RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 TAF1LQ8IZX4 1826 aa33.05■■■□□ 2.88
RAPGEF1-206ENST00000438647 RSPH6AQ9H0K4 717 aa33.05■■■□□ 2.88
RAPGEF1-206ENST00000438647 ATF5Q9Y2D1 282 aaPredicted RBP33.05■■■□□ 2.88
RAPGEF1-206ENST00000438647 PRKAR2BP31323 418 aa33.04■■■□□ 2.88
RAPGEF1-206ENST00000438647 ATP6V1AP38606 617 aa33.04■■■□□ 2.88
RAPGEF1-206ENST00000438647 RNMTO43148 476 aaKnown RBP33.03■■■□□ 2.88
RAPGEF1-206ENST00000438647 FCHSD2O94868 740 aa33.03■■■□□ 2.88
RAPGEF1-206ENST00000438647 AK7Q96M32 723 aa33.03■■■□□ 2.88
RAPGEF1-206ENST00000438647 FLAD1Q8NFF5 587 aa33.02■■■□□ 2.88
RAPGEF1-206ENST00000438647 SLC52A2Q9HAB3 445 aa33.02■■■□□ 2.88
RAPGEF1-206ENST00000438647 LGR6Q9HBX8 967 aa33.02■■■□□ 2.88
RAPGEF1-206ENST00000438647 TUBGCP6Q96RT7 1819 aa33.02■■■□□ 2.88
RAPGEF1-206ENST00000438647 PTGER2P43116 358 aa33.01■■■□□ 2.87
RAPGEF1-206ENST00000438647 RBM42Q9BTD8 480 aaKnown RBP33.01■■■□□ 2.87
RAPGEF1-206ENST00000438647 C4BP0C0L5 1744 aa33.01■■■□□ 2.87
RAPGEF1-206ENST00000438647 MAP3K5Q99683 1374 aa33■■■□□ 2.87
RAPGEF1-206ENST00000438647 MRC1P22897 1456 aa32.99■■■□□ 2.87
RAPGEF1-206ENST00000438647 GNAT3A8MTJ3 354 aa32.99■■■□□ 2.87
RAPGEF1-206ENST00000438647 ITPK1Q13572 414 aa32.98■■■□□ 2.87
RAPGEF1-206ENST00000438647 LINC00116Q8NCU8 138 aa32.98■■■□□ 2.87
RAPGEF1-206ENST00000438647 MSH5O43196 834 aa32.97■■■□□ 2.87
RAPGEF1-206ENST00000438647 ZNF831Q5JPB2 1677 aa32.97■■■□□ 2.87
RAPGEF1-206ENST00000438647 ADAMTS7Q9UKP4 1686 aa32.97■■■□□ 2.87
RAPGEF1-206ENST00000438647 PHACTR3Q96KR7 559 aa32.96■■■□□ 2.87
RAPGEF1-206ENST00000438647 COL23A1Q86Y22 540 aaPredicted RBP32.95■■■□□ 2.87
RAPGEF1-206ENST00000438647 SGIP1Q9BQI5 828 aa32.95■■■□□ 2.87
RAPGEF1-206ENST00000438647 PTCD1O75127 700 aaKnown RBP32.94■■■□□ 2.86
RAPGEF1-206ENST00000438647 MYBBP1AQ9BQG0 1328 aaKnown RBP32.94■■■□□ 2.86
RAPGEF1-206ENST00000438647 NEFMP07197 916 aa32.93■■■□□ 2.86
RAPGEF1-206ENST00000438647 SLC4A9Q96Q91 983 aa32.93■■■□□ 2.86
RAPGEF1-206ENST00000438647 VIRMAQ69YN4 1812 aaKnown RBP32.93■■■□□ 2.86
RAPGEF1-206ENST00000438647 SSFA2P28290 1259 aa32.92■■■□□ 2.86
RAPGEF1-206ENST00000438647 POLD1P28340 1107 aa32.92■■■□□ 2.86
RAPGEF1-206ENST00000438647 TEFQ10587 303 aa32.91■■■□□ 2.86
RAPGEF1-206ENST00000438647 GNPATO15228 680 aa32.89■■■□□ 2.86
RAPGEF1-206ENST00000438647 IL17REQ8NFR9 667 aa32.89■■■□□ 2.86
RAPGEF1-206ENST00000438647 ARXQ96QS3 562 aa32.89■■■□□ 2.86
RAPGEF1-206ENST00000438647 PNNQ9H307 717 aaKnown RBP32.89■■■□□ 2.86
RAPGEF1-206ENST00000438647 UBR3Q6ZT12 1888 aa32.88■■■□□ 2.85
RAPGEF1-206ENST00000438647 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP32.88■■■□□ 2.85
RAPGEF1-206ENST00000438647 RC3H1Q5TC82 1133 aaKnown RBP32.88■■■□□ 2.85
RAPGEF1-206ENST00000438647 CNTNAP4Q9C0A0 1308 aa32.87■■■□□ 2.85
RAPGEF1-206ENST00000438647 PHF14O94880 888 aa32.87■■■□□ 2.85
RAPGEF1-206ENST00000438647 RTF1Q92541 710 aaKnown RBP32.87■■■□□ 2.85
RAPGEF1-206ENST00000438647 CEMIPQ8WUJ3 1361 aa32.85■■■□□ 2.85
RAPGEF1-206ENST00000438647 SLC39A6Q13433 755 aa32.85■■■□□ 2.85
RAPGEF1-206ENST00000438647 RTCBQ9Y3I0 505 aaKnown RBP32.85■■■□□ 2.85
RAPGEF1-206ENST00000438647 TTC5Q8N0Z6 440 aa32.84■■■□□ 2.85
RAPGEF1-206ENST00000438647 COL5A3P25940 1745 aaPredicted RBP32.84■■■□□ 2.85
RAPGEF1-206ENST00000438647 COL24A1Q17RW2 1714 aa32.84■■■□□ 2.85
RAPGEF1-206ENST00000438647 AMIGO3Q86WK7 504 aa32.83■■■□□ 2.85
RAPGEF1-206ENST00000438647 PRKRIP1Q9H875 184 aaPredicted RBP32.83■■■□□ 2.85
RAPGEF1-206ENST00000438647 CICQ96RK0 1608 aaPredicted RBP32.82■■■□□ 2.84
RAPGEF1-206ENST00000438647 HTATSF1O43719 755 aaKnown RBP32.82■■■□□ 2.84
RAPGEF1-206ENST00000438647 ZNF316A6NFI3 1004 aaPredicted RBP32.81■■■□□ 2.84
RAPGEF1-206ENST00000438647 FHDC1Q9C0D6 1143 aaPredicted RBP32.81■■■□□ 2.84
RAPGEF1-206ENST00000438647 ADRA2BP18089 450 aa32.8■■■□□ 2.84
RAPGEF1-206ENST00000438647 MAPK8IP3Q9UPT6 1336 aa32.79■■■□□ 2.84
RAPGEF1-206ENST00000438647 KCPQ6ZWJ8 1503 aa32.79■■■□□ 2.84
RAPGEF1-206ENST00000438647 TRAPPC3LQ5T215 181 aa32.79■■■□□ 2.84
RAPGEF1-206ENST00000438647 MSL1Q68DK7 614 aa32.79■■■□□ 2.84
RAPGEF1-206ENST00000438647 VSIG10Q8N0Z9 540 aa32.79■■■□□ 2.84
RAPGEF1-206ENST00000438647 PLEKHF1Q96S99 279 aa32.79■■■□□ 2.84
RAPGEF1-206ENST00000438647 RPS6KA4O75676 772 aa32.78■■■□□ 2.84
RAPGEF1-206ENST00000438647 CRKLP46109 303 aaKnown RBP32.78■■■□□ 2.84
RAPGEF1-206ENST00000438647 SMIM5Q71RC9 77 aa32.78■■■□□ 2.84
RAPGEF1-206ENST00000438647 TJP1Q07157 1748 aa32.77■■■□□ 2.84
RAPGEF1-206ENST00000438647 ZNF790Q6PG37 636 aa32.77■■■□□ 2.84
RAPGEF1-206ENST00000438647 SYT17Q9BSW7 474 aa32.77■■■□□ 2.84
RAPGEF1-206ENST00000438647 DNAJC10Q8IXB1 793 aa32.76■■■□□ 2.83
RAPGEF1-206ENST00000438647 SIPA1L3O60292 1781 aaPredicted RBP32.75■■■□□ 2.83
RAPGEF1-206ENST00000438647 DCAF8L1A6NGE4 600 aa32.75■■■□□ 2.83
RAPGEF1-206ENST00000438647 MCM10Q7L590 875 aa32.75■■■□□ 2.83
RAPGEF1-206ENST00000438647 UBR2Q8IWV8 1755 aa32.74■■■□□ 2.83
RAPGEF1-206ENST00000438647 BTBD11A6QL63 1104 aa32.74■■■□□ 2.83
RAPGEF1-206ENST00000438647 NFE2L2Q16236 605 aa32.73■■■□□ 2.83
RAPGEF1-206ENST00000438647 MYH14Q7Z406 1995 aaKnown RBP32.72■■■□□ 2.83
RAPGEF1-206ENST00000438647 RFC4P35249 363 aa32.71■■■□□ 2.83
RAPGEF1-206ENST00000438647 WDR43Q15061 677 aaKnown RBP eCLIP32.71■■■□□ 2.83
RAPGEF1-206ENST00000438647 ARHGEF1Q92888 912 aaKnown RBP32.71■■■□□ 2.83
RAPGEF1-206ENST00000438647 CCDC87Q9NVE4 849 aa32.71■■■□□ 2.83
RAPGEF1-206ENST00000438647 CYP19A1P11511 503 aaPredicted RBP32.7■■■□□ 2.83
RAPGEF1-206ENST00000438647 KLHL34Q8N239 644 aa32.7■■■□□ 2.83
RAPGEF1-206ENST00000438647 ZNF496Q96IT1 587 aaPredicted RBP32.7■■■□□ 2.83
RAPGEF1-206ENST00000438647 FMNL2Q96PY5 1086 aa32.7■■■□□ 2.83
RAPGEF1-206ENST00000438647 DCTN1Q14203 1278 aa32.69■■■□□ 2.82
RAPGEF1-206ENST00000438647 INTS5Q6P9B9 1019 aaKnown RBP32.69■■■□□ 2.82
RAPGEF1-206ENST00000438647 TEX13AQ9BXU3 409 aaPredicted RBP32.69■■■□□ 2.82
RAPGEF1-206ENST00000438647 HEG1Q9ULI3 1381 aa32.69■■■□□ 2.82
RAPGEF1-206ENST00000438647 STARD3NLO95772 234 aa32.68■■■□□ 2.82
RAPGEF1-206ENST00000438647 NLGN1Q8N2Q7 840 aa32.66■■■□□ 2.82
RAPGEF1-206ENST00000438647 TAF7Q15545 349 aaPredicted RBP32.65■■■□□ 2.82
RAPGEF1-206ENST00000438647 DLG5Q8TDM6 1919 aa32.64■■■□□ 2.82
RAPGEF1-206ENST00000438647 SOS1Q07889 1333 aaPredicted RBP32.62■■■□□ 2.81
RAPGEF1-206ENST00000438647 ZBTB1Q9Y2K1 713 aa32.62■■■□□ 2.81
RAPGEF1-206ENST00000438647 KCNQ3O43525 872 aa32.61■■■□□ 2.81
RAPGEF1-206ENST00000438647 GYS1P13807 737 aa32.61■■■□□ 2.81
RAPGEF1-206ENST00000438647 PNISRQ8TF01 805 aaKnown RBP32.61■■■□□ 2.81
RAPGEF1-206ENST00000438647 C4AP0C0L4 1744 aa32.6■■■□□ 2.81
RAPGEF1-206ENST00000438647 USP42Q9H9J4 1324 aaKnown RBP32.6■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms