RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 RXRBP28702 533 aa10.26□□□□□ -0.77
COPS3-203ENST00000439936 TRPC5Q9UL62 973 aaPredicted RBP10.26□□□□□ -0.77
COPS3-203ENST00000439936 SLIT3O75094 1523 aa10.25□□□□□ -0.77
COPS3-203ENST00000439936 PER1O15534 1290 aaPredicted RBP10.25□□□□□ -0.77
COPS3-203ENST00000439936 EVA1CP58658 441 aa10.25□□□□□ -0.77
COPS3-203ENST00000439936 RBM6P78332 1123 aaKnown RBP10.25□□□□□ -0.77
COPS3-203ENST00000439936 PPP4R3BQ5MIZ7 849 aa10.25□□□□□ -0.77
COPS3-203ENST00000439936 LARP6Q9BRS8 491 aaKnown RBP10.25□□□□□ -0.77
COPS3-203ENST00000439936 NSD3Q9BZ95 1437 aa10.25□□□□□ -0.77
COPS3-203ENST00000439936 COL14A1Q05707 1796 aaKnown RBP10.24□□□□□ -0.77
COPS3-203ENST00000439936 CGNL1Q0VF96 1302 aa10.24□□□□□ -0.77
COPS3-203ENST00000439936 MFSD10Q14728 455 aa10.24□□□□□ -0.77
COPS3-203ENST00000439936 VPS72Q15906 364 aa10.24□□□□□ -0.77
COPS3-203ENST00000439936 GJD4Q96KN9 370 aaPredicted RBP10.24□□□□□ -0.77
COPS3-203ENST00000439936 KNSTRNQ9Y448 316 aa10.24□□□□□ -0.77
COPS3-203ENST00000439936 USP54Q70EL1 1684 aa10.23□□□□□ -0.77
COPS3-203ENST00000439936 AATKQ6ZMQ8 1374 aa10.23□□□□□ -0.77
COPS3-203ENST00000439936 COL18A1P39060 1754 aa10.23□□□□□ -0.77
COPS3-203ENST00000439936 RGPD5Q99666 1765 aa10.23□□□□□ -0.77
COPS3-203ENST00000439936 OVOS2A0A0J9YW53 1432 aa10.23□□□□□ -0.77
COPS3-203ENST00000439936 ATRNO75882 1429 aa10.23□□□□□ -0.77
COPS3-203ENST00000439936 OVOS2Q6IE36 1432 aa10.23□□□□□ -0.77
COPS3-203ENST00000439936 STRN4Q9NRL3 753 aa10.23□□□□□ -0.77
COPS3-203ENST00000439936 DAXXQ9UER7 740 aaPredicted RBP10.23□□□□□ -0.77
COPS3-203ENST00000439936 CCDC9Q9Y3X0 531 aaKnown RBP10.23□□□□□ -0.77
COPS3-203ENST00000439936 PLCH1Q4KWH8 1693 aa10.23□□□□□ -0.77
COPS3-203ENST00000439936 CAMTA1Q9Y6Y1 1673 aa10.23□□□□□ -0.77
COPS3-203ENST00000439936 NWD2Q9ULI1 1742 aa10.23□□□□□ -0.77
COPS3-203ENST00000439936 WDR70Q9NW82 654 aa10.22□□□□□ -0.77
COPS3-203ENST00000439936 NFAT5O94916 1531 aa10.22□□□□□ -0.77
COPS3-203ENST00000439936 KIF20BQ96Q89 1820 aa10.22□□□□□ -0.77
COPS3-203ENST00000439936 MAP2P11137 1827 aaKnown RBP10.21□□□□□ -0.78
COPS3-203ENST00000439936 RRS1Q15050 365 aaKnown RBP10.21□□□□□ -0.78
COPS3-203ENST00000439936 LARP1Q6PKG0 1096 aaKnown RBP10.21□□□□□ -0.78
COPS3-203ENST00000439936 IP6K1Q92551 441 aa10.21□□□□□ -0.78
COPS3-203ENST00000439936 MAP3K19Q56UN5 1328 aa10.21□□□□□ -0.78
COPS3-203ENST00000439936 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.21□□□□□ -0.78
COPS3-203ENST00000439936 ONECUT3O60422 494 aaPredicted RBP10.2□□□□□ -0.78
COPS3-203ENST00000439936 AMPHP49418 695 aa10.2□□□□□ -0.78
COPS3-203ENST00000439936 LMO7Q8WWI1 1683 aa10.2□□□□□ -0.78
COPS3-203ENST00000439936 SPATA31A5Q5VU36 1347 aa10.2□□□□□ -0.78
COPS3-203ENST00000439936 SPATA31A7Q8IWB4 1347 aa10.2□□□□□ -0.78
COPS3-203ENST00000439936 LTN1O94822 1766 aa10.2□□□□□ -0.78
COPS3-203ENST00000439936 NRAPQ86VF7 1730 aa10.19□□□□□ -0.78
COPS3-203ENST00000439936 RGS20O76081 388 aa10.19□□□□□ -0.78
COPS3-203ENST00000439936 TNNT2P45379 298 aaPredicted RBP10.19□□□□□ -0.78
COPS3-203ENST00000439936 PSEN2P49810 448 aa10.19□□□□□ -0.78
COPS3-203ENST00000439936 DMRTA1Q5VZB9 504 aa10.19□□□□□ -0.78
COPS3-203ENST00000439936 MORC1Q86VD1 984 aa10.19□□□□□ -0.78
COPS3-203ENST00000439936 HOXC9P31274 260 aa10.18□□□□□ -0.78
COPS3-203ENST00000439936 DDX10Q13206 875 aaKnown RBP10.18□□□□□ -0.78
COPS3-203ENST00000439936 CNGB1Q14028 1251 aaPredicted RBP10.18□□□□□ -0.78
COPS3-203ENST00000439936 CC2D1BQ5T0F9 858 aaKnown RBP10.18□□□□□ -0.78
COPS3-203ENST00000439936 DDX27Q96GQ7 796 aaKnown RBP10.18□□□□□ -0.78
COPS3-203ENST00000439936 EMILIN3Q9NT22 766 aa10.18□□□□□ -0.78
COPS3-203ENST00000439936 USP35Q9P2H5 1018 aa10.18□□□□□ -0.78
COPS3-203ENST00000439936 POLKQ9UBT6 870 aa10.18□□□□□ -0.78
COPS3-203ENST00000439936 EMILIN1Q9Y6C2 1016 aa10.18□□□□□ -0.78
COPS3-203ENST00000439936 SPATA31A1Q5TZJ5 1347 aa10.18□□□□□ -0.78
COPS3-203ENST00000439936 CSB-PGBD3P0DP91 1061 aa10.17□□□□□ -0.78
COPS3-203ENST00000439936 FAM98CQ17RN3 349 aaKnown RBP10.17□□□□□ -0.78
COPS3-203ENST00000439936 TOM1L2Q6ZVM7 507 aa10.17□□□□□ -0.78
COPS3-203ENST00000439936 LTV1Q96GA3 475 aaPredicted RBP10.17□□□□□ -0.78
COPS3-203ENST00000439936 WDR17Q8IZU2 1322 aa10.17□□□□□ -0.78
COPS3-203ENST00000439936 GLI3P10071 1580 aa10.17□□□□□ -0.78
COPS3-203ENST00000439936 ANKRD26Q9UPS8 1709 aa10.16□□□□□ -0.78
COPS3-203ENST00000439936 COL5A2P05997 1499 aaPredicted RBP10.16□□□□□ -0.78
COPS3-203ENST00000439936 NSD2O96028 1365 aa10.16□□□□□ -0.78
COPS3-203ENST00000439936 PPM1GO15355 546 aaPredicted RBP10.16□□□□□ -0.78
COPS3-203ENST00000439936 HSP90AB2PQ58FF8 381 aa10.16□□□□□ -0.78
COPS3-203ENST00000439936 SEPT12Q8IYM1 358 aa10.16□□□□□ -0.78
COPS3-203ENST00000439936 ANKRD24Q8TF21 1146 aa10.16□□□□□ -0.78
COPS3-203ENST00000439936 KCTD12Q96CX2 325 aaKnown RBP10.16□□□□□ -0.78
COPS3-203ENST00000439936 CDK12Q9NYV4 1490 aaPredicted RBP10.16□□□□□ -0.78
COPS3-203ENST00000439936 TCP11L2Q8N4U5 519 aa10.15□□□□□ -0.78
COPS3-203ENST00000439936 CARD10Q9BWT7 1032 aa10.15□□□□□ -0.78
COPS3-203ENST00000439936 NLRP2Q9NX02 1062 aa10.15□□□□□ -0.78
COPS3-203ENST00000439936 THRAP3Q9Y2W1 955 aaKnown RBP10.15□□□□□ -0.78
COPS3-203ENST00000439936 CRB1P82279 1406 aa10.15□□□□□ -0.79
COPS3-203ENST00000439936 NPC1L1Q9UHC9 1359 aa10.15□□□□□ -0.79
COPS3-203ENST00000439936 E2F4Q16254 413 aa10.14□□□□□ -0.79
COPS3-203ENST00000439936 IFFO2Q5TF58 517 aa10.14□□□□□ -0.79
COPS3-203ENST00000439936 BARGINQ6ZT62 677 aa10.14□□□□□ -0.79
COPS3-203ENST00000439936 KCNV2Q8TDN2 545 aa10.14□□□□□ -0.79
COPS3-203ENST00000439936 ANO8Q9HCE9 1232 aaPredicted RBP10.14□□□□□ -0.79
COPS3-203ENST00000439936 RGS12O14924 1447 aa10.14□□□□□ -0.79
COPS3-203ENST00000439936 BRWD3Q6RI45 1802 aa10.14□□□□□ -0.79
COPS3-203ENST00000439936 A0A0G2JS52 829 aa10.14□□□□□ -0.79
COPS3-203ENST00000439936 CAMK2BQ13554 666 aa10.14□□□□□ -0.79
COPS3-203ENST00000439936 ABCC6O95255 1503 aa10.13□□□□□ -0.79
COPS3-203ENST00000439936 RGPD2P0DJD1 1756 aa10.13□□□□□ -0.79
COPS3-203ENST00000439936 BLMP54132 1417 aaPredicted RBP10.13□□□□□ -0.79
COPS3-203ENST00000439936 PEAK1Q9H792 1746 aa10.13□□□□□ -0.79
COPS3-203ENST00000439936 INSRP06213 1382 aa10.13□□□□□ -0.79
COPS3-203ENST00000439936 KIF24Q5T7B8 1368 aa10.13□□□□□ -0.79
COPS3-203ENST00000439936 MTHFSP49914 203 aa10.13□□□□□ -0.79
COPS3-203ENST00000439936 NBPF6Q5VWK0 638 aa10.13□□□□□ -0.79
COPS3-203ENST00000439936 NBPF4Q96M43 638 aa10.13□□□□□ -0.79
COPS3-203ENST00000439936 FLT4P35916 1363 aa10.12□□□□□ -0.79
COPS3-203ENST00000439936 SOCS7O14512 581 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms