1.03
ITGB1-207ENST00000439974 TTC5Q8N0Z6 440 aa21.46■■□□□ 1.03
ITGB1-207ENST00000439974 USPL1Q5W0Q7 1092 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms