RNA–Protein interactions for RNA: ENST00000437302.5

ITGB1-206, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-206ENST00000437302 KIFC2Q96AC6 838 aa6.38□□□□□ -1.39
ITGB1-206ENST00000437302 SLC4A9Q96Q91 983 aa6.38□□□□□ -1.39
ITGB1-206ENST00000437302 INSM2Q96T92 566 aaPredicted RBP6.38□□□□□ -1.39
ITGB1-206ENST00000437302 M0R2N6 131 aa6.37□□□□□ -1.39
ITGB1-206ENST00000437302 STAU1O95793 577 aaKnown RBP6.37□□□□□ -1.39
ITGB1-206ENST00000437302 CTSOP43234 321 aaPredicted RBP6.37□□□□□ -1.39
ITGB1-206ENST00000437302 PSME1Q06323 249 aa6.37□□□□□ -1.39
ITGB1-206ENST00000437302 CCDC102BQ68D86 513 aa6.37□□□□□ -1.39
ITGB1-206ENST00000437302 TPCN2Q8NHX9 752 aa6.37□□□□□ -1.39
ITGB1-206ENST00000437302 ZNF594Q96JF6 807 aaPredicted RBP6.37□□□□□ -1.39
ITGB1-206ENST00000437302 RAB6BQ9NRW1 208 aa6.37□□□□□ -1.39
ITGB1-206ENST00000437302 GMPR2Q9P2T1 348 aaKnown RBP6.37□□□□□ -1.39
ITGB1-206ENST00000437302 TTLL8A6PVC2 850 aa6.36□□□□□ -1.39
ITGB1-206ENST00000437302 MEN1O00255 615 aa6.36□□□□□ -1.39
ITGB1-206ENST00000437302 FOXD4L5Q5VV16 416 aaPredicted RBP6.36□□□□□ -1.39
ITGB1-206ENST00000437302 ANKMY2Q8IV38 441 aa6.36□□□□□ -1.39
ITGB1-206ENST00000437302 RNF217Q8TC41 542 aa6.36□□□□□ -1.39
ITGB1-206ENST00000437302 NLRP3Q96P20 1036 aa6.36□□□□□ -1.39
ITGB1-206ENST00000437302 FHDC1Q9C0D6 1143 aaPredicted RBP6.36□□□□□ -1.39
ITGB1-206ENST00000437302 GRIP2Q9C0E4 1043 aa6.36□□□□□ -1.39
ITGB1-206ENST00000437302 ZNF358Q9NW07 568 aa6.36□□□□□ -1.39
ITGB1-206ENST00000437302 BACH1O14867 736 aa6.35□□□□□ -1.39
ITGB1-206ENST00000437302 EPHA4P54764 986 aa6.35□□□□□ -1.39
ITGB1-206ENST00000437302 CENPCQ03188 943 aa6.35□□□□□ -1.39
ITGB1-206ENST00000437302 MTFR1Q15390 333 aa6.35□□□□□ -1.39
ITGB1-206ENST00000437302 CDCA8Q53HL2 280 aa6.35□□□□□ -1.39
ITGB1-206ENST00000437302 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.35□□□□□ -1.39
ITGB1-206ENST00000437302 POLMQ9NP87 494 aaPredicted RBP6.35□□□□□ -1.39
ITGB1-206ENST00000437302 POTECB2RU33 542 aa6.34□□□□□ -1.39
ITGB1-206ENST00000437302 SMTNP53814 917 aa6.34□□□□□ -1.39
ITGB1-206ENST00000437302 SEC13P55735 322 aa6.34□□□□□ -1.39
ITGB1-206ENST00000437302 DPYDQ12882 1025 aa6.34□□□□□ -1.39
ITGB1-206ENST00000437302 DNMT3LQ9UJW3 386 aa6.34□□□□□ -1.39
ITGB1-206ENST00000437302 ZMIZ1Q9ULJ6 1067 aa6.34□□□□□ -1.39
ITGB1-206ENST00000437302 NOVA2Q9UNW9 492 aaKnown RBP6.34□□□□□ -1.39
ITGB1-206ENST00000437302 RBM19Q9Y4C8 960 aaKnown RBP6.34□□□□□ -1.39
ITGB1-206ENST00000437302 A6NJY4 79 aa6.33□□□□□ -1.4
ITGB1-206ENST00000437302 SPATA31C2B4DYI2 1134 aa6.33□□□□□ -1.4
ITGB1-206ENST00000437302 C11orf95C9JLR9 678 aaPredicted RBP6.33□□□□□ -1.4
ITGB1-206ENST00000437302 SNRPBP14678 240 aaKnown RBP6.33□□□□□ -1.4
ITGB1-206ENST00000437302 TLR1Q15399 786 aa6.33□□□□□ -1.4
ITGB1-206ENST00000437302 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.33□□□□□ -1.45e-6■□□□□ 10.3
ITGB1-206ENST00000437302 PPARGC1BQ86YN6 1023 aaKnown RBP6.33□□□□□ -1.4
ITGB1-206ENST00000437302 FAM200AQ8TCP9 573 aa6.33□□□□□ -1.4
ITGB1-206ENST00000437302 IQSEC3Q9UPP2 1182 aaPredicted RBP6.33□□□□□ -1.4
ITGB1-206ENST00000437302 SFI1A8K8P3 1242 aa6.32□□□□□ -1.4
ITGB1-206ENST00000437302 CDK2AP1O14519 115 aa6.32□□□□□ -1.4
ITGB1-206ENST00000437302 MAN1A2O60476 641 aa6.32□□□□□ -1.4
ITGB1-206ENST00000437302 FOXK2Q01167 660 aa6.32□□□□□ -1.4
ITGB1-206ENST00000437302 WDR44Q5JSH3 913 aa6.32□□□□□ -1.4
ITGB1-206ENST00000437302 SLC27A3Q5K4L6 730 aa6.32□□□□□ -1.4
ITGB1-206ENST00000437302 ZNF295-AS1Q8N0V1 137 aa6.32□□□□□ -1.4
ITGB1-206ENST00000437302 ZSCAN10Q96SZ4 725 aaPredicted RBP6.32□□□□□ -1.4
ITGB1-206ENST00000437302 SCHIP1Q9P0W5 487 aaPredicted RBP6.32□□□□□ -1.4
ITGB1-206ENST00000437302 SERTAD1Q9UHV2 236 aa6.32□□□□□ -1.4
ITGB1-206ENST00000437302 ACIN1Q9UKV3 1341 aaKnown RBP6.31□□□□□ -1.4
ITGB1-206ENST00000437302 FAM69CQ0P6D2 419 aa6.31□□□□□ -1.4
ITGB1-206ENST00000437302 SWI5Q1ZZU3 235 aa6.31□□□□□ -1.4
ITGB1-206ENST00000437302 LYSMD3Q7Z3D4 306 aa6.31□□□□□ -1.4
ITGB1-206ENST00000437302 TSEN2Q8NCE0 465 aaKnown RBP6.31□□□□□ -1.4
ITGB1-206ENST00000437302 FIGNL2A6NMB9 653 aa6.3□□□□□ -1.4
ITGB1-206ENST00000437302 PDIA4P13667 645 aaKnown RBP6.3□□□□□ -1.4
ITGB1-206ENST00000437302 TNS4Q8IZW8 715 aa6.3□□□□□ -1.4
ITGB1-206ENST00000437302 NBPF15Q8N660 670 aa6.3□□□□□ -1.4
ITGB1-206ENST00000437302 RHBDD1Q8TEB9 315 aa6.3□□□□□ -1.4
ITGB1-206ENST00000437302 STK32AQ8WU08 396 aa6.3□□□□□ -1.4
ITGB1-206ENST00000437302 ZBTB7CA1YPR0 619 aa6.29□□□□□ -1.4
ITGB1-206ENST00000437302 SOBPA7XYQ1 873 aa6.29□□□□□ -1.4
ITGB1-206ENST00000437302 TMEM164Q5U3C3 297 aa6.29□□□□□ -1.4
ITGB1-206ENST00000437302 ZNF787Q6DD87 383 aa6.29□□□□□ -1.4
ITGB1-206ENST00000437302 TMEM214Q6NUQ4 689 aaKnown RBP6.29□□□□□ -1.4
ITGB1-206ENST00000437302 NBPF10Q6P3W6 841 aaKnown RBP6.29□□□□□ -1.4
ITGB1-206ENST00000437302 POTEAQ6S8J7 498 aa6.29□□□□□ -1.4
ITGB1-206ENST00000437302 TAS1R3Q7RTX0 852 aa6.29□□□□□ -1.4
ITGB1-206ENST00000437302 PRICKLE2Q7Z3G6 844 aa6.29□□□□□ -1.4
ITGB1-206ENST00000437302 SENP3-EIF4A1A0A087X0R7 540 aa6.28□□□□□ -1.4
ITGB1-206ENST00000437302 TMEM88BA6NKF7 163 aa6.28□□□□□ -1.4
ITGB1-206ENST00000437302 GTF2E1P29083 439 aaPredicted RBP6.28□□□□□ -1.4
ITGB1-206ENST00000437302 C4orf17Q53FE4 359 aa6.28□□□□□ -1.4
ITGB1-206ENST00000437302 GNASQ5JWF2 1037 aa6.28□□□□□ -1.4
ITGB1-206ENST00000437302 STAG2Q8N3U4 1231 aa6.28□□□□□ -1.4
ITGB1-206ENST00000437302 GAS2L2Q8NHY3 880 aa6.28□□□□□ -1.4
ITGB1-206ENST00000437302 NIFKQ9BYG3 293 aaKnown RBP6.28□□□□□ -1.4
ITGB1-206ENST00000437302 TSPAN10Q9H1Z9 355 aaPredicted RBP6.28□□□□□ -1.4
ITGB1-206ENST00000437302 CCDC9Q9Y3X0 531 aaKnown RBP6.28□□□□□ -1.4
ITGB1-206ENST00000437302 USP3Q9Y6I4 520 aa6.28□□□□□ -1.4
ITGB1-206ENST00000437302 C21orf2O43822 256 aa6.27□□□□□ -1.41
ITGB1-206ENST00000437302 CSB-PGBD3P0DP91 1061 aa6.27□□□□□ -1.41
ITGB1-206ENST00000437302 WEE1P30291 646 aa6.27□□□□□ -1.41
ITGB1-206ENST00000437302 PTSQ03393 145 aa6.27□□□□□ -1.41
ITGB1-206ENST00000437302 POU4F2Q12837 409 aa6.27□□□□□ -1.41
ITGB1-206ENST00000437302 TEAD4Q15561 434 aa6.27□□□□□ -1.41
ITGB1-206ENST00000437302 SLC9A9Q8IVB4 645 aa6.27□□□□□ -1.41
ITGB1-206ENST00000437302 CLP1Q92989 425 aaKnown RBP6.27□□□□□ -1.41
ITGB1-206ENST00000437302 HINFPQ9BQA5 517 aa6.27□□□□□ -1.41
ITGB1-206ENST00000437302 USTQ9Y2C2 406 aa6.27□□□□□ -1.41
ITGB1-206ENST00000437302 SLC35F4A4IF30 521 aa6.26□□□□□ -1.41
ITGB1-206ENST00000437302 IGFBP4P22692 258 aa6.26□□□□□ -1.41
ITGB1-206ENST00000437302 HIRAP54198 1017 aaPredicted RBP6.26□□□□□ -1.41
ITGB1-206ENST00000437302 PSMA6P60900 246 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms