RNA–Protein interactions for RNA: ENST00000438347.1

CCND3P1-201, Transcript of cyclin D3 pseudogene 1, humanhuman

BASIC

Gene CCND3P1, Length 580 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3P1-201ENST00000438347 PRKAR2BP31323 418 aa17.67■□□□□ 0.42
CCND3P1-201ENST00000438347 U2AF1Q01081 240 aaKnown RBP eCLIP17.67■□□□□ 0.42
CCND3P1-201ENST00000438347 ITPK1Q13572 414 aa17.67■□□□□ 0.42
CCND3P1-201ENST00000438347 GAS2L2Q8NHY3 880 aa17.67■□□□□ 0.42
CCND3P1-201ENST00000438347 SLC16A10Q8TF71 515 aa17.67■□□□□ 0.42
CCND3P1-201ENST00000438347 PHACTR3Q96KR7 559 aa17.67■□□□□ 0.42
CCND3P1-201ENST00000438347 SLC4A9Q96Q91 983 aa17.67■□□□□ 0.42
CCND3P1-201ENST00000438347 SGIP1Q9BQI5 828 aa17.67■□□□□ 0.42
CCND3P1-201ENST00000438347 ATF5Q9Y2D1 282 aaPredicted RBP17.67■□□□□ 0.42
CCND3P1-201ENST00000438347 LINC00116Q8NCU8 138 aa17.66■□□□□ 0.42
CCND3P1-201ENST00000438347 SLC52A2Q9HAB3 445 aa17.66■□□□□ 0.42
CCND3P1-201ENST00000438347 ATP6V1AP38606 617 aa17.65■□□□□ 0.42
CCND3P1-201ENST00000438347 COL23A1Q86Y22 540 aaPredicted RBP17.64■□□□□ 0.41
CCND3P1-201ENST00000438347 MRC1P22897 1456 aa17.63■□□□□ 0.41
CCND3P1-201ENST00000438347 GNAT3A8MTJ3 354 aa17.63■□□□□ 0.41
CCND3P1-201ENST00000438347 FLAD1Q8NFF5 587 aa17.63■□□□□ 0.41
CCND3P1-201ENST00000438347 IL17REQ8NFR9 667 aa17.63■□□□□ 0.41
CCND3P1-201ENST00000438347 MAP3K5Q99683 1374 aa17.63■□□□□ 0.41
CCND3P1-201ENST00000438347 AMIGO3Q86WK7 504 aa17.62■□□□□ 0.41
CCND3P1-201ENST00000438347 AK7Q96M32 723 aa17.62■□□□□ 0.41
CCND3P1-201ENST00000438347 RBM42Q9BTD8 480 aaKnown RBP17.62■□□□□ 0.41
CCND3P1-201ENST00000438347 PTCD1O75127 700 aaKnown RBP17.61■□□□□ 0.41
CCND3P1-201ENST00000438347 C5P01031 1676 aa17.61■□□□□ 0.41
CCND3P1-201ENST00000438347 ADAMTS7Q9UKP4 1686 aa17.61■□□□□ 0.41
CCND3P1-201ENST00000438347 RC3H1Q5TC82 1133 aaKnown RBP17.6■□□□□ 0.41
CCND3P1-201ENST00000438347 MYBBP1AQ9BQG0 1328 aaKnown RBP17.6■□□□□ 0.41
CCND3P1-201ENST00000438347 QSER1Q2KHR3 1735 aa17.6■□□□□ 0.41
CCND3P1-201ENST00000438347 C4BP0C0L5 1744 aa17.59■□□□□ 0.41
CCND3P1-201ENST00000438347 CEMIPQ8WUJ3 1361 aa17.59■□□□□ 0.41
CCND3P1-201ENST00000438347 SSFA2P28290 1259 aa17.59■□□□□ 0.41
CCND3P1-201ENST00000438347 SCN11AQ9UI33 1791 aa17.58■□□□□ 0.41
CCND3P1-201ENST00000438347 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.58■□□□□ 0.4
CCND3P1-201ENST00000438347 PLEKHF1Q96S99 279 aa17.58■□□□□ 0.4
CCND3P1-201ENST00000438347 PRKRIP1Q9H875 184 aaPredicted RBP17.58■□□□□ 0.4
CCND3P1-201ENST00000438347 CNTNAP4Q9C0A0 1308 aa17.57■□□□□ 0.4
CCND3P1-201ENST00000438347 TAF1LQ8IZX4 1826 aa17.57■□□□□ 0.4
CCND3P1-201ENST00000438347 GNPATO15228 680 aa17.57■□□□□ 0.4
CCND3P1-201ENST00000438347 MSH5O43196 834 aa17.57■□□□□ 0.4
CCND3P1-201ENST00000438347 YY1P25490 414 aa17.57■□□□□ 0.4
CCND3P1-201ENST00000438347 POLD1P28340 1107 aa17.57■□□□□ 0.4
CCND3P1-201ENST00000438347 SLC39A6Q13433 755 aa17.57■□□□□ 0.4
CCND3P1-201ENST00000438347 SMIM5Q71RC9 77 aa17.57■□□□□ 0.4
CCND3P1-201ENST00000438347 ARXQ96QS3 562 aa17.57■□□□□ 0.4
CCND3P1-201ENST00000438347 ZNF831Q5JPB2 1677 aa17.57■□□□□ 0.4
CCND3P1-201ENST00000438347 HTATSF1O43719 755 aaKnown RBP17.56■□□□□ 0.4
CCND3P1-201ENST00000438347 TEFQ10587 303 aa17.56■□□□□ 0.4
CCND3P1-201ENST00000438347 TUBGCP6Q96RT7 1819 aa17.56■□□□□ 0.4
CCND3P1-201ENST00000438347 ZNF316A6NFI3 1004 aaPredicted RBP17.55■□□□□ 0.4
CCND3P1-201ENST00000438347 PHF14O94880 888 aa17.55■□□□□ 0.4
CCND3P1-201ENST00000438347 RPS6KA4O75676 772 aa17.54■□□□□ 0.4
CCND3P1-201ENST00000438347 VSIG10Q8N0Z9 540 aa17.54■□□□□ 0.4
CCND3P1-201ENST00000438347 FHDC1Q9C0D6 1143 aaPredicted RBP17.54■□□□□ 0.4
CCND3P1-201ENST00000438347 RTCBQ9Y3I0 505 aaKnown RBP17.54■□□□□ 0.4
CCND3P1-201ENST00000438347 KCPQ6ZWJ8 1503 aa17.53■□□□□ 0.4
CCND3P1-201ENST00000438347 ADRA2BP18089 450 aa17.53■□□□□ 0.4
CCND3P1-201ENST00000438347 CRKLP46109 303 aaKnown RBP17.53■□□□□ 0.4
CCND3P1-201ENST00000438347 ZNF790Q6PG37 636 aa17.53■□□□□ 0.4
CCND3P1-201ENST00000438347 DNAJC10Q8IXB1 793 aa17.53■□□□□ 0.4
CCND3P1-201ENST00000438347 RTF1Q92541 710 aaKnown RBP17.53■□□□□ 0.4
CCND3P1-201ENST00000438347 SYT17Q9BSW7 474 aa17.53■□□□□ 0.4
CCND3P1-201ENST00000438347 PNNQ9H307 717 aaKnown RBP17.53■□□□□ 0.4
CCND3P1-201ENST00000438347 MSL1Q68DK7 614 aa17.52■□□□□ 0.4
CCND3P1-201ENST00000438347 INTS5Q6P9B9 1019 aaKnown RBP17.52■□□□□ 0.4
CCND3P1-201ENST00000438347 COL24A1Q17RW2 1714 aa17.52■□□□□ 0.39
CCND3P1-201ENST00000438347 NEFMP07197 916 aa17.51■□□□□ 0.39
CCND3P1-201ENST00000438347 CYP19A1P11511 503 aaPredicted RBP17.51■□□□□ 0.39
CCND3P1-201ENST00000438347 NFE2L2Q16236 605 aa17.51■□□□□ 0.39
CCND3P1-201ENST00000438347 TRAPPC3LQ5T215 181 aa17.51■□□□□ 0.39
CCND3P1-201ENST00000438347 MCM10Q7L590 875 aa17.51■□□□□ 0.39
CCND3P1-201ENST00000438347 TTC5Q8N0Z6 440 aa17.51■□□□□ 0.39
CCND3P1-201ENST00000438347 CICQ96RK0 1608 aaPredicted RBP17.5■□□□□ 0.39
CCND3P1-201ENST00000438347 UBR3Q6ZT12 1888 aa17.5■□□□□ 0.39
CCND3P1-201ENST00000438347 DCTN1Q14203 1278 aa17.5■□□□□ 0.39
CCND3P1-201ENST00000438347 ARHGEF1Q92888 912 aaKnown RBP17.5■□□□□ 0.39
CCND3P1-201ENST00000438347 ZNF496Q96IT1 587 aaPredicted RBP17.5■□□□□ 0.39
CCND3P1-201ENST00000438347 BTBD11A6QL63 1104 aa17.49■□□□□ 0.39
CCND3P1-201ENST00000438347 CCDC87Q9NVE4 849 aa17.49■□□□□ 0.39
CCND3P1-201ENST00000438347 COL5A3P25940 1745 aaPredicted RBP17.48■□□□□ 0.39
CCND3P1-201ENST00000438347 KCNQ3O43525 872 aa17.48■□□□□ 0.39
CCND3P1-201ENST00000438347 HEG1Q9ULI3 1381 aa17.48■□□□□ 0.39
CCND3P1-201ENST00000438347 MAPK8IP3Q9UPT6 1336 aa17.47■□□□□ 0.39
CCND3P1-201ENST00000438347 TJP1Q07157 1748 aa17.47■□□□□ 0.39
CCND3P1-201ENST00000438347 FMNL2Q96PY5 1086 aa17.47■□□□□ 0.39
CCND3P1-201ENST00000438347 RFC4P35249 363 aa17.46■□□□□ 0.39
CCND3P1-201ENST00000438347 TAF7Q15545 349 aaPredicted RBP17.46■□□□□ 0.39
CCND3P1-201ENST00000438347 TEX13AQ9BXU3 409 aaPredicted RBP17.46■□□□□ 0.39
CCND3P1-201ENST00000438347 SOS1Q07889 1333 aaPredicted RBP17.46■□□□□ 0.38
CCND3P1-201ENST00000438347 STARD3NLO95772 234 aa17.45■□□□□ 0.38
CCND3P1-201ENST00000438347 GYS1P13807 737 aa17.45■□□□□ 0.38
CCND3P1-201ENST00000438347 NLGN1Q8N2Q7 840 aa17.45■□□□□ 0.38
CCND3P1-201ENST00000438347 ADAMTS8Q9UP79 889 aa17.45■□□□□ 0.38
CCND3P1-201ENST00000438347 ZBTB1Q9Y2K1 713 aa17.45■□□□□ 0.38
CCND3P1-201ENST00000438347 SIPA1L3O60292 1781 aaPredicted RBP17.45■□□□□ 0.38
CCND3P1-201ENST00000438347 MYH14Q7Z406 1995 aaKnown RBP17.44■□□□□ 0.38
CCND3P1-201ENST00000438347 UBR2Q8IWV8 1755 aa17.44■□□□□ 0.38
CCND3P1-201ENST00000438347 TMPOP42166 694 aaKnown RBP17.44■□□□□ 0.38
CCND3P1-201ENST00000438347 WDR43Q15061 677 aaKnown RBP eCLIP17.44■□□□□ 0.38
CCND3P1-201ENST00000438347 USP42Q9H9J4 1324 aaKnown RBP17.44■□□□□ 0.38
CCND3P1-201ENST00000438347 CD2APQ9Y5K6 639 aa17.43■□□□□ 0.38
CCND3P1-201ENST00000438347 GRIN3BO60391 1043 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms