RNA–Protein interactions for RNA: ENST00000437103.1

TOP3B-207, Transcript of DNA topoisomerase III beta, humanhuman

TSL 4

Gene TOP3B, Length 571 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-207ENST00000437103 U2AF1L5P0DN76 240 aaPredicted RBP16.48■□□□□ 0.23
TOP3B-207ENST00000437103 U2AF1Q01081 240 aaKnown RBP eCLIP16.48■□□□□ 0.23
TOP3B-207ENST00000437103 RC3H1Q5TC82 1133 aaKnown RBP16.48■□□□□ 0.23
TOP3B-207ENST00000437103 COL23A1Q86Y22 540 aaPredicted RBP16.48■□□□□ 0.23
TOP3B-207ENST00000437103 AK7Q96M32 723 aa16.48■□□□□ 0.23
TOP3B-207ENST00000437103 SLC52A2Q9HAB3 445 aa16.48■□□□□ 0.23
TOP3B-207ENST00000437103 LGR6Q9HBX8 967 aa16.48■□□□□ 0.23
TOP3B-207ENST00000437103 CASZ1Q86V15 1759 aa16.48■□□□□ 0.23
TOP3B-207ENST00000437103 GNAT3A8MTJ3 354 aa16.47■□□□□ 0.23
TOP3B-207ENST00000437103 POLD1P28340 1107 aa16.47■□□□□ 0.23
TOP3B-207ENST00000437103 RBM42Q9BTD8 480 aaKnown RBP16.47■□□□□ 0.23
TOP3B-207ENST00000437103 PNNQ9H307 717 aaKnown RBP16.47■□□□□ 0.23
TOP3B-207ENST00000437103 TOGARAM1Q9Y4F4 1720 aa16.47■□□□□ 0.23
TOP3B-207ENST00000437103 DCAF8L1A6NGE4 600 aa16.46■□□□□ 0.23
TOP3B-207ENST00000437103 MSH5O43196 834 aa16.46■□□□□ 0.23
TOP3B-207ENST00000437103 SSFA2P28290 1259 aa16.46■□□□□ 0.23
TOP3B-207ENST00000437103 ARXQ96QS3 562 aa16.46■□□□□ 0.23
TOP3B-207ENST00000437103 RSPH6AQ9H0K4 717 aa16.46■□□□□ 0.23
TOP3B-207ENST00000437103 PRKAR2BP31323 418 aa16.45■□□□□ 0.22
TOP3B-207ENST00000437103 ITPK1Q13572 414 aa16.45■□□□□ 0.22
TOP3B-207ENST00000437103 LINC00116Q8NCU8 138 aa16.45■□□□□ 0.22
TOP3B-207ENST00000437103 NEFMP07197 916 aa16.44■□□□□ 0.22
TOP3B-207ENST00000437103 QSER1Q2KHR3 1735 aa16.43■□□□□ 0.22
TOP3B-207ENST00000437103 HTATSF1O43719 755 aaKnown RBP16.43■□□□□ 0.22
TOP3B-207ENST00000437103 PTCD1O75127 700 aaKnown RBP16.43■□□□□ 0.22
TOP3B-207ENST00000437103 PHACTR3Q96KR7 559 aa16.43■□□□□ 0.22
TOP3B-207ENST00000437103 SLC4A9Q96Q91 983 aa16.43■□□□□ 0.22
TOP3B-207ENST00000437103 SYT17Q9BSW7 474 aa16.43■□□□□ 0.22
TOP3B-207ENST00000437103 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.42■□□□□ 0.22
TOP3B-207ENST00000437103 ADRA2BP18089 450 aa16.42■□□□□ 0.22
TOP3B-207ENST00000437103 TEFQ10587 303 aa16.42■□□□□ 0.22
TOP3B-207ENST00000437103 TRAPPC3LQ5T215 181 aa16.42■□□□□ 0.22
TOP3B-207ENST00000437103 VSIG10Q8N0Z9 540 aa16.42■□□□□ 0.22
TOP3B-207ENST00000437103 IL17REQ8NFR9 667 aa16.42■□□□□ 0.22
TOP3B-207ENST00000437103 RTCBQ9Y3I0 505 aaKnown RBP16.42■□□□□ 0.22
TOP3B-207ENST00000437103 MAP3K5Q99683 1374 aa16.41■□□□□ 0.22
TOP3B-207ENST00000437103 GNPATO15228 680 aa16.41■□□□□ 0.22
TOP3B-207ENST00000437103 RPS6KA4O75676 772 aa16.41■□□□□ 0.22
TOP3B-207ENST00000437103 CNTNAP4Q9C0A0 1308 aa16.41■□□□□ 0.22
TOP3B-207ENST00000437103 RTF1Q92541 710 aaKnown RBP16.4■□□□□ 0.22
TOP3B-207ENST00000437103 FHDC1Q9C0D6 1143 aaPredicted RBP16.4■□□□□ 0.22
TOP3B-207ENST00000437103 C5P01031 1676 aa16.4■□□□□ 0.22
TOP3B-207ENST00000437103 TEX13AQ9BXU3 409 aaPredicted RBP16.39■□□□□ 0.21
TOP3B-207ENST00000437103 ZNF831Q5JPB2 1677 aa16.39■□□□□ 0.21
TOP3B-207ENST00000437103 C4BP0C0L5 1744 aa16.39■□□□□ 0.21
TOP3B-207ENST00000437103 TTC5Q8N0Z6 440 aa16.38■□□□□ 0.21
TOP3B-207ENST00000437103 MYBBP1AQ9BQG0 1328 aaKnown RBP16.38■□□□□ 0.21
TOP3B-207ENST00000437103 CEMIPQ8WUJ3 1361 aa16.38■□□□□ 0.21
TOP3B-207ENST00000437103 SCN11AQ9UI33 1791 aa16.37■□□□□ 0.21
TOP3B-207ENST00000437103 PHF14O94880 888 aa16.37■□□□□ 0.21
TOP3B-207ENST00000437103 ZNF790Q6PG37 636 aa16.37■□□□□ 0.21
TOP3B-207ENST00000437103 NLGN1Q8N2Q7 840 aa16.37■□□□□ 0.21
TOP3B-207ENST00000437103 TAF1LQ8IZX4 1826 aa16.37■□□□□ 0.21
TOP3B-207ENST00000437103 MRC1P22897 1456 aa16.36■□□□□ 0.21
TOP3B-207ENST00000437103 RFC4P35249 363 aa16.36■□□□□ 0.21
TOP3B-207ENST00000437103 CRKLP46109 303 aaKnown RBP16.36■□□□□ 0.21
TOP3B-207ENST00000437103 SLC39A6Q13433 755 aa16.36■□□□□ 0.21
TOP3B-207ENST00000437103 AMIGO3Q86WK7 504 aa16.36■□□□□ 0.21
TOP3B-207ENST00000437103 ARHGEF1Q92888 912 aaKnown RBP16.36■□□□□ 0.21
TOP3B-207ENST00000437103 PLEKHF1Q96S99 279 aa16.36■□□□□ 0.21
TOP3B-207ENST00000437103 BTBD11A6QL63 1104 aa16.35■□□□□ 0.21
TOP3B-207ENST00000437103 STARD3NLO95772 234 aa16.35■□□□□ 0.21
TOP3B-207ENST00000437103 CD2APQ9Y5K6 639 aa16.35■□□□□ 0.21
TOP3B-207ENST00000437103 ADAMTS7Q9UKP4 1686 aa16.34■□□□□ 0.21
TOP3B-207ENST00000437103 CYP19A1P11511 503 aaPredicted RBP16.34■□□□□ 0.21
TOP3B-207ENST00000437103 INTS5Q6P9B9 1019 aaKnown RBP16.34■□□□□ 0.21
TOP3B-207ENST00000437103 PRKRIP1Q9H875 184 aaPredicted RBP16.34■□□□□ 0.21
TOP3B-207ENST00000437103 CCDC87Q9NVE4 849 aa16.34■□□□□ 0.21
TOP3B-207ENST00000437103 MSL1Q68DK7 614 aa16.33■□□□□ 0.2
TOP3B-207ENST00000437103 DNAJC10Q8IXB1 793 aa16.33■□□□□ 0.2
TOP3B-207ENST00000437103 FMNL2Q96PY5 1086 aa16.33■□□□□ 0.2
TOP3B-207ENST00000437103 COL24A1Q17RW2 1714 aa16.33■□□□□ 0.2
TOP3B-207ENST00000437103 TAF7Q15545 349 aaPredicted RBP16.32■□□□□ 0.2
TOP3B-207ENST00000437103 MAPK8IP3Q9UPT6 1336 aa16.31■□□□□ 0.2
TOP3B-207ENST00000437103 ZNF316A6NFI3 1004 aaPredicted RBP16.31■□□□□ 0.2
TOP3B-207ENST00000437103 NFE2L2Q16236 605 aa16.31■□□□□ 0.2
TOP3B-207ENST00000437103 SMIM5Q71RC9 77 aa16.31■□□□□ 0.2
TOP3B-207ENST00000437103 PNISRQ8TF01 805 aaKnown RBP16.31■□□□□ 0.2
TOP3B-207ENST00000437103 ZNF496Q96IT1 587 aaPredicted RBP16.31■□□□□ 0.2
TOP3B-207ENST00000437103 TUBGCP6Q96RT7 1819 aa16.31■□□□□ 0.2
TOP3B-207ENST00000437103 MCM10Q7L590 875 aa16.3■□□□□ 0.2
TOP3B-207ENST00000437103 UBR3Q6ZT12 1888 aa16.3■□□□□ 0.2
TOP3B-207ENST00000437103 HEG1Q9ULI3 1381 aa16.29■□□□□ 0.2
TOP3B-207ENST00000437103 ZPR1O75312 459 aa16.29■□□□□ 0.2
TOP3B-207ENST00000437103 GYS1P13807 737 aa16.29■□□□□ 0.2
TOP3B-207ENST00000437103 CICQ96RK0 1608 aaPredicted RBP16.28■□□□□ 0.2
TOP3B-207ENST00000437103 A0A087WZG4 1122 aa16.28■□□□□ 0.2
TOP3B-207ENST00000437103 WDR43Q15061 677 aaKnown RBP eCLIP16.28■□□□□ 0.2
TOP3B-207ENST00000437103 KLHL34Q8N239 644 aa16.28■□□□□ 0.2
TOP3B-207ENST00000437103 SOS1Q07889 1333 aaPredicted RBP16.27■□□□□ 0.2
TOP3B-207ENST00000437103 MMP10P09238 476 aa16.27■□□□□ 0.2
TOP3B-207ENST00000437103 SNRPA1P09661 255 aaKnown RBP16.27■□□□□ 0.2
TOP3B-207ENST00000437103 KCPQ6ZWJ8 1503 aa16.27■□□□□ 0.2
TOP3B-207ENST00000437103 USP42Q9H9J4 1324 aaKnown RBP16.26■□□□□ 0.19
TOP3B-207ENST00000437103 EIF5P55010 431 aaKnown RBP16.26■□□□□ 0.19
TOP3B-207ENST00000437103 LMOD3Q0VAK6 560 aa16.26■□□□□ 0.19
TOP3B-207ENST00000437103 DCTN1Q14203 1278 aa16.26■□□□□ 0.19
TOP3B-207ENST00000437103 GPR162Q16538 588 aa16.26■□□□□ 0.19
TOP3B-207ENST00000437103 BABAM1Q9NWV8 329 aa16.26■□□□□ 0.19
TOP3B-207ENST00000437103 NARFQ9UHQ1 456 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms