RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 MAP2K1Q02750 393 aaPredicted RBP7.53□□□□□ -1.2
BDNF-211ENST00000439476 RALYLQ86SE5 291 aaKnown RBP7.53□□□□□ -1.2
BDNF-211ENST00000439476 RUFY1Q96T51 708 aa7.53□□□□□ -1.2
BDNF-211ENST00000439476 SRCIN1Q9C0H9 1055 aa7.53□□□□□ -1.2
BDNF-211ENST00000439476 MRVI1Q9Y6F6 885 aa7.53□□□□□ -1.2
BDNF-211ENST00000439476 CCT4P50991 539 aaKnown RBP7.52□□□□□ -1.21
BDNF-211ENST00000439476 CLASRPQ8N2M8 674 aaKnown RBP7.52□□□□□ -1.21
BDNF-211ENST00000439476 TXLNBQ8N3L3 684 aa7.52□□□□□ -1.21
BDNF-211ENST00000439476 UPF3BQ9BZI7 483 aaKnown RBP7.52□□□□□ -1.21
BDNF-211ENST00000439476 TRIM5Q9C035 493 aa7.52□□□□□ -1.21
BDNF-211ENST00000439476 ZBTB40Q9NUA8 1239 aa7.52□□□□□ -1.21
BDNF-211ENST00000439476 TTC36A6NLP5 189 aa7.52□□□□□ -1.21
BDNF-211ENST00000439476 DCTN1Q14203 1278 aa7.52□□□□□ -1.21
BDNF-211ENST00000439476 JMYQ8N9B5 988 aa7.52□□□□□ -1.21
BDNF-211ENST00000439476 CALR3Q96L12 384 aaKnown RBP7.52□□□□□ -1.21
BDNF-211ENST00000439476 ZNF521Q96K83 1311 aa7.52□□□□□ -1.21
BDNF-211ENST00000439476 MCM5P33992 734 aa7.52□□□□□ -1.21
BDNF-211ENST00000439476 CCDC30Q5VVM6 783 aa7.52□□□□□ -1.21
BDNF-211ENST00000439476 TRMT2AQ8IZ69 625 aaKnown RBP7.52□□□□□ -1.21
BDNF-211ENST00000439476 CCAR2Q8N163 923 aaKnown RBP7.52□□□□□ -1.21
BDNF-211ENST00000439476 RNF217Q8TC41 542 aa7.52□□□□□ -1.21
BDNF-211ENST00000439476 EXOC6BQ9Y2D4 811 aa7.52□□□□□ -1.21
BDNF-211ENST00000439476 NSD2O96028 1365 aa7.52□□□□□ -1.21
BDNF-211ENST00000439476 TDO2P48775 406 aa7.51□□□□□ -1.21
BDNF-211ENST00000439476 ZNF396Q96N95 335 aaPredicted RBP7.51□□□□□ -1.21
BDNF-211ENST00000439476 RDXP35241 583 aaKnown RBP7.51□□□□□ -1.21
BDNF-211ENST00000439476 CREBRFQ8IUR6 639 aa7.51□□□□□ -1.21
BDNF-211ENST00000439476 CEP120Q8N960 986 aa7.51□□□□□ -1.21
BDNF-211ENST00000439476 C14orf93Q9H972 538 aaKnown RBP7.51□□□□□ -1.21
BDNF-211ENST00000439476 CEP170Q5SW79 1584 aa7.51□□□□□ -1.21
BDNF-211ENST00000439476 NOS1P29475 1434 aa7.51□□□□□ -1.21
BDNF-211ENST00000439476 CCDC192P0DO97 292 aa7.51□□□□□ -1.21
BDNF-211ENST00000439476 TTC22Q5TAA0 569 aa7.51□□□□□ -1.21
BDNF-211ENST00000439476 CC2D2BQ6DHV5 1058 aa7.51□□□□□ -1.21
BDNF-211ENST00000439476 MYCBPQ99417 103 aaPredicted RBP7.51□□□□□ -1.21
BDNF-211ENST00000439476 OFD1O75665 1012 aa7.51□□□□□ -1.21
BDNF-211ENST00000439476 SART3Q15020 963 aaKnown RBP7.51□□□□□ -1.21
BDNF-211ENST00000439476 CHD1O14646 1710 aa7.51□□□□□ -1.21
BDNF-211ENST00000439476 BCORL1Q5H9F3 1711 aa7.51□□□□□ -1.21
BDNF-211ENST00000439476 DISP1Q96F81 1524 aa7.51□□□□□ -1.21
BDNF-211ENST00000439476 SYCP2Q9BX26 1530 aa7.51□□□□□ -1.21
BDNF-211ENST00000439476 RRS1Q15050 365 aaKnown RBP7.5□□□□□ -1.21
BDNF-211ENST00000439476 NBPF11Q86T75 865 aa7.5□□□□□ -1.21
BDNF-211ENST00000439476 TIGD1Q96MW7 591 aa7.5□□□□□ -1.21
BDNF-211ENST00000439476 MBD5Q9P267 1494 aa7.5□□□□□ -1.21
BDNF-211ENST00000439476 SATB1Q01826 763 aa7.5□□□□□ -1.21
BDNF-211ENST00000439476 LRSAM1Q6UWE0 723 aa7.5□□□□□ -1.21
BDNF-211ENST00000439476 FAM177A1Q8N128 213 aaPredicted RBP7.5□□□□□ -1.21
BDNF-211ENST00000439476 TMTC2Q8N394 836 aa7.5□□□□□ -1.21
BDNF-211ENST00000439476 ARHGAP45Q92619 1136 aa7.5□□□□□ -1.21
BDNF-211ENST00000439476 SMARCE1Q969G3 411 aa7.5□□□□□ -1.21
BDNF-211ENST00000439476 DUOX2Q9NRD8 1548 aa7.5□□□□□ -1.21
BDNF-211ENST00000439476 DYNC1I1O14576 645 aa7.5□□□□□ -1.21
BDNF-211ENST00000439476 KINO60870 393 aaKnown RBP7.5□□□□□ -1.21
BDNF-211ENST00000439476 PRIM1P49642 420 aaKnown RBP7.5□□□□□ -1.21
BDNF-211ENST00000439476 FILIP1LQ4L180 1135 aa7.5□□□□□ -1.21
BDNF-211ENST00000439476 PDCL2Q8N4E4 241 aa7.5□□□□□ -1.21
BDNF-211ENST00000439476 GDPD2Q9HCC8 539 aa7.5□□□□□ -1.21
BDNF-211ENST00000439476 USP25Q9UHP3 1055 aa7.5□□□□□ -1.21
BDNF-211ENST00000439476 CEP83Q9Y592 693 aa7.5□□□□□ -1.21
BDNF-211ENST00000439476 MAP4K4O95819 1239 aaPredicted RBP7.5□□□□□ -1.21
BDNF-211ENST00000439476 PCMTD1Q96MG8 357 aaPredicted RBP7.5□□□□□ -1.21
BDNF-211ENST00000439476 TMX1Q9H3N1 280 aa7.5□□□□□ -1.21
BDNF-211ENST00000439476 ANTXR1Q9H6X2 564 aa7.5□□□□□ -1.21
BDNF-211ENST00000439476 IL1RAPL2Q9NP60 686 aa7.5□□□□□ -1.21
BDNF-211ENST00000439476 DACH1Q9UI36 760 aa7.5□□□□□ -1.21
BDNF-211ENST00000439476 MAFGO15525 162 aa7.49□□□□□ -1.21
BDNF-211ENST00000439476 SDF4Q9BRK5 362 aa7.49□□□□□ -1.21
BDNF-211ENST00000439476 YY1AP1Q9H869 796 aa7.49□□□□□ -1.21
BDNF-211ENST00000439476 ZKSCAN5Q9Y2L8 839 aa7.49□□□□□ -1.21
BDNF-211ENST00000439476 FBXW7Q969H0 707 aa7.49□□□□□ -1.21
BDNF-211ENST00000439476 ZSCAN31Q96LW9 406 aaPredicted RBP7.49□□□□□ -1.21
BDNF-211ENST00000439476 LUC7LQ9NQ29 371 aaKnown RBP7.49□□□□□ -1.21
BDNF-211ENST00000439476 MAGI2Q86UL8 1455 aa7.49□□□□□ -1.21
BDNF-211ENST00000439476 FSD2A1L4K1 749 aa7.49□□□□□ -1.21
BDNF-211ENST00000439476 SDSP20132 328 aa7.49□□□□□ -1.21
BDNF-211ENST00000439476 MX1P20591 662 aa7.49□□□□□ -1.21
BDNF-211ENST00000439476 CALRP27797 417 aaKnown RBP7.49□□□□□ -1.21
BDNF-211ENST00000439476 CCDC183Q5T5S1 534 aa7.49□□□□□ -1.21
BDNF-211ENST00000439476 NFXL1Q6ZNB6 911 aa7.49□□□□□ -1.21
BDNF-211ENST00000439476 MBIPQ9NS73 344 aa7.49□□□□□ -1.21
BDNF-211ENST00000439476 CYP46A1Q9Y6A2 500 aa7.49□□□□□ -1.21
BDNF-211ENST00000439476 KIF2AO00139 706 aaPredicted RBP7.48□□□□□ -1.21
BDNF-211ENST00000439476 KRT85P78386 507 aa7.48□□□□□ -1.21
BDNF-211ENST00000439476 HS1BP3Q53T59 392 aa7.48□□□□□ -1.21
BDNF-211ENST00000439476 RAPGEF4Q8WZA2 1011 aa7.48□□□□□ -1.21
BDNF-211ENST00000439476 EMILIN1Q9Y6C2 1016 aa7.48□□□□□ -1.21
BDNF-211ENST00000439476 ADGBQ8N7X0 1667 aa7.48□□□□□ -1.21
BDNF-211ENST00000439476 FOSBP53539 338 aa7.48□□□□□ -1.21
BDNF-211ENST00000439476 LARP1BQ659C4 914 aaKnown RBP7.48□□□□□ -1.21
BDNF-211ENST00000439476 MCM10Q7L590 875 aa7.48□□□□□ -1.21
BDNF-211ENST00000439476 TMX3Q96JJ7 454 aa7.48□□□□□ -1.21
BDNF-211ENST00000439476 TSPYL1Q9H0U9 437 aa7.48□□□□□ -1.21
BDNF-211ENST00000439476 TNMDQ9H2S6 317 aa7.48□□□□□ -1.21
BDNF-211ENST00000439476 HMGB2P26583 209 aaKnown RBP7.48□□□□□ -1.21
BDNF-211ENST00000439476 TXLNAP40222 546 aa7.48□□□□□ -1.21
BDNF-211ENST00000439476 C16orf71Q8IYS4 520 aaPredicted RBP7.48□□□□□ -1.21
BDNF-211ENST00000439476 MRPL50Q8N5N7 158 aaKnown RBP7.48□□□□□ -1.21
BDNF-211ENST00000439476 CCDC112Q8NEF3 446 aa7.48□□□□□ -1.21
BDNF-211ENST00000439476 TCEAL9Q9UHQ7 104 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms