RNA–Protein interactions for RNA: ENST00000436564.5

COPS7B-212, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-212ENST00000436564 FAM208AQ9UK61 1670 aaKnown RBP15.26■□□□□ 0.03
COPS7B-212ENST00000436564 SMARCC1Q92922 1105 aaPredicted RBP15.26■□□□□ 0.03
COPS7B-212ENST00000436564 RTL1A6NKG5 1358 aa15.25■□□□□ 0.03
COPS7B-212ENST00000436564 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.25■□□□□ 0.03
COPS7B-212ENST00000436564 KIF3CO14782 793 aa15.25■□□□□ 0.03
COPS7B-212ENST00000436564 AMIGO3Q86WK7 504 aa15.24■□□□□ 0.03
COPS7B-212ENST00000436564 APLP1P51693 650 aa15.23■□□□□ 0.03
COPS7B-212ENST00000436564 SMIM5Q71RC9 77 aa15.23■□□□□ 0.03
COPS7B-212ENST00000436564 SLC24A1O60721 1099 aa15.22■□□□□ 0.03
COPS7B-212ENST00000436564 SSFA2P28290 1259 aa15.22■□□□□ 0.03
COPS7B-212ENST00000436564 HSP90AB2PQ58FF8 381 aa15.22■□□□□ 0.03
COPS7B-212ENST00000436564 GGNBP2Q9H3C7 697 aa15.22■□□□□ 0.03
COPS7B-212ENST00000436564 NSD3Q9BZ95 1437 aa15.22■□□□□ 0.03
COPS7B-212ENST00000436564 FYB1O15117 783 aa15.21■□□□□ 0.03
COPS7B-212ENST00000436564 CYP27B1O15528 508 aa15.21■□□□□ 0.03
COPS7B-212ENST00000436564 PIGBQ92521 554 aa15.21■□□□□ 0.03
COPS7B-212ENST00000436564 ST20-MTHFSA0A0A6YYL1 179 aa15.2■□□□□ 0.02
COPS7B-212ENST00000436564 TESK2Q96S53 571 aa15.2■□□□□ 0.02
COPS7B-212ENST00000436564 LOC102724428A0A0B4J2F2 783 aa15.19■□□□□ 0.02
COPS7B-212ENST00000436564 TOMM70O94826 608 aa15.19■□□□□ 0.02
COPS7B-212ENST00000436564 SIK1P57059 783 aa15.19■□□□□ 0.02
COPS7B-212ENST00000436564 INSRP06213 1382 aa15.19■□□□□ 0.02
COPS7B-212ENST00000436564 C5P01031 1676 aa15.19■□□□□ 0.02
COPS7B-212ENST00000436564 GNPATO15228 680 aa15.18■□□□□ 0.02
COPS7B-212ENST00000436564 LINC00116Q8NCU8 138 aa15.18■□□□□ 0.02
COPS7B-212ENST00000436564 FLT4P35916 1363 aa15.17■□□□□ 0.02
COPS7B-212ENST00000436564 MMP10P09238 476 aa15.17■□□□□ 0.02
COPS7B-212ENST00000436564 DNAJC5GQ8N7S2 189 aa15.17■□□□□ 0.02
COPS7B-212ENST00000436564 SPG7Q9UQ90 795 aa15.17■□□□□ 0.02
COPS7B-212ENST00000436564 BCS1LQ9Y276 419 aa15.17■□□□□ 0.02
COPS7B-212ENST00000436564 TONSLQ96HA7 1378 aa15.16■□□□□ 0.02
COPS7B-212ENST00000436564 HAX1O00165 279 aa15.16■□□□□ 0.02
COPS7B-212ENST00000436564 ATP6V1AP38606 617 aa15.16■□□□□ 0.02
COPS7B-212ENST00000436564 TGFB2P61812 414 aa15.16■□□□□ 0.02
COPS7B-212ENST00000436564 ARHGAP27Q6ZUM4 889 aa15.16■□□□□ 0.02
COPS7B-212ENST00000436564 TMOD3Q9NYL9 352 aa15.16■□□□□ 0.02
COPS7B-212ENST00000436564 C4BP0C0L5 1744 aa15.16■□□□□ 0.02
COPS7B-212ENST00000436564 NKX1-1Q15270 411 aaPredicted RBP15.15■□□□□ 0.02
COPS7B-212ENST00000436564 KIF24Q5T7B8 1368 aa15.14■□□□□ 0.01
COPS7B-212ENST00000436564 A0A0G2JLW4 131 aa15.14■□□□□ 0.01
COPS7B-212ENST00000436564 ITPK1Q13572 414 aa15.14■□□□□ 0.01
COPS7B-212ENST00000436564 ASAP1Q9ULH1 1129 aa15.14■□□□□ 0.01
COPS7B-212ENST00000436564 RGPD2P0DJD1 1756 aa15.13■□□□□ 0.01
COPS7B-212ENST00000436564 PPM1GO15355 546 aaPredicted RBP15.13■□□□□ 0.01
COPS7B-212ENST00000436564 TMF1P82094 1093 aa15.13■□□□□ 0.01
COPS7B-212ENST00000436564 TRAPPC3LQ5T215 181 aa15.13■□□□□ 0.01
COPS7B-212ENST00000436564 C16orf71Q8IYS4 520 aaPredicted RBP15.13■□□□□ 0.01
COPS7B-212ENST00000436564 NLGN1Q8N2Q7 840 aa15.13■□□□□ 0.01
COPS7B-212ENST00000436564 NMRK2Q9NPI5 230 aa15.13■□□□□ 0.01
COPS7B-212ENST00000436564 FCHSD2O94868 740 aa15.12■□□□□ 0.01
COPS7B-212ENST00000436564 RTCBQ9Y3I0 505 aaKnown RBP15.12■□□□□ 0.01
COPS7B-212ENST00000436564 PXDNLA1KZ92 1463 aa15.12■□□□□ 0.01
COPS7B-212ENST00000436564 MNX1P50219 401 aaPredicted RBP15.11■□□□□ 0.01
COPS7B-212ENST00000436564 CCDC87Q9NVE4 849 aa15.11■□□□□ 0.01
COPS7B-212ENST00000436564 EMILIN1Q9Y6C2 1016 aa15.11■□□□□ 0.01
COPS7B-212ENST00000436564 DPEP1P16444 411 aa15.1■□□□□ 0.01
COPS7B-212ENST00000436564 IFNL2Q8IZJ0 200 aa15.1■□□□□ 0.01
COPS7B-212ENST00000436564 RBM46Q8TBY0 533 aaKnown RBP15.1■□□□□ 0.01
COPS7B-212ENST00000436564 ATG3Q9NT62 314 aa15.1■□□□□ 0.01
COPS7B-212ENST00000436564 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.1■□□□□ 0.01
COPS7B-212ENST00000436564 PHKG2P15735 406 aa15.09■□□□□ 0.01
COPS7B-212ENST00000436564 C9orf131Q5VYM1 1079 aa15.09■□□□□ 0.01
COPS7B-212ENST00000436564 PARP3Q9Y6F1 533 aa15.09■□□□□ 0.01
COPS7B-212ENST00000436564 CICQ96RK0 1608 aaPredicted RBP15.09■□□□□ 0.01
COPS7B-212ENST00000436564 TOGARAM1Q9Y4F4 1720 aa15.09■□□□□ 0.01
COPS7B-212ENST00000436564 TAF1LQ8IZX4 1826 aa15.08■□□□□ 0.01
COPS7B-212ENST00000436564 RFC4P35249 363 aa15.08■□□□□ 0
COPS7B-212ENST00000436564 CDCA8Q53HL2 280 aa15.08■□□□□ 0
COPS7B-212ENST00000436564 ARHGEF1Q92888 912 aaKnown RBP15.08■□□□□ 0
COPS7B-212ENST00000436564 KLRG1Q96E93 195 aa15.08■□□□□ 0
COPS7B-212ENST00000436564 EYA1Q99502 592 aa15.08■□□□□ 0
COPS7B-212ENST00000436564 HTRA3P83110 453 aa15.07■□□□□ 0
COPS7B-212ENST00000436564 FSTL1Q12841 308 aa15.07■□□□□ 0
COPS7B-212ENST00000436564 COL13A1Q5TAT6 717 aaPredicted RBP15.07■□□□□ 0
COPS7B-212ENST00000436564 UBR3Q6ZT12 1888 aa15.06■□□□□ 0
COPS7B-212ENST00000436564 GYS1P13807 737 aa15.06■□□□□ 0
COPS7B-212ENST00000436564 WASHC2AQ641Q2 1341 aa15.06■□□□□ 0
COPS7B-212ENST00000436564 KDM2BQ8NHM5 1336 aa15.06■□□□□ 0
COPS7B-212ENST00000436564 C10orf71Q711Q0 1435 aa15.06■□□□□ 0
COPS7B-212ENST00000436564 RC3H1Q5TC82 1133 aaKnown RBP15.05■□□□□ -0
COPS7B-212ENST00000436564 JMYQ8N9B5 988 aa15.05■□□□□ -0
COPS7B-212ENST00000436564 CARD14Q9BXL6 1004 aa15.05■□□□□ -0
COPS7B-212ENST00000436564 PIM2Q9P1W9 311 aa15.05■□□□□ -0
COPS7B-212ENST00000436564 PLEKHG2Q9H7P9 1386 aa15.05■□□□□ -0
COPS7B-212ENST00000436564 NCAPD2Q15021 1401 aa15.05■□□□□ -0
COPS7B-212ENST00000436564 C19orf67A6NJJ6 358 aa15.04■□□□□ -0
COPS7B-212ENST00000436564 RPS6KA4O75676 772 aa15.04■□□□□ -0
COPS7B-212ENST00000436564 DALRD3Q5D0E6 543 aaKnown RBP15.04■□□□□ -0
COPS7B-212ENST00000436564 RNF181Q9P0P0 153 aa15.04■□□□□ -0
COPS7B-212ENST00000436564 CNTNAP4Q9C0A0 1308 aa15.03■□□□□ -0
COPS7B-212ENST00000436564 ERVV-2B6SEH9 535 aa15.03■□□□□ -0
COPS7B-212ENST00000436564 CD44P16070 742 aaKnown RBP15.03■□□□□ -0
COPS7B-212ENST00000436564 KCNA3P22001 575 aa15.03■□□□□ -0
COPS7B-212ENST00000436564 SLC4A9Q96Q91 983 aa15.03■□□□□ -0
COPS7B-212ENST00000436564 RRAGCQ9HB90 399 aa15.03■□□□□ -0
COPS7B-212ENST00000436564 KDRP35968 1356 aa15.02■□□□□ -0
COPS7B-212ENST00000436564 TNS4Q8IZW8 715 aa15.02■□□□□ -0
COPS7B-212ENST00000436564 SPOCK2Q92563 424 aa15.02■□□□□ -0
COPS7B-212ENST00000436564 DCAF5Q96JK2 942 aa15.02■□□□□ -0
COPS7B-212ENST00000436564 PKD1L3Q7Z443 1732 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms