RNA–Protein interactions for RNA: ENST00000439009.1

LINC00578-201, long intergenic non-protein coding RNA 578, humanhuman

TSL 4 BASIC

Gene LINC00578, Length 542 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00578-201ENST00000439009 TOMM70O94826 608 aa10.99□□□□□ -0.65
LINC00578-201ENST00000439009 MAP2P11137 1827 aaKnown RBP10.99□□□□□ -0.65
LINC00578-201ENST00000439009 PKD1L3Q7Z443 1732 aa10.98□□□□□ -0.65
LINC00578-201ENST00000439009 UBR3Q6ZT12 1888 aa10.98□□□□□ -0.65
LINC00578-201ENST00000439009 ADRA2BP18089 450 aa10.98□□□□□ -0.65
LINC00578-201ENST00000439009 TRAPPC3LQ5T215 181 aa10.98□□□□□ -0.65
LINC00578-201ENST00000439009 SLC4A9Q96Q91 983 aa10.98□□□□□ -0.65
LINC00578-201ENST00000439009 POLKQ9UBT6 870 aa10.98□□□□□ -0.65
LINC00578-201ENST00000439009 KDRP35968 1356 aa10.98□□□□□ -0.65
LINC00578-201ENST00000439009 PXDNLA1KZ92 1463 aa10.98□□□□□ -0.65
LINC00578-201ENST00000439009 ERVV-2B6SEH9 535 aa10.97□□□□□ -0.65
LINC00578-201ENST00000439009 WWC3Q9ULE0 1092 aa10.97□□□□□ -0.65
LINC00578-201ENST00000439009 RTCBQ9Y3I0 505 aaKnown RBP10.97□□□□□ -0.65
LINC00578-201ENST00000439009 C10orf71Q711Q0 1435 aa10.97□□□□□ -0.65
LINC00578-201ENST00000439009 CNTNAP4Q9C0A0 1308 aa10.96□□□□□ -0.65
LINC00578-201ENST00000439009 A0A0G2JLW4 131 aa10.96□□□□□ -0.65
LINC00578-201ENST00000439009 RPS6KA4O75676 772 aa10.96□□□□□ -0.65
LINC00578-201ENST00000439009 GYS1P13807 737 aa10.96□□□□□ -0.65
LINC00578-201ENST00000439009 KCNA3P22001 575 aa10.96□□□□□ -0.65
LINC00578-201ENST00000439009 ARHGEF1Q92888 912 aaKnown RBP10.96□□□□□ -0.65
LINC00578-201ENST00000439009 ITGB4P16144 1822 aa10.95□□□□□ -0.66
LINC00578-201ENST00000439009 PPM1GO15355 546 aaPredicted RBP10.95□□□□□ -0.66
LINC00578-201ENST00000439009 DPEP1P16444 411 aa10.95□□□□□ -0.66
LINC00578-201ENST00000439009 DCAF5Q96JK2 942 aa10.95□□□□□ -0.66
LINC00578-201ENST00000439009 BCS1LQ9Y276 419 aa10.95□□□□□ -0.66
LINC00578-201ENST00000439009 HSP90AB1P08238 724 aaKnown RBP10.94□□□□□ -0.66
LINC00578-201ENST00000439009 EIF4A2Q14240 407 aaKnown RBP10.94□□□□□ -0.66
LINC00578-201ENST00000439009 ARHGAP27Q6ZUM4 889 aa10.94□□□□□ -0.66
LINC00578-201ENST00000439009 RBM46Q8TBY0 533 aaKnown RBP10.94□□□□□ -0.66
LINC00578-201ENST00000439009 CCDC87Q9NVE4 849 aa10.94□□□□□ -0.66
LINC00578-201ENST00000439009 RFC4P35249 363 aa10.93□□□□□ -0.66
LINC00578-201ENST00000439009 NMRK2Q9NPI5 230 aa10.93□□□□□ -0.66
LINC00578-201ENST00000439009 KIF13BQ9NQT8 1826 aa10.93□□□□□ -0.66
LINC00578-201ENST00000439009 ANKRD26Q9UPS8 1709 aa10.92□□□□□ -0.66
LINC00578-201ENST00000439009 FCHSD2O94868 740 aa10.92□□□□□ -0.66
LINC00578-201ENST00000439009 AMOTQ4VCS5 1084 aa10.92□□□□□ -0.66
LINC00578-201ENST00000439009 JMYQ8N9B5 988 aa10.92□□□□□ -0.66
LINC00578-201ENST00000439009 PARP3Q9Y6F1 533 aa10.92□□□□□ -0.66
LINC00578-201ENST00000439009 KIAA1551Q9HCM1 1747 aa10.92□□□□□ -0.66
LINC00578-201ENST00000439009 ZNF831Q5JPB2 1677 aa10.92□□□□□ -0.66
LINC00578-201ENST00000439009 KIF20BQ96Q89 1820 aa10.91□□□□□ -0.66
LINC00578-201ENST00000439009 FSTL1Q12841 308 aa10.91□□□□□ -0.66
LINC00578-201ENST00000439009 PLEKHO1Q53GL0 409 aaPredicted RBP10.91□□□□□ -0.66
LINC00578-201ENST00000439009 C9orf131Q5VYM1 1079 aa10.91□□□□□ -0.66
LINC00578-201ENST00000439009 RBM42Q9BTD8 480 aaKnown RBP10.91□□□□□ -0.66
LINC00578-201ENST00000439009 PIM2Q9P1W9 311 aa10.91□□□□□ -0.66
LINC00578-201ENST00000439009 TIMELESSQ9UNS1 1208 aa10.9□□□□□ -0.66
LINC00578-201ENST00000439009 TM4SF1P30408 202 aa10.89□□□□□ -0.67
LINC00578-201ENST00000439009 CRKLP46109 303 aaKnown RBP10.89□□□□□ -0.67
LINC00578-201ENST00000439009 CABP4P57796 275 aa10.89□□□□□ -0.67
LINC00578-201ENST00000439009 DALRD3Q5D0E6 543 aaKnown RBP10.89□□□□□ -0.67
LINC00578-201ENST00000439009 KLRG1Q96E93 195 aa10.89□□□□□ -0.67
LINC00578-201ENST00000439009 KDM6AO15550 1401 aaPredicted RBP10.89□□□□□ -0.67
LINC00578-201ENST00000439009 USP42Q9H9J4 1324 aaKnown RBP10.88□□□□□ -0.67
LINC00578-201ENST00000439009 C4AP0C0L4 1744 aa10.88□□□□□ -0.67
LINC00578-201ENST00000439009 DDR1Q08345 913 aa10.88□□□□□ -0.67
LINC00578-201ENST00000439009 FKBP8Q14318 412 aa10.88□□□□□ -0.67
LINC00578-201ENST00000439009 ZNF530Q6P9A1 599 aaPredicted RBP10.88□□□□□ -0.67
LINC00578-201ENST00000439009 INTS5Q6P9B9 1019 aaKnown RBP10.88□□□□□ -0.67
LINC00578-201ENST00000439009 KDM2BQ8NHM5 1336 aa10.87□□□□□ -0.67
LINC00578-201ENST00000439009 PTCD1O75127 700 aaKnown RBP10.87□□□□□ -0.67
LINC00578-201ENST00000439009 MTHFSP49914 203 aa10.87□□□□□ -0.67
LINC00578-201ENST00000439009 NFATC2IPQ8NCF5 419 aa10.87□□□□□ -0.67
LINC00578-201ENST00000439009 SRP68Q9UHB9 627 aaKnown RBP10.87□□□□□ -0.67
LINC00578-201ENST00000439009 ZC3H4Q9UPT8 1303 aaKnown RBP10.86□□□□□ -0.67
LINC00578-201ENST00000439009 POLRMTO00411 1230 aaKnown RBP10.86□□□□□ -0.67
LINC00578-201ENST00000439009 TNNT2P45379 298 aaPredicted RBP10.86□□□□□ -0.67
LINC00578-201ENST00000439009 C16orf71Q8IYS4 520 aaPredicted RBP10.86□□□□□ -0.67
LINC00578-201ENST00000439009 N4BP2Q86UW6 1770 aaPredicted RBP10.85□□□□□ -0.67
LINC00578-201ENST00000439009 CHRNA5P30532 468 aa10.85□□□□□ -0.67
LINC00578-201ENST00000439009 RRAGCQ9HB90 399 aa10.85□□□□□ -0.67
LINC00578-201ENST00000439009 RNF181Q9P0P0 153 aa10.85□□□□□ -0.67
LINC00578-201ENST00000439009 COL5A3P25940 1745 aaPredicted RBP10.84□□□□□ -0.67
LINC00578-201ENST00000439009 HTRA3P83110 453 aa10.84□□□□□ -0.67
LINC00578-201ENST00000439009 C1orf141Q5JVX7 400 aa10.84□□□□□ -0.67
LINC00578-201ENST00000439009 COL13A1Q5TAT6 717 aaPredicted RBP10.84□□□□□ -0.67
LINC00578-201ENST00000439009 AEBP1Q8IUX7 1158 aa10.84□□□□□ -0.67
LINC00578-201ENST00000439009 SMC1BQ8NDV3 1235 aa10.84□□□□□ -0.67
LINC00578-201ENST00000439009 KCPQ6ZWJ8 1503 aa10.84□□□□□ -0.67
LINC00578-201ENST00000439009 SOS1Q07889 1333 aaPredicted RBP10.84□□□□□ -0.67
LINC00578-201ENST00000439009 MYH14Q7Z406 1995 aaKnown RBP10.83□□□□□ -0.68
LINC00578-201ENST00000439009 BRCA1P38398 1863 aaKnown RBP10.83□□□□□ -0.68
LINC00578-201ENST00000439009 IL13P35225 146 aa10.83□□□□□ -0.68
LINC00578-201ENST00000439009 PANK3Q9H999 370 aa10.83□□□□□ -0.68
LINC00578-201ENST00000439009 ZPR1O75312 459 aa10.82□□□□□ -0.68
LINC00578-201ENST00000439009 CYP19A1P11511 503 aaPredicted RBP10.82□□□□□ -0.68
LINC00578-201ENST00000439009 NFIXQ14938 502 aa10.82□□□□□ -0.68
LINC00578-201ENST00000439009 AKAP4Q5JQC9 854 aa10.82□□□□□ -0.68
LINC00578-201ENST00000439009 USPL1Q5W0Q7 1092 aa10.82□□□□□ -0.68
LINC00578-201ENST00000439009 SULT6B1Q6IMI4 303 aa10.82□□□□□ -0.68
LINC00578-201ENST00000439009 DNAJC10Q8IXB1 793 aa10.82□□□□□ -0.68
LINC00578-201ENST00000439009 SLC52A2Q9HAB3 445 aa10.82□□□□□ -0.68
LINC00578-201ENST00000439009 NARFQ9UHQ1 456 aa10.82□□□□□ -0.68
LINC00578-201ENST00000439009 ARFGEF1Q9Y6D6 1849 aa10.81□□□□□ -0.68
LINC00578-201ENST00000439009 GLTPD2A6NH11 291 aa10.81□□□□□ -0.68
LINC00578-201ENST00000439009 VEGFAP15692 232 aaPredicted RBP10.81□□□□□ -0.68
LINC00578-201ENST00000439009 LMNB1P20700 586 aa10.81□□□□□ -0.68
LINC00578-201ENST00000439009 PRELPP51888 382 aa10.81□□□□□ -0.68
LINC00578-201ENST00000439009 VSIG10Q8N0Z9 540 aa10.81□□□□□ -0.68
LINC00578-201ENST00000439009 BCL2L12Q9HB09 334 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms