RNA–Protein interactions for RNA: ENST00000438130.6

GTF2I-202, Transcript of general transcription factor IIi, humanhuman

TSL 4

Gene GTF2I, Length 836 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-202ENST00000438130 MEGF6O75095 1541 aa12.4□□□□□ -0.42
GTF2I-202ENST00000438130 RTL1A6NKG5 1358 aa12.4□□□□□ -0.42
GTF2I-202ENST00000438130 ANKRD36BQ8N2N9 1353 aa12.4□□□□□ -0.42
GTF2I-202ENST00000438130 MAP3K19Q56UN5 1328 aa12.39□□□□□ -0.43
GTF2I-202ENST00000438130 TULP1O00294 542 aaPredicted RBP12.39□□□□□ -0.43
GTF2I-202ENST00000438130 KIF20BQ96Q89 1820 aa12.39□□□□□ -0.43
GTF2I-202ENST00000438130 ANKRD26Q9UPS8 1709 aa12.38□□□□□ -0.43
GTF2I-202ENST00000438130 ST20-MTHFSA0A0A6YYL1 179 aa12.38□□□□□ -0.43
GTF2I-202ENST00000438130 E2F4Q16254 413 aa12.38□□□□□ -0.43
GTF2I-202ENST00000438130 SYT17Q9BSW7 474 aa12.38□□□□□ -0.43
GTF2I-202ENST00000438130 HOXC9P31274 260 aa12.37□□□□□ -0.43
GTF2I-202ENST00000438130 FHDC1Q9C0D6 1143 aaPredicted RBP12.37□□□□□ -0.43
GTF2I-202ENST00000438130 SLC27A3Q5K4L6 730 aa12.36□□□□□ -0.43
GTF2I-202ENST00000438130 ARHGEF1Q92888 912 aaKnown RBP12.36□□□□□ -0.43
GTF2I-202ENST00000438130 TMEM106CQ9BVX2 250 aa12.36□□□□□ -0.43
GTF2I-202ENST00000438130 NCAPD2Q15021 1401 aa12.36□□□□□ -0.43
GTF2I-202ENST00000438130 PKD1L3Q7Z443 1732 aa12.35□□□□□ -0.43
GTF2I-202ENST00000438130 GOLGB1Q14789 3259 aaKnown RBP12.35□□□□□ -0.43
GTF2I-202ENST00000438130 PNPLA7Q6ZV29 1317 aa12.35□□□□□ -0.43
GTF2I-202ENST00000438130 TAF1LQ8IZX4 1826 aa12.34□□□□□ -0.43
GTF2I-202ENST00000438130 TOGARAM1Q9Y4F4 1720 aa12.34□□□□□ -0.43
GTF2I-202ENST00000438130 FBLN1P23142 703 aa12.34□□□□□ -0.43
GTF2I-202ENST00000438130 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.34□□□□□ -0.43
GTF2I-202ENST00000438130 COG3Q96JB2 828 aa12.34□□□□□ -0.43
GTF2I-202ENST00000438130 KIF24Q5T7B8 1368 aa12.33□□□□□ -0.44
GTF2I-202ENST00000438130 C5P01031 1676 aa12.33□□□□□ -0.44
GTF2I-202ENST00000438130 FYB1O15117 783 aa12.33□□□□□ -0.44
GTF2I-202ENST00000438130 SLC16A10Q8TF71 515 aa12.33□□□□□ -0.44
GTF2I-202ENST00000438130 ARXQ96QS3 562 aa12.33□□□□□ -0.44
GTF2I-202ENST00000438130 USP47Q96K76 1375 aa12.32□□□□□ -0.44
GTF2I-202ENST00000438130 MS4A4AQ96JQ5 239 aa12.32□□□□□ -0.44
GTF2I-202ENST00000438130 CGNL1Q0VF96 1302 aa12.32□□□□□ -0.44
GTF2I-202ENST00000438130 ITGB4P16144 1822 aa12.32□□□□□ -0.44
GTF2I-202ENST00000438130 INSRP06213 1382 aa12.31□□□□□ -0.44
GTF2I-202ENST00000438130 PDE4AP27815 886 aa12.31□□□□□ -0.44
GTF2I-202ENST00000438130 PRIM1P49642 420 aaKnown RBP12.31□□□□□ -0.44
GTF2I-202ENST00000438130 MKRN3Q13064 507 aaKnown RBP12.31□□□□□ -0.44
GTF2I-202ENST00000438130 NBPF6Q5VWK0 638 aa12.31□□□□□ -0.44
GTF2I-202ENST00000438130 ZNF784Q8NCA9 323 aaPredicted RBP12.31□□□□□ -0.44
GTF2I-202ENST00000438130 DDX54Q8TDD1 881 aaKnown RBP12.31□□□□□ -0.44
GTF2I-202ENST00000438130 LTV1Q96GA3 475 aaPredicted RBP12.31□□□□□ -0.44
GTF2I-202ENST00000438130 MS4A3Q96HJ5 214 aa12.31□□□□□ -0.44
GTF2I-202ENST00000438130 NBPF4Q96M43 638 aa12.31□□□□□ -0.44
GTF2I-202ENST00000438130 LARP6Q9BRS8 491 aaKnown RBP12.31□□□□□ -0.44
GTF2I-202ENST00000438130 MAP2P11137 1827 aaKnown RBP12.3□□□□□ -0.44
GTF2I-202ENST00000438130 RRS1Q15050 365 aaKnown RBP12.3□□□□□ -0.44
GTF2I-202ENST00000438130 ZCRB1Q8TBF4 217 aaKnown RBP12.3□□□□□ -0.44
GTF2I-202ENST00000438130 FLT4P35916 1363 aa12.3□□□□□ -0.44
GTF2I-202ENST00000438130 AMPHP49418 695 aa12.29□□□□□ -0.44
GTF2I-202ENST00000438130 UBR3Q6ZT12 1888 aa12.28□□□□□ -0.44
GTF2I-202ENST00000438130 KCNQ4P56696 695 aa12.28□□□□□ -0.44
GTF2I-202ENST00000438130 GGNBP2Q9H3C7 697 aa12.28□□□□□ -0.44
GTF2I-202ENST00000438130 SMG6Q86US8 1419 aaKnown RBP12.28□□□□□ -0.44
GTF2I-202ENST00000438130 TMF1P82094 1093 aa12.27□□□□□ -0.45
GTF2I-202ENST00000438130 TRPC6Q9Y210 931 aa12.27□□□□□ -0.45
GTF2I-202ENST00000438130 C4BP0C0L5 1744 aa12.27□□□□□ -0.45
GTF2I-202ENST00000438130 HSP90AB2PQ58FF8 381 aa12.26□□□□□ -0.45
GTF2I-202ENST00000438130 CARD14Q9BXL6 1004 aa12.26□□□□□ -0.45
GTF2I-202ENST00000438130 CYP27B1O15528 508 aa12.25□□□□□ -0.45
GTF2I-202ENST00000438130 USHBP1Q8N6Y0 703 aa12.25□□□□□ -0.45
GTF2I-202ENST00000438130 SYTL4Q96C24 671 aaPredicted RBP12.25□□□□□ -0.45
GTF2I-202ENST00000438130 TFCP2L1Q9NZI6 479 aa12.25□□□□□ -0.45
GTF2I-202ENST00000438130 CCNL1Q9UK58 526 aaPredicted RBP12.25□□□□□ -0.45
GTF2I-202ENST00000438130 PCDH11XQ9BZA7 1347 aa12.25□□□□□ -0.45
GTF2I-202ENST00000438130 PCDH11YQ9BZA8 1340 aa12.25□□□□□ -0.45
GTF2I-202ENST00000438130 NSD3Q9BZ95 1437 aa12.25□□□□□ -0.45
GTF2I-202ENST00000438130 C19orf67A6NJJ6 358 aa12.24□□□□□ -0.45
GTF2I-202ENST00000438130 COL23A1Q86Y22 540 aaPredicted RBP12.24□□□□□ -0.45
GTF2I-202ENST00000438130 DDX27Q96GQ7 796 aaKnown RBP12.24□□□□□ -0.45
GTF2I-202ENST00000438130 PLEKHG2Q9H7P9 1386 aa12.24□□□□□ -0.45
GTF2I-202ENST00000438130 PALLDQ8WX93 1383 aa12.23□□□□□ -0.45
GTF2I-202ENST00000438130 SEMA3EO15041 775 aa12.23□□□□□ -0.45
GTF2I-202ENST00000438130 TATP17735 454 aaPredicted RBP12.23□□□□□ -0.45
GTF2I-202ENST00000438130 POLD1P28340 1107 aa12.23□□□□□ -0.45
GTF2I-202ENST00000438130 MFSD10Q14728 455 aa12.23□□□□□ -0.45
GTF2I-202ENST00000438130 CDCA8Q53HL2 280 aa12.23□□□□□ -0.45
GTF2I-202ENST00000438130 NLGN2Q8NFZ4 835 aa12.23□□□□□ -0.45
GTF2I-202ENST00000438130 RAPGEF4Q8WZA2 1011 aa12.23□□□□□ -0.45
GTF2I-202ENST00000438130 CRISPLD2Q9H0B8 497 aa12.23□□□□□ -0.45
GTF2I-202ENST00000438130 ZNF831Q5JPB2 1677 aa12.22□□□□□ -0.45
GTF2I-202ENST00000438130 EMILIN1Q9Y6C2 1016 aa12.22□□□□□ -0.45
GTF2I-202ENST00000438130 WASHC2AQ641Q2 1341 aa12.21□□□□□ -0.45
GTF2I-202ENST00000438130 TESPA1A2RU30 521 aaPredicted RBP12.21□□□□□ -0.45
GTF2I-202ENST00000438130 TIE1P35590 1138 aa12.21□□□□□ -0.45
GTF2I-202ENST00000438130 AMIGO3Q86WK7 504 aa12.21□□□□□ -0.45
GTF2I-202ENST00000438130 YBX3P16989 372 aaKnown RBP eCLIP12.2□□□□□ -0.46
GTF2I-202ENST00000438130 TIMELESSQ9UNS1 1208 aa12.2□□□□□ -0.46
GTF2I-202ENST00000438130 KIAA1551Q9HCM1 1747 aa12.2□□□□□ -0.46
GTF2I-202ENST00000438130 KIF13BQ9NQT8 1826 aa12.19□□□□□ -0.46
GTF2I-202ENST00000438130 C1QTNF8P60827 252 aa12.19□□□□□ -0.46
GTF2I-202ENST00000438130 GPR162Q16538 588 aa12.19□□□□□ -0.46
GTF2I-202ENST00000438130 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.19□□□□□ -0.46
GTF2I-202ENST00000438130 CICQ96RK0 1608 aaPredicted RBP12.19□□□□□ -0.46
GTF2I-202ENST00000438130 ADCY9O60503 1353 aa12.18□□□□□ -0.46
GTF2I-202ENST00000438130 COL5A3P25940 1745 aaPredicted RBP12.18□□□□□ -0.46
GTF2I-202ENST00000438130 TTLL13PA6NNM8 815 aa12.18□□□□□ -0.46
GTF2I-202ENST00000438130 HMGB2P26583 209 aaKnown RBP12.18□□□□□ -0.46
GTF2I-202ENST00000438130 TRIM26Q12899 539 aaPredicted RBP12.18□□□□□ -0.46
GTF2I-202ENST00000438130 FLAD1Q8NFF5 587 aa12.18□□□□□ -0.46
GTF2I-202ENST00000438130 PIGBQ92521 554 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms