RNA–Protein interactions for RNA: ENST00000439830.5

ANKRD28-203, Transcript of ankyrin repeat domain 28, humanhuman

TSL 5

Gene ANKRD28, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-203ENST00000439830 LINC00116Q8NCU8 138 aa34.33■■■■□ 3.09
ANKRD28-203ENST00000439830 ATG3Q9NT62 314 aa34.33■■■■□ 3.09
ANKRD28-203ENST00000439830 GOLGB1Q14789 3259 aaKnown RBP34.33■■■■□ 3.09
ANKRD28-203ENST00000439830 IL13P35225 146 aa34.32■■■■□ 3.08
ANKRD28-203ENST00000439830 SULT6B1Q6IMI4 303 aa34.32■■■■□ 3.08
ANKRD28-203ENST00000439830 ATP6V1AP38606 617 aa34.31■■■■□ 3.08
ANKRD28-203ENST00000439830 PHF14O94880 888 aa34.3■■■■□ 3.08
ANKRD28-203ENST00000439830 GPR162Q16538 588 aa34.3■■■■□ 3.08
ANKRD28-203ENST00000439830 AMIGO3Q86WK7 504 aa34.3■■■■□ 3.08
ANKRD28-203ENST00000439830 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP34.29■■■■□ 3.08
ANKRD28-203ENST00000439830 SSFA2P28290 1259 aa34.29■■■■□ 3.08
ANKRD28-203ENST00000439830 ITPK1Q13572 414 aa34.29■■■■□ 3.08
ANKRD28-203ENST00000439830 C1orf141Q5JVX7 400 aa34.29■■■■□ 3.08
ANKRD28-203ENST00000439830 NLGN2Q8NFZ4 835 aa34.29■■■■□ 3.08
ANKRD28-203ENST00000439830 PER1O15534 1290 aaPredicted RBP34.28■■■■□ 3.08
ANKRD28-203ENST00000439830 MTHFSP49914 203 aa34.26■■■■□ 3.08
ANKRD28-203ENST00000439830 GNPATO15228 680 aa34.25■■■■□ 3.07
ANKRD28-203ENST00000439830 CABP4P57796 275 aa34.25■■■■□ 3.07
ANKRD28-203ENST00000439830 CC2D1BQ5T0F9 858 aaKnown RBP34.25■■■■□ 3.07
ANKRD28-203ENST00000439830 PELP1Q8IZL8 1130 aaKnown RBP34.24■■■■□ 3.07
ANKRD28-203ENST00000439830 SMIM5Q71RC9 77 aa34.23■■■■□ 3.07
ANKRD28-203ENST00000439830 MYH14Q7Z406 1995 aaKnown RBP34.22■■■■□ 3.07
ANKRD28-203ENST00000439830 RBM42Q9BTD8 480 aaKnown RBP34.21■■■■□ 3.07
ANKRD28-203ENST00000439830 NPC1L1Q9UHC9 1359 aa34.21■■■■□ 3.07
ANKRD28-203ENST00000439830 CICQ96RK0 1608 aaPredicted RBP34.2■■■■□ 3.07
ANKRD28-203ENST00000439830 C4AP0C0L4 1744 aa34.18■■■■□ 3.06
ANKRD28-203ENST00000439830 SLC4A9Q96Q91 983 aa34.18■■■■□ 3.06
ANKRD28-203ENST00000439830 CD2APQ9Y5K6 639 aa34.18■■■■□ 3.06
ANKRD28-203ENST00000439830 TJP1Q07157 1748 aa34.18■■■■□ 3.06
ANKRD28-203ENST00000439830 ZNF784Q8NCA9 323 aaPredicted RBP34.16■■■■□ 3.06
ANKRD28-203ENST00000439830 CNTNAP4Q9C0A0 1308 aa34.14■■■■□ 3.06
ANKRD28-203ENST00000439830 DIAPH1O60610 1272 aaKnown RBP34.14■■■■□ 3.06
ANKRD28-203ENST00000439830 HMOX1P09601 288 aa34.14■■■■□ 3.06
ANKRD28-203ENST00000439830 AKAP4Q5JQC9 854 aa34.14■■■■□ 3.06
ANKRD28-203ENST00000439830 NFATC2IPQ8NCF5 419 aa34.14■■■■□ 3.06
ANKRD28-203ENST00000439830 RTCBQ9Y3I0 505 aaKnown RBP34.14■■■■□ 3.06
ANKRD28-203ENST00000439830 COL3A1P02461 1466 aaPredicted RBP34.14■■■■□ 3.06
ANKRD28-203ENST00000439830 ADAMTS7Q9UKP4 1686 aa34.13■■■■□ 3.05
ANKRD28-203ENST00000439830 MRC1P22897 1456 aa34.13■■■■□ 3.05
ANKRD28-203ENST00000439830 KIF13BQ9NQT8 1826 aa34.11■■■■□ 3.05
ANKRD28-203ENST00000439830 YBX3P16989 372 aaKnown RBP eCLIP34.11■■■■□ 3.05
ANKRD28-203ENST00000439830 RC3H1Q5TC82 1133 aaKnown RBP34.11■■■■□ 3.05
ANKRD28-203ENST00000439830 GRIN3BO60391 1043 aa34.09■■■■□ 3.05
ANKRD28-203ENST00000439830 PTCD1O75127 700 aaKnown RBP34.09■■■■□ 3.05
ANKRD28-203ENST00000439830 ADRA2BP18089 450 aa34.09■■■■□ 3.05
ANKRD28-203ENST00000439830 CNGB1Q14028 1251 aaPredicted RBP34.09■■■■□ 3.05
ANKRD28-203ENST00000439830 TRAPPC3LQ5T215 181 aa34.09■■■■□ 3.05
ANKRD28-203ENST00000439830 SLC52A2Q9HAB3 445 aa34.05■■■■□ 3.04
ANKRD28-203ENST00000439830 RPS6KA4O75676 772 aa34.04■■■■□ 3.04
ANKRD28-203ENST00000439830 MMP10P09238 476 aa34.03■■■■□ 3.04
ANKRD28-203ENST00000439830 UBR2Q8IWV8 1755 aa34.03■■■■□ 3.04
ANKRD28-203ENST00000439830 KIAA1551Q9HCM1 1747 aa34.02■■■■□ 3.04
ANKRD28-203ENST00000439830 RNMTO43148 476 aaKnown RBP34.02■■■■□ 3.04
ANKRD28-203ENST00000439830 MTHFSDQ2M296 383 aaKnown RBP34.02■■■■□ 3.04
ANKRD28-203ENST00000439830 ARHGEF1Q92888 912 aaKnown RBP34.02■■■■□ 3.04
ANKRD28-203ENST00000439830 LGR6Q9HBX8 967 aa34.02■■■■□ 3.04
ANKRD28-203ENST00000439830 RFC4P35249 363 aa34.01■■■■□ 3.03
ANKRD28-203ENST00000439830 N4BP2Q86UW6 1770 aaPredicted RBP34■■■■□ 3.03
ANKRD28-203ENST00000439830 CRKLP46109 303 aaKnown RBP34■■■■□ 3.03
ANKRD28-203ENST00000439830 NLGN1Q8N2Q7 840 aa34■■■■□ 3.03
ANKRD28-203ENST00000439830 U2SURPO15042 1029 aaKnown RBP33.99■■■■□ 3.03
ANKRD28-203ENST00000439830 KCPQ6ZWJ8 1503 aa33.99■■■■□ 3.03
ANKRD28-203ENST00000439830 SIPA1L3O60292 1781 aaPredicted RBP33.98■■■■□ 3.03
ANKRD28-203ENST00000439830 GYS1P13807 737 aa33.96■■■■□ 3.03
ANKRD28-203ENST00000439830 BRCA1P38398 1863 aaKnown RBP33.94■■■■□ 3.02
ANKRD28-203ENST00000439830 C10orf71Q711Q0 1435 aa33.94■■■■□ 3.02
ANKRD28-203ENST00000439830 CFAP53Q96M91 514 aa33.93■■■■□ 3.02
ANKRD28-203ENST00000439830 PXDNLA1KZ92 1463 aa33.93■■■■□ 3.02
ANKRD28-203ENST00000439830 SLC39A6Q13433 755 aa33.92■■■■□ 3.02
ANKRD28-203ENST00000439830 DNAJC10Q8IXB1 793 aa33.91■■■■□ 3.02
ANKRD28-203ENST00000439830 GAS2L2Q8NHY3 880 aa33.91■■■■□ 3.02
ANKRD28-203ENST00000439830 WWC3Q9ULE0 1092 aa33.91■■■■□ 3.02
ANKRD28-203ENST00000439830 USP42Q9H9J4 1324 aaKnown RBP33.9■■■■□ 3.02
ANKRD28-203ENST00000439830 INTS5Q6P9B9 1019 aaKnown RBP33.89■■■■□ 3.02
ANKRD28-203ENST00000439830 CCDC87Q9NVE4 849 aa33.89■■■■□ 3.02
ANKRD28-203ENST00000439830 PARP3Q9Y6F1 533 aa33.88■■■■□ 3.01
ANKRD28-203ENST00000439830 SRP68Q9UHB9 627 aaKnown RBP33.86■■■■□ 3.01
ANKRD28-203ENST00000439830 GNAT3A8MTJ3 354 aa33.85■■■■□ 3.01
ANKRD28-203ENST00000439830 TGFB2P61812 414 aa33.85■■■■□ 3.01
ANKRD28-203ENST00000439830 CYP19A1P11511 503 aaPredicted RBP33.84■■■■□ 3.01
ANKRD28-203ENST00000439830 VSIG10Q8N0Z9 540 aa33.84■■■■□ 3.01
ANKRD28-203ENST00000439830 SOS1Q07889 1333 aaPredicted RBP33.83■■■■□ 3.01
ANKRD28-203ENST00000439830 TTC5Q8N0Z6 440 aa33.83■■■■□ 3.01
ANKRD28-203ENST00000439830 ARFGEF1Q9Y6D6 1849 aa33.83■■■■□ 3.01
ANKRD28-203ENST00000439830 ATP10DQ9P241 1426 aa33.82■■■■□ 3
ANKRD28-203ENST00000439830 AFDNP55196 1824 aaKnown RBP33.82■■■■□ 3
ANKRD28-203ENST00000439830 PPP2R1AP30153 589 aa33.82■■■■□ 3
ANKRD28-203ENST00000439830 TEFQ10587 303 aa33.82■■■■□ 3
ANKRD28-203ENST00000439830 FKBP8Q14318 412 aa33.82■■■■□ 3
ANKRD28-203ENST00000439830 NUDCQ9Y266 331 aa33.82■■■■□ 3
ANKRD28-203ENST00000439830 PRKAR2BP31323 418 aa33.81■■■■□ 3
ANKRD28-203ENST00000439830 RSPH6AQ9H0K4 717 aa33.81■■■■□ 3
ANKRD28-203ENST00000439830 GIGYF1O75420 1035 aaPredicted RBP33.8■■■■□ 3
ANKRD28-203ENST00000439830 IL17REQ8NFR9 667 aa33.8■■■■□ 3
ANKRD28-203ENST00000439830 ADCY9O60503 1353 aa33.8■■■■□ 3
ANKRD28-203ENST00000439830 COL15A1P39059 1388 aa33.8■■■■□ 3
ANKRD28-203ENST00000439830 ZPR1O75312 459 aa33.79■■■■□ 3
ANKRD28-203ENST00000439830 ZBTB1Q9Y2K1 713 aa33.78■■■■□ 3
ANKRD28-203ENST00000439830 A0A0G2JLW4 131 aa33.77■■■■□ 3
ANKRD28-203ENST00000439830 C1QTNF8P60827 252 aa33.77■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms