RNA–Protein interactions for RNA: ENST00000437892.1

LINC00858-202, long intergenic non-protein coding RNA 858, humanhuman

TSL 3

Gene LINC00858, Length 674 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00858-202ENST00000437892 COL14A1Q05707 1796 aaKnown RBP12.33□□□□□ -0.44
LINC00858-202ENST00000437892 CHRM1P11229 460 aaPredicted RBP12.32□□□□□ -0.44
LINC00858-202ENST00000437892 MS4A1P11836 297 aa12.32□□□□□ -0.44
LINC00858-202ENST00000437892 PLEKHO1Q53GL0 409 aaPredicted RBP12.32□□□□□ -0.44
LINC00858-202ENST00000437892 C20orf194Q5TEA3 1177 aa12.32□□□□□ -0.44
LINC00858-202ENST00000437892 USHBP1Q8N6Y0 703 aa12.32□□□□□ -0.44
LINC00858-202ENST00000437892 MEGF6O75095 1541 aa12.32□□□□□ -0.44
LINC00858-202ENST00000437892 KDM3BQ7LBC6 1761 aa12.31□□□□□ -0.44
LINC00858-202ENST00000437892 ZBTB7CA1YPR0 619 aa12.31□□□□□ -0.44
LINC00858-202ENST00000437892 DCTN1Q14203 1278 aa12.31□□□□□ -0.44
LINC00858-202ENST00000437892 AKAP4Q5JQC9 854 aa12.31□□□□□ -0.44
LINC00858-202ENST00000437892 MCM10Q7L590 875 aa12.31□□□□□ -0.44
LINC00858-202ENST00000437892 CABLES1Q8TDN4 633 aa12.31□□□□□ -0.44
LINC00858-202ENST00000437892 SSH1Q8WYL5 1049 aa12.31□□□□□ -0.44
LINC00858-202ENST00000437892 CRBNQ96SW2 442 aa12.31□□□□□ -0.44
LINC00858-202ENST00000437892 SMC4Q9NTJ3 1288 aa12.31□□□□□ -0.44
LINC00858-202ENST00000437892 MRC1P22897 1456 aa12.31□□□□□ -0.44
LINC00858-202ENST00000437892 WDR17Q8IZU2 1322 aa12.31□□□□□ -0.44
LINC00858-202ENST00000437892 PHLPP1O60346 1717 aa12.31□□□□□ -0.44
LINC00858-202ENST00000437892 PLCH1Q4KWH8 1693 aa12.3□□□□□ -0.44
LINC00858-202ENST00000437892 VAMP4O75379 141 aa12.3□□□□□ -0.44
LINC00858-202ENST00000437892 IFNL1Q8IU54 200 aa12.3□□□□□ -0.44
LINC00858-202ENST00000437892 CCDC136Q96JN2 1154 aa12.3□□□□□ -0.44
LINC00858-202ENST00000437892 SGIP1Q9BQI5 828 aa12.3□□□□□ -0.44
LINC00858-202ENST00000437892 PRDM11Q9NQV5 511 aa12.3□□□□□ -0.44
LINC00858-202ENST00000437892 SIPA1L3O60292 1781 aaPredicted RBP12.3□□□□□ -0.44
LINC00858-202ENST00000437892 CANXP27824 592 aaKnown RBP12.29□□□□□ -0.44
LINC00858-202ENST00000437892 TWISTNBQ3B726 338 aaPredicted RBP12.29□□□□□ -0.44
LINC00858-202ENST00000437892 ZKSCAN2Q63HK3 967 aa12.29□□□□□ -0.44
LINC00858-202ENST00000437892 ARHGAP45Q92619 1136 aa12.29□□□□□ -0.44
LINC00858-202ENST00000437892 IPO8O15397 1037 aaKnown RBP12.28□□□□□ -0.44
LINC00858-202ENST00000437892 B4GALNT3Q6L9W6 998 aa12.28□□□□□ -0.44
LINC00858-202ENST00000437892 ZNF530Q6P9A1 599 aaPredicted RBP12.28□□□□□ -0.44
LINC00858-202ENST00000437892 IL17REQ8NFR9 667 aa12.28□□□□□ -0.44
LINC00858-202ENST00000437892 RAPGEF4Q8WZA2 1011 aa12.28□□□□□ -0.44
LINC00858-202ENST00000437892 CIZ1Q9ULV3 898 aaPredicted RBP12.28□□□□□ -0.44
LINC00858-202ENST00000437892 LAS1LQ9Y4W2 734 aaKnown RBP12.28□□□□□ -0.44
LINC00858-202ENST00000437892 CHRNA2Q15822 529 aa12.27□□□□□ -0.45
LINC00858-202ENST00000437892 ATF7IPQ6VMQ6 1270 aa12.27□□□□□ -0.45
LINC00858-202ENST00000437892 C8orf58Q8NAV2 365 aa12.27□□□□□ -0.45
LINC00858-202ENST00000437892 NLRP2Q9NX02 1062 aa12.27□□□□□ -0.45
LINC00858-202ENST00000437892 TSPYL4Q9UJ04 414 aa12.27□□□□□ -0.45
LINC00858-202ENST00000437892 PCDHB13Q9Y5F0 798 aa12.27□□□□□ -0.45
LINC00858-202ENST00000437892 SCN11AQ9UI33 1791 aa12.26□□□□□ -0.45
LINC00858-202ENST00000437892 VIRMAQ69YN4 1812 aaKnown RBP12.26□□□□□ -0.45
LINC00858-202ENST00000437892 TOM1O60784 492 aa12.26□□□□□ -0.45
LINC00858-202ENST00000437892 TRIM27P14373 513 aa12.26□□□□□ -0.45
LINC00858-202ENST00000437892 TATP17735 454 aaPredicted RBP12.26□□□□□ -0.45
LINC00858-202ENST00000437892 TAF7Q15545 349 aaPredicted RBP12.26□□□□□ -0.45
LINC00858-202ENST00000437892 C1orf141Q5JVX7 400 aa12.26□□□□□ -0.45
LINC00858-202ENST00000437892 MRPL50Q8N5N7 158 aaKnown RBP12.26□□□□□ -0.45
LINC00858-202ENST00000437892 TSPYL6Q8N831 410 aa12.26□□□□□ -0.45
LINC00858-202ENST00000437892 BCL2L13Q9BXK5 485 aa12.26□□□□□ -0.45
LINC00858-202ENST00000437892 SPG7Q9UQ90 795 aa12.26□□□□□ -0.45
LINC00858-202ENST00000437892 HOXB7P09629 217 aa12.25□□□□□ -0.45
LINC00858-202ENST00000437892 CSB-PGBD3P0DP91 1061 aa12.25□□□□□ -0.45
LINC00858-202ENST00000437892 DZIP1LQ8IYY4 767 aaKnown RBP12.25□□□□□ -0.45
LINC00858-202ENST00000437892 FRAT1Q92837 279 aaPredicted RBP12.25□□□□□ -0.45
LINC00858-202ENST00000437892 CARD10Q9BWT7 1032 aa12.25□□□□□ -0.45
LINC00858-202ENST00000437892 KDM6AO15550 1401 aaPredicted RBP12.25□□□□□ -0.45
LINC00858-202ENST00000437892 ABCC4O15439 1325 aa12.24□□□□□ -0.45
LINC00858-202ENST00000437892 RNMTO43148 476 aaKnown RBP12.24□□□□□ -0.45
LINC00858-202ENST00000437892 RLBP1P12271 317 aa12.24□□□□□ -0.45
LINC00858-202ENST00000437892 MVPQ14764 893 aaKnown RBP12.24□□□□□ -0.45
LINC00858-202ENST00000437892 NRAPQ86VF7 1730 aa12.24□□□□□ -0.45
LINC00858-202ENST00000437892 FTSJ3Q8IY81 847 aaKnown RBP12.24□□□□□ -0.45
LINC00858-202ENST00000437892 KDM2BQ8NHM5 1336 aa12.24□□□□□ -0.45
LINC00858-202ENST00000437892 PANK1Q8TE04 598 aa12.24□□□□□ -0.45
LINC00858-202ENST00000437892 CLUAP1Q96AJ1 413 aa12.24□□□□□ -0.45
LINC00858-202ENST00000437892 SHANK3Q9BYB0 1731 aa12.24□□□□□ -0.45
LINC00858-202ENST00000437892 WNK3Q9BYP7 1800 aa12.23□□□□□ -0.45
LINC00858-202ENST00000437892 RGS12O14924 1447 aa12.23□□□□□ -0.45
LINC00858-202ENST00000437892 PTPRCP08575 1304 aa12.23□□□□□ -0.45
LINC00858-202ENST00000437892 ASTLQ6HA08 431 aaPredicted RBP12.23□□□□□ -0.45
LINC00858-202ENST00000437892 CHMP4AQ9BY43 222 aa12.23□□□□□ -0.45
LINC00858-202ENST00000437892 PCDHB8Q9UN66 801 aa12.23□□□□□ -0.45
LINC00858-202ENST00000437892 N4BP2Q86UW6 1770 aaPredicted RBP12.23□□□□□ -0.45
LINC00858-202ENST00000437892 NWD2Q9ULI1 1742 aa12.23□□□□□ -0.45
LINC00858-202ENST00000437892 DISP2A7MBM2 1401 aa12.22□□□□□ -0.45
LINC00858-202ENST00000437892 HEG1Q9ULI3 1381 aa12.22□□□□□ -0.45
LINC00858-202ENST00000437892 PCDH11XQ9BZA7 1347 aa12.22□□□□□ -0.45
LINC00858-202ENST00000437892 PCDH11YQ9BZA8 1340 aa12.22□□□□□ -0.45
LINC00858-202ENST00000437892 ATMINO43313 823 aaPredicted RBP12.22□□□□□ -0.45
LINC00858-202ENST00000437892 HSP90AB1P08238 724 aaKnown RBP12.22□□□□□ -0.45
LINC00858-202ENST00000437892 PHKG2P15735 406 aa12.22□□□□□ -0.45
LINC00858-202ENST00000437892 CENPQQ7L2Z9 268 aaPredicted RBP12.22□□□□□ -0.45
LINC00858-202ENST00000437892 API5Q9BZZ5 524 aaKnown RBP12.22□□□□□ -0.45
LINC00858-202ENST00000437892 BMP2KQ9NSY1 1161 aaPredicted RBP12.22□□□□□ -0.45
LINC00858-202ENST00000437892 NOB1Q9ULX3 412 aaKnown RBP12.22□□□□□ -0.45
LINC00858-202ENST00000437892 DDX19BQ9UMR2 479 aa12.22□□□□□ -0.45
LINC00858-202ENST00000437892 PXDNLA1KZ92 1463 aa12.21□□□□□ -0.45
LINC00858-202ENST00000437892 TEFQ10587 303 aa12.21□□□□□ -0.45
LINC00858-202ENST00000437892 IFNL2Q8IZJ0 200 aa12.21□□□□□ -0.45
LINC00858-202ENST00000437892 DCAF5Q96JK2 942 aa12.21□□□□□ -0.45
LINC00858-202ENST00000437892 CHMP4BQ9H444 224 aaKnown RBP12.21□□□□□ -0.45
LINC00858-202ENST00000437892 COG6Q9Y2V7 657 aa12.21□□□□□ -0.45
LINC00858-202ENST00000437892 LRP6O75581 1613 aa12.21□□□□□ -0.46
LINC00858-202ENST00000437892 CACNA1FO60840 1977 aa12.2□□□□□ -0.46
LINC00858-202ENST00000437892 PAPPAQ13219 1627 aa12.2□□□□□ -0.46
LINC00858-202ENST00000437892 TOM1L2Q6ZVM7 507 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms