RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 ZRANB1Q9UGI0 708 aa7.96□□□□□ -1.13
CSDE1-205ENST00000438362 LRRIQ1Q96JM4 1722 aa7.96□□□□□ -1.14
CSDE1-205ENST00000438362 TRDNQ13061 729 aa7.96□□□□□ -1.14
CSDE1-205ENST00000438362 SYNE3Q6ZMZ3 975 aa7.96□□□□□ -1.14
CSDE1-205ENST00000438362 DNAJC2Q99543 621 aaKnown RBP7.96□□□□□ -1.14
CSDE1-205ENST00000438362 USP26Q9BXU7 913 aa7.96□□□□□ -1.14
CSDE1-205ENST00000438362 ANAPC15P60006 121 aa7.96□□□□□ -1.14
CSDE1-205ENST00000438362 TPD52L1Q16890 204 aaPredicted RBP7.96□□□□□ -1.14
CSDE1-205ENST00000438362 PRPF40BQ6NWY9 871 aaKnown RBP7.96□□□□□ -1.14
CSDE1-205ENST00000438362 HOMER1Q86YM7 354 aa7.96□□□□□ -1.14
CSDE1-205ENST00000438362 ESYT1Q9BSJ8 1104 aa7.96□□□□□ -1.14
CSDE1-205ENST00000438362 PDCL3Q9H2J4 239 aa7.96□□□□□ -1.14
CSDE1-205ENST00000438362 BTBD11A6QL63 1104 aa7.95□□□□□ -1.14
CSDE1-205ENST00000438362 KRT24Q2M2I5 525 aa7.95□□□□□ -1.14
CSDE1-205ENST00000438362 ZNF771Q7L3S4 317 aaPredicted RBP7.95□□□□□ -1.14
CSDE1-205ENST00000438362 THEMISQ8N1K5 641 aaPredicted RBP7.95□□□□□ -1.14
CSDE1-205ENST00000438362 SPATA32Q96LK8 384 aa7.95□□□□□ -1.14
CSDE1-205ENST00000438362 SH2B1Q9NRF2 756 aaPredicted RBP7.95□□□□□ -1.14
CSDE1-205ENST00000438362 USP25Q9UHP3 1055 aa7.95□□□□□ -1.14
CSDE1-205ENST00000438362 TRIM29Q14134 588 aa7.95□□□□□ -1.14
CSDE1-205ENST00000438362 EIF4A2Q14240 407 aaKnown RBP7.95□□□□□ -1.14
CSDE1-205ENST00000438362 RALYLQ86SE5 291 aaKnown RBP7.95□□□□□ -1.14
CSDE1-205ENST00000438362 FERMT3Q86UX7 667 aa7.95□□□□□ -1.14
CSDE1-205ENST00000438362 ACEP12821 1306 aa7.95□□□□□ -1.14
CSDE1-205ENST00000438362 TRPM1Q7Z4N2 1603 aa7.95□□□□□ -1.14
CSDE1-205ENST00000438362 PRIM1P49642 420 aaKnown RBP7.95□□□□□ -1.14
CSDE1-205ENST00000438362 CEBPZQ03701 1054 aaKnown RBP7.95□□□□□ -1.14
CSDE1-205ENST00000438362 MAP3K11Q16584 847 aa7.95□□□□□ -1.14
CSDE1-205ENST00000438362 ESCO1Q5FWF5 840 aa7.95□□□□□ -1.14
CSDE1-205ENST00000438362 ZGPATQ8N5A5 531 aaKnown RBP7.95□□□□□ -1.14
CSDE1-205ENST00000438362 PPIP5K1Q6PFW1 1433 aa7.95□□□□□ -1.14
CSDE1-205ENST00000438362 YTHDC2Q9H6S0 1430 aaKnown RBP7.95□□□□□ -1.14
CSDE1-205ENST00000438362 TRPM2O94759 1503 aa7.95□□□□□ -1.14
CSDE1-205ENST00000438362 APPP05067 770 aa7.94□□□□□ -1.14
CSDE1-205ENST00000438362 CDC42BPAQ5VT25 1732 aa7.94□□□□□ -1.14
CSDE1-205ENST00000438362 TTC37Q6PGP7 1564 aa7.94□□□□□ -1.14
CSDE1-205ENST00000438362 DNAAF4Q8WXU2 420 aa7.94□□□□□ -1.14
CSDE1-205ENST00000438362 ANTXR1Q9H6X2 564 aa7.94□□□□□ -1.14
CSDE1-205ENST00000438362 PREX2Q70Z35 1606 aa7.94□□□□□ -1.14
CSDE1-205ENST00000438362 ADCY10Q96PN6 1610 aa7.94□□□□□ -1.14
CSDE1-205ENST00000438362 ABCC1P33527 1531 aa7.94□□□□□ -1.14
CSDE1-205ENST00000438362 NPHP1O15259 732 aa7.94□□□□□ -1.14
CSDE1-205ENST00000438362 STX6O43752 255 aa7.94□□□□□ -1.14
CSDE1-205ENST00000438362 KRT32Q14532 448 aa7.94□□□□□ -1.14
CSDE1-205ENST00000438362 WASHC4Q2M389 1173 aa7.94□□□□□ -1.14
CSDE1-205ENST00000438362 PPP1R42Q7Z4L9 355 aa7.94□□□□□ -1.14
CSDE1-205ENST00000438362 ZNF396Q96N95 335 aaPredicted RBP7.94□□□□□ -1.14
CSDE1-205ENST00000438362 MYO5CQ9NQX4 1742 aa7.94□□□□□ -1.14
CSDE1-205ENST00000438362 NPATQ14207 1427 aa7.94□□□□□ -1.14
CSDE1-205ENST00000438362 UBE2Q2Q8WVN8 375 aa7.94□□□□□ -1.14
CSDE1-205ENST00000438362 PKNOX2Q96KN3 472 aa7.94□□□□□ -1.14
CSDE1-205ENST00000438362 IL13P35225 146 aa7.93□□□□□ -1.14
CSDE1-205ENST00000438362 ATP8B2P98198 1209 aa7.93□□□□□ -1.14
CSDE1-205ENST00000438362 HS1BP3Q53T59 392 aa7.93□□□□□ -1.14
CSDE1-205ENST00000438362 LARP6Q9BRS8 491 aaKnown RBP7.93□□□□□ -1.14
CSDE1-205ENST00000438362 SPG7Q9UQ90 795 aa7.93□□□□□ -1.14
CSDE1-205ENST00000438362 USP19O94966 1318 aa7.93□□□□□ -1.14
CSDE1-205ENST00000438362 DDX54Q8TDD1 881 aaKnown RBP7.93□□□□□ -1.14
CSDE1-205ENST00000438362 CFAP45Q9UL16 551 aa7.93□□□□□ -1.14
CSDE1-205ENST00000438362 UBE2HP62256 183 aa7.93□□□□□ -1.14
CSDE1-205ENST00000438362 UVSSAQ2YD98 709 aa7.93□□□□□ -1.14
CSDE1-205ENST00000438362 RHPN1Q8TCX5 695 aa7.93□□□□□ -1.14
CSDE1-205ENST00000438362 OTUD7AQ8TE49 926 aaPredicted RBP7.93□□□□□ -1.14
CSDE1-205ENST00000438362 SCAND2PQ9GZW5 306 aaPredicted RBP7.93□□□□□ -1.14
CSDE1-205ENST00000438362 ECHDC1Q9NTX5 307 aa7.93□□□□□ -1.14
CSDE1-205ENST00000438362 ZKSCAN5Q9Y2L8 839 aa7.93□□□□□ -1.14
CSDE1-205ENST00000438362 PIK3R4Q99570 1358 aa7.93□□□□□ -1.14
CSDE1-205ENST00000438362 PLEKHF1Q96S99 279 aa7.92□□□□□ -1.14
CSDE1-205ENST00000438362 MYOM2P54296 1465 aa7.92□□□□□ -1.14
CSDE1-205ENST00000438362 AKAP17AQ02040 695 aaKnown RBP7.92□□□□□ -1.14
CSDE1-205ENST00000438362 CREBRFQ8IUR6 639 aa7.92□□□□□ -1.14
CSDE1-205ENST00000438362 CCAR2Q8N163 923 aaKnown RBP7.92□□□□□ -1.14
CSDE1-205ENST00000438362 HOOK1Q9UJC3 728 aaKnown RBP7.92□□□□□ -1.14
CSDE1-205ENST00000438362 ADCY5O95622 1261 aa7.92□□□□□ -1.14
CSDE1-205ENST00000438362 ME1P48163 572 aa7.92□□□□□ -1.14
CSDE1-205ENST00000438362 STK38Q15208 465 aa7.92□□□□□ -1.14
CSDE1-205ENST00000438362 USHBP1Q8N6Y0 703 aa7.92□□□□□ -1.14
CSDE1-205ENST00000438362 CCDC112Q8NEF3 446 aa7.92□□□□□ -1.14
CSDE1-205ENST00000438362 BCL11BQ9C0K0 894 aaPredicted RBP7.92□□□□□ -1.14
CSDE1-205ENST00000438362 BOLA2Q9H3K6 86 aa7.92□□□□□ -1.14
CSDE1-205ENST00000438362 AMOTL2Q9Y2J4 779 aa7.92□□□□□ -1.14
CSDE1-205ENST00000438362 PLXNC1O60486 1568 aa7.92□□□□□ -1.14
CSDE1-205ENST00000438362 DHX16O60231 1041 aaKnown RBP7.92□□□□□ -1.14
CSDE1-205ENST00000438362 HCLS1P14317 486 aaPredicted RBP7.92□□□□□ -1.14
CSDE1-205ENST00000438362 MYL6BP14649 208 aa7.92□□□□□ -1.14
CSDE1-205ENST00000438362 CAMK4Q16566 473 aa7.92□□□□□ -1.14
CSDE1-205ENST00000438362 NFXL1Q6ZNB6 911 aa7.92□□□□□ -1.14
CSDE1-205ENST00000438362 INTS4Q96HW7 963 aaKnown RBP7.92□□□□□ -1.14
CSDE1-205ENST00000438362 FMNL2Q96PY5 1086 aa7.92□□□□□ -1.14
CSDE1-205ENST00000438362 CFAP65Q6ZU64 1925 aaKnown RBP7.91□□□□□ -1.14
CSDE1-205ENST00000438362 PI4KAP2A4QPH2 592 aa7.91□□□□□ -1.14
CSDE1-205ENST00000438362 OFD1O75665 1012 aa7.91□□□□□ -1.14
CSDE1-205ENST00000438362 ZSCAN22P10073 491 aaPredicted RBP7.91□□□□□ -1.14
CSDE1-205ENST00000438362 GJB2P29033 226 aa7.91□□□□□ -1.14
CSDE1-205ENST00000438362 PI4KAP1Q8N8J0 262 aa7.91□□□□□ -1.14
CSDE1-205ENST00000438362 RASSF8Q8NHQ8 419 aa7.91□□□□□ -1.14
CSDE1-205ENST00000438362 DBF4Q9UBU7 674 aaPredicted RBP7.91□□□□□ -1.14
CSDE1-205ENST00000438362 RIMS2Q9UQ26 1411 aa7.91□□□□□ -1.14
CSDE1-205ENST00000438362 FSD2A1L4K1 749 aa7.91□□□□□ -1.14
CSDE1-205ENST00000438362 USP48Q86UV5 1035 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms