RNA–Protein interactions for RNA: ENST00000438107.1

FAM239A-202, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 5 BASIC

Gene FAM239A, Length 2,155 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-202ENST00000438107 ARHGAP23Q9P227 1491 aa23.67■■□□□ 1.38
FAM239A-202ENST00000438107 RGPD8O14715 1765 aaPredicted RBP23.67■■□□□ 1.38
FAM239A-202ENST00000438107 TRIM44Q96DX7 344 aaPredicted RBP23.67■■□□□ 1.38
FAM239A-202ENST00000438107 USP54Q70EL1 1684 aa23.66■■□□□ 1.38
FAM239A-202ENST00000438107 F6X3S4 739 aa23.66■■□□□ 1.38
FAM239A-202ENST00000438107 GNAI3P08754 354 aa23.66■■□□□ 1.38
FAM239A-202ENST00000438107 DIP2AQ14689 1571 aa23.66■■□□□ 1.38
FAM239A-202ENST00000438107 ZNF445P59923 1031 aa23.65■■□□□ 1.38
FAM239A-202ENST00000438107 PXDNLA1KZ92 1463 aa23.65■■□□□ 1.38
FAM239A-202ENST00000438107 FER1L4A9Z1Z3 1794 aa23.65■■□□□ 1.38
FAM239A-202ENST00000438107 CCDC173Q0VFZ6 552 aa23.65■■□□□ 1.38
FAM239A-202ENST00000438107 CCDC30Q5VVM6 783 aa23.65■■□□□ 1.38
FAM239A-202ENST00000438107 EYA1Q99502 592 aa23.65■■□□□ 1.38
FAM239A-202ENST00000438107 AMOTL2Q9Y2J4 779 aa23.65■■□□□ 1.38
FAM239A-202ENST00000438107 MCTP1Q6DN14 999 aa23.64■■□□□ 1.38
FAM239A-202ENST00000438107 LMBRD1Q9NUN5 540 aa23.64■■□□□ 1.38
FAM239A-202ENST00000438107 AMPHP49418 695 aa23.64■■□□□ 1.37
FAM239A-202ENST00000438107 PPP1R9BQ96SB3 815 aa23.64■■□□□ 1.37
FAM239A-202ENST00000438107 BABAM1Q9NWV8 329 aa23.64■■□□□ 1.37
FAM239A-202ENST00000438107 TBX22Q9Y458 520 aa23.64■■□□□ 1.37
FAM239A-202ENST00000438107 SOX12O15370 315 aa23.63■■□□□ 1.37
FAM239A-202ENST00000438107 MCM2P49736 904 aa23.63■■□□□ 1.37
FAM239A-202ENST00000438107 LRRCC1Q9C099 1032 aa23.63■■□□□ 1.37
FAM239A-202ENST00000438107 ATP8B2P98198 1209 aa23.62■■□□□ 1.37
FAM239A-202ENST00000438107 FLIIQ13045 1269 aa23.62■■□□□ 1.37
FAM239A-202ENST00000438107 NASPP49321 788 aaPredicted RBP23.61■■□□□ 1.37
FAM239A-202ENST00000438107 MARF1Q9Y4F3 1742 aaKnown RBP23.61■■□□□ 1.37
FAM239A-202ENST00000438107 GNAT3A8MTJ3 354 aa23.6■■□□□ 1.37
FAM239A-202ENST00000438107 NGDNQ8NEJ9 315 aaKnown RBP23.6■■□□□ 1.37
FAM239A-202ENST00000438107 ESYT1Q9BSJ8 1104 aa23.6■■□□□ 1.37
FAM239A-202ENST00000438107 SRCIN1Q9C0H9 1055 aa23.6■■□□□ 1.37
FAM239A-202ENST00000438107 ANAPC15P60006 121 aa23.59■■□□□ 1.37
FAM239A-202ENST00000438107 ZGPATQ8N5A5 531 aaKnown RBP23.59■■□□□ 1.37
FAM239A-202ENST00000438107 ANP32BQ92688 251 aaKnown RBP23.59■■□□□ 1.37
FAM239A-202ENST00000438107 EXOC6BQ9Y2D4 811 aa23.59■■□□□ 1.37
FAM239A-202ENST00000438107 NWD1Q149M9 1564 aa23.59■■□□□ 1.37
FAM239A-202ENST00000438107 MX1P20591 662 aa23.59■■□□□ 1.37
FAM239A-202ENST00000438107 MCCP23508 829 aa23.59■■□□□ 1.37
FAM239A-202ENST00000438107 PKP1Q13835 747 aa23.59■■□□□ 1.37
FAM239A-202ENST00000438107 IL17RAQ96F46 866 aa23.59■■□□□ 1.37
FAM239A-202ENST00000438107 STAP2Q9UGK3 403 aa23.59■■□□□ 1.37
FAM239A-202ENST00000438107 ANKARQ7Z5J8 1434 aa23.59■■□□□ 1.37
FAM239A-202ENST00000438107 AOX1Q06278 1338 aa23.58■■□□□ 1.37
FAM239A-202ENST00000438107 ERBB4Q15303 1308 aa23.58■■□□□ 1.37
FAM239A-202ENST00000438107 FKBP5Q13451 457 aaPredicted RBP23.58■■□□□ 1.37
FAM239A-202ENST00000438107 EPB41L2O43491 1005 aaKnown RBP23.57■■□□□ 1.36
FAM239A-202ENST00000438107 ZDHHC9Q9Y397 364 aa23.57■■□□□ 1.36
FAM239A-202ENST00000438107 MAP3K5Q99683 1374 aa23.56■■□□□ 1.36
FAM239A-202ENST00000438107 ZSCAN23Q3MJ62 389 aa23.56■■□□□ 1.36
FAM239A-202ENST00000438107 PNMA6EA0A0J9YXQ4 647 aa23.55■■□□□ 1.36
FAM239A-202ENST00000438107 NEK4P51957 841 aa23.55■■□□□ 1.36
FAM239A-202ENST00000438107 CUL4AQ13619 759 aa23.55■■□□□ 1.36
FAM239A-202ENST00000438107 CAVIN1Q6NZI2 390 aaKnown RBP23.55■■□□□ 1.36
FAM239A-202ENST00000438107 NAP1L5Q96NT1 182 aaPredicted RBP23.55■■□□□ 1.36
FAM239A-202ENST00000438107 CHMLP26374 656 aa23.54■■□□□ 1.36
FAM239A-202ENST00000438107 TMX3Q96JJ7 454 aa23.54■■□□□ 1.36
FAM239A-202ENST00000438107 HOXC9P31274 260 aa23.54■■□□□ 1.36
FAM239A-202ENST00000438107 THEMISQ8N1K5 641 aaPredicted RBP23.54■■□□□ 1.36
FAM239A-202ENST00000438107 DNAJC5Q9H3Z4 198 aa23.54■■□□□ 1.36
FAM239A-202ENST00000438107 TAF7Q15545 349 aaPredicted RBP23.53■■□□□ 1.36
FAM239A-202ENST00000438107 INTS4Q96HW7 963 aaKnown RBP23.53■■□□□ 1.36
FAM239A-202ENST00000438107 PRPF40AO75400 957 aaKnown RBP23.52■■□□□ 1.36
FAM239A-202ENST00000438107 NCLP19338 710 aaKnown RBP23.52■■□□□ 1.36
FAM239A-202ENST00000438107 NLRP6P59044 892 aa23.52■■□□□ 1.36
FAM239A-202ENST00000438107 IL17REQ8NFR9 667 aa23.51■■□□□ 1.35
FAM239A-202ENST00000438107 LRRFIP2Q9Y608 721 aaKnown RBP23.51■■□□□ 1.35
FAM239A-202ENST00000438107 GPT2Q8TD30 523 aa23.5■■□□□ 1.35
FAM239A-202ENST00000438107 SSH3Q8TE77 659 aa23.5■■□□□ 1.35
FAM239A-202ENST00000438107 USP44Q9H0E7 712 aa23.5■■□□□ 1.35
FAM239A-202ENST00000438107 TRIM6-TRIM34B2RNG4 842 aa23.49■■□□□ 1.35
FAM239A-202ENST00000438107 RAB11FIP3O75154 756 aa23.49■■□□□ 1.35
FAM239A-202ENST00000438107 BRD1O95696 1058 aa23.49■■□□□ 1.35
FAM239A-202ENST00000438107 UBTFL1P0CB47 393 aaPredicted RBP23.49■■□□□ 1.35
FAM239A-202ENST00000438107 HS1BP3Q53T59 392 aa23.49■■□□□ 1.35
FAM239A-202ENST00000438107 TSHZ3Q63HK5 1081 aa23.49■■□□□ 1.35
FAM239A-202ENST00000438107 RILPL2Q969X0 211 aa23.49■■□□□ 1.35
FAM239A-202ENST00000438107 MBD3O95983 291 aa23.48■■□□□ 1.35
FAM239A-202ENST00000438107 ZSCAN30Q86W11 494 aa23.48■■□□□ 1.35
FAM239A-202ENST00000438107 ANO2Q9NQ90 1003 aa23.48■■□□□ 1.35
FAM239A-202ENST00000438107 MED1Q15648 1581 aaPredicted RBP23.47■■□□□ 1.35
FAM239A-202ENST00000438107 PALD1Q9ULE6 856 aa23.47■■□□□ 1.35
FAM239A-202ENST00000438107 LTN1O94822 1766 aa23.46■■□□□ 1.35
FAM239A-202ENST00000438107 NECTIN2Q92692 538 aa23.45■■□□□ 1.35
FAM239A-202ENST00000438107 CHMP4AQ9BY43 222 aa23.45■■□□□ 1.35
FAM239A-202ENST00000438107 KDM3BQ7LBC6 1761 aa23.45■■□□□ 1.35
FAM239A-202ENST00000438107 POLA2Q14181 598 aa23.45■■□□□ 1.34
FAM239A-202ENST00000438107 HDGFL1Q5TGJ6 251 aa23.45■■□□□ 1.34
FAM239A-202ENST00000438107 LRSAM1Q6UWE0 723 aa23.45■■□□□ 1.34
FAM239A-202ENST00000438107 RBSNQ9H1K0 784 aa23.45■■□□□ 1.34
FAM239A-202ENST00000438107 CEMIPQ8WUJ3 1361 aa23.44■■□□□ 1.34
FAM239A-202ENST00000438107 PDLIM2Q96JY6 352 aa23.44■■□□□ 1.34
FAM239A-202ENST00000438107 PRIM1P49642 420 aaKnown RBP23.44■■□□□ 1.34
FAM239A-202ENST00000438107 HOXB7P09629 217 aa23.43■■□□□ 1.34
FAM239A-202ENST00000438107 UNC5CLQ8IV45 518 aa23.42■■□□□ 1.34
FAM239A-202ENST00000438107 KCNA6P17658 529 aa23.42■■□□□ 1.34
FAM239A-202ENST00000438107 HSPA4P34932 840 aa23.42■■□□□ 1.34
FAM239A-202ENST00000438107 TMEM63CQ9P1W3 806 aa23.42■■□□□ 1.34
FAM239A-202ENST00000438107 CRYBG1Q9Y4K1 1723 aa23.41■■□□□ 1.34
FAM239A-202ENST00000438107 RBM27Q9P2N5 1060 aaKnown RBP23.41■■□□□ 1.34
FAM239A-202ENST00000438107 ABTB2Q8N961 1025 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms