RNA–Protein interactions for RNA: ENST00000437999.5

CCDC93-203, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-203ENST00000437999 PCDHGC3Q9UN70 934 aa7.77□□□□□ -1.17
CCDC93-203ENST00000437999 TMEM131LA2VDJ0 1609 aa7.77□□□□□ -1.17
CCDC93-203ENST00000437999 SPHKAPQ2M3C7 1700 aa7.76□□□□□ -1.17
CCDC93-203ENST00000437999 PKDCCQ504Y2 493 aa7.76□□□□□ -1.17
CCDC93-203ENST00000437999 THAP11Q96EK4 314 aa7.76□□□□□ -1.17
CCDC93-203ENST00000437999 CPS1P31327 1500 aa7.76□□□□□ -1.17
CCDC93-203ENST00000437999 STRCP1A6NGW2 1772 aa7.76□□□□□ -1.17
CCDC93-203ENST00000437999 DGAT1O75907 488 aa7.75□□□□□ -1.17
CCDC93-203ENST00000437999 FMNL1O95466 1100 aaPredicted RBP7.75□□□□□ -1.17
CCDC93-203ENST00000437999 ZNF697Q5TEC3 545 aa7.75□□□□□ -1.17
CCDC93-203ENST00000437999 PRPF38BQ5VTL8 546 aaKnown RBP7.75□□□□□ -1.17
CCDC93-203ENST00000437999 BRICD5Q6PL45 260 aa7.75□□□□□ -1.17
CCDC93-203ENST00000437999 RNF19BQ6ZMZ0 732 aa7.75□□□□□ -1.17
CCDC93-203ENST00000437999 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.75□□□□□ -1.17
CCDC93-203ENST00000437999 PCDHB15Q9Y5E8 787 aa7.75□□□□□ -1.17
CCDC93-203ENST00000437999 ZFYVE9O95405 1425 aa7.75□□□□□ -1.17
CCDC93-203ENST00000437999 RIMS2Q9UQ26 1411 aa7.75□□□□□ -1.17
CCDC93-203ENST00000437999 PRR20EP86478 221 aa7.74□□□□□ -1.17
CCDC93-203ENST00000437999 PRR20CP86479 221 aa7.74□□□□□ -1.17
CCDC93-203ENST00000437999 PRR20DP86480 221 aa7.74□□□□□ -1.17
CCDC93-203ENST00000437999 PRR20BP86481 221 aa7.74□□□□□ -1.17
CCDC93-203ENST00000437999 PRR20AP86496 221 aa7.74□□□□□ -1.17
CCDC93-203ENST00000437999 NUTM2DQ5VT03 806 aaPredicted RBP7.74□□□□□ -1.17
CCDC93-203ENST00000437999 PCMTD1Q96MG8 357 aaPredicted RBP7.74□□□□□ -1.17
CCDC93-203ENST00000437999 SLC26A8Q96RN1 970 aa7.74□□□□□ -1.17
CCDC93-203ENST00000437999 SPSB2Q99619 263 aa7.74□□□□□ -1.17
CCDC93-203ENST00000437999 UBAP1LF5GYI3 381 aa7.73□□□□□ -1.17
CCDC93-203ENST00000437999 PPP1R15AO75807 674 aaPredicted RBP7.73□□□□□ -1.17
CCDC93-203ENST00000437999 MTMR2Q13614 643 aa7.73□□□□□ -1.17
CCDC93-203ENST00000437999 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.73□□□□□ -1.17
CCDC93-203ENST00000437999 ARID3AQ99856 593 aa7.73□□□□□ -1.17
CCDC93-203ENST00000437999 ZBTB3Q9H5J0 574 aa7.73□□□□□ -1.17
CCDC93-203ENST00000437999 CLTCL1P53675 1640 aa7.73□□□□□ -1.17
CCDC93-203ENST00000437999 TRPM2O94759 1503 aa7.73□□□□□ -1.17
CCDC93-203ENST00000437999 LRRC7Q96NW7 1537 aa7.73□□□□□ -1.17
CCDC93-203ENST00000437999 PLEKHG1Q9ULL1 1385 aa7.72□□□□□ -1.17
CCDC93-203ENST00000437999 SETD5Q9C0A6 1442 aa7.72□□□□□ -1.17
CCDC93-203ENST00000437999 SPDYE5A6NIY4 337 aa7.72□□□□□ -1.17
CCDC93-203ENST00000437999 C6orf229H3BNL8 230 aa7.72□□□□□ -1.17
CCDC93-203ENST00000437999 LILRB3O75022 631 aa7.72□□□□□ -1.17
CCDC93-203ENST00000437999 ZNF326Q5BKZ1 582 aaKnown RBP7.72□□□□□ -1.17
CCDC93-203ENST00000437999 PROCA1Q8NCQ7 364 aaPredicted RBP7.72□□□□□ -1.17
CCDC93-203ENST00000437999 MPHOSPH9Q99550 1183 aa7.72□□□□□ -1.17
CCDC93-203ENST00000437999 KIF1BO60333 1816 aa7.71□□□□□ -1.17
CCDC93-203ENST00000437999 GDF9O60383 454 aa7.71□□□□□ -1.18
CCDC93-203ENST00000437999 TOM1O60784 492 aa7.71□□□□□ -1.18
CCDC93-203ENST00000437999 KCNA6P17658 529 aa7.71□□□□□ -1.18
CCDC93-203ENST00000437999 MYT1Q01538 1121 aa7.71□□□□□ -1.18
CCDC93-203ENST00000437999 CSPP1Q1MSJ5 1256 aa7.71□□□□□ -1.18
CCDC93-203ENST00000437999 RETREG3Q86VR2 466 aa7.71□□□□□ -1.18
CCDC93-203ENST00000437999 SYMPKQ92797 1274 aaKnown RBP7.71□□□□□ -1.18
CCDC93-203ENST00000437999 USB1Q9BQ65 265 aaKnown RBP7.71□□□□□ -1.18
CCDC93-203ENST00000437999 TNFRSF10AO00220 468 aa7.7□□□□□ -1.18
CCDC93-203ENST00000437999 PIP4K2BP78356 416 aa7.7□□□□□ -1.18
CCDC93-203ENST00000437999 QPCTQ16769 361 aa7.7□□□□□ -1.18
CCDC93-203ENST00000437999 MSS51Q4VC12 460 aa7.7□□□□□ -1.18
CCDC93-203ENST00000437999 CABLES1Q8TDN4 633 aa7.7□□□□□ -1.18
CCDC93-203ENST00000437999 TBX22Q9Y458 520 aa7.7□□□□□ -1.18
CCDC93-203ENST00000437999 XIRP1Q702N8 1843 aaKnown RBP7.7□□□□□ -1.18
CCDC93-203ENST00000437999 RAB3GAP2Q9H2M9 1393 aa7.7□□□□□ -1.18
CCDC93-203ENST00000437999 ADAMTS13Q76LX8 1427 aa7.69□□□□□ -1.18
CCDC93-203ENST00000437999 CHD2O14647 1828 aaKnown RBP7.69□□□□□ -1.18
CCDC93-203ENST00000437999 FAM187AA6NFU0 413 aa7.69□□□□□ -1.18
CCDC93-203ENST00000437999 NUTM2BA6NNL0 878 aaPredicted RBP7.69□□□□□ -1.18
CCDC93-203ENST00000437999 NUTM2EB1AL46 878 aaPredicted RBP7.69□□□□□ -1.18
CCDC93-203ENST00000437999 PLA2G2CQ5R387 149 aa7.69□□□□□ -1.18
CCDC93-203ENST00000437999 PPP2R2DQ66LE6 453 aa7.69□□□□□ -1.18
CCDC93-203ENST00000437999 NUTM2AQ8IVF1 878 aaPredicted RBP7.69□□□□□ -1.18
CCDC93-203ENST00000437999 FAM160A2Q8N612 972 aaPredicted RBP7.69□□□□□ -1.18
CCDC93-203ENST00000437999 ACIN1Q9UKV3 1341 aaKnown RBP7.69□□□□□ -1.18
CCDC93-203ENST00000437999 NWD1Q149M9 1564 aa7.68□□□□□ -1.18
CCDC93-203ENST00000437999 ALKQ9UM73 1620 aa7.68□□□□□ -1.18
CCDC93-203ENST00000437999 CD2BP2O95400 341 aaKnown RBP7.68□□□□□ -1.18
CCDC93-203ENST00000437999 PROSER2Q86WR7 435 aaPredicted RBP7.68□□□□□ -1.18
CCDC93-203ENST00000437999 ZNF775Q96BV0 537 aaPredicted RBP7.68□□□□□ -1.18
CCDC93-203ENST00000437999 TMEM94Q12767 1356 aa7.68□□□□□ -1.18
CCDC93-203ENST00000437999 NEXMIFQ5QGS0 1516 aa7.68□□□□□ -1.18
CCDC93-203ENST00000437999 RPIAP49247 311 aa7.67□□□□□ -1.18
CCDC93-203ENST00000437999 FOXC1Q12948 553 aa7.67□□□□□ -1.18
CCDC93-203ENST00000437999 RTL5Q5HYW3 569 aaPredicted RBP7.67□□□□□ -1.18
CCDC93-203ENST00000437999 PRR7Q8TB68 274 aa7.67□□□□□ -1.18
CCDC93-203ENST00000437999 DIP2AQ14689 1571 aa7.67□□□□□ -1.18
CCDC93-203ENST00000437999 NRXN3Q9Y4C0 1643 aa7.67□□□□□ -1.18
CCDC93-203ENST00000437999 MMP16P51512 607 aa7.66□□□□□ -1.18
CCDC93-203ENST00000437999 DESI1Q6ICB0 168 aa7.66□□□□□ -1.18
CCDC93-203ENST00000437999 AMOTL2Q9Y2J4 779 aa7.66□□□□□ -1.18
CCDC93-203ENST00000437999 PIK3R4Q99570 1358 aa7.66□□□□□ -1.18
CCDC93-203ENST00000437999 CCDC144AA2RUR9 1427 aa7.66□□□□□ -1.18
CCDC93-203ENST00000437999 NKTRP30414 1462 aaKnown RBP7.66□□□□□ -1.18
CCDC93-203ENST00000437999 SETBP1Q9Y6X0 1596 aa7.66□□□□□ -1.18
CCDC93-203ENST00000437999 CFAP99D6REC4 459 aa7.65□□□□□ -1.18
CCDC93-203ENST00000437999 PPLO60437 1756 aa7.65□□□□□ -1.18
CCDC93-203ENST00000437999 DXOO77932 396 aaKnown RBP7.65□□□□□ -1.18
CCDC93-203ENST00000437999 HSPA1LP34931 641 aa7.65□□□□□ -1.18
CCDC93-203ENST00000437999 RFC5P40937 340 aa7.65□□□□□ -1.18
CCDC93-203ENST00000437999 RGL3Q3MIN7 710 aa7.65□□□□□ -1.18
CCDC93-203ENST00000437999 RPGRIP1LQ68CZ1 1315 aa7.65□□□□□ -1.18
CCDC93-203ENST00000437999 PTPRUQ92729 1446 aa7.65□□□□□ -1.18
CCDC93-203ENST00000437999 PRDM9Q9NQV7 894 aa7.65□□□□□ -1.18
CCDC93-203ENST00000437999 SPATA31E1Q6ZUB1 1445 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms