RNA–Protein interactions for RNA: ENST00000435327.2

CCDC13-202, Transcript of coiled-coil domain containing 13, humanhuman

TSL 2

Gene CCDC13, Length 821 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-202ENST00000435327 TAF7Q15545 349 aaPredicted RBP21.64■■□□□ 1.05
CCDC13-202ENST00000435327 KRT27Q7Z3Y8 459 aa21.64■■□□□ 1.05
CCDC13-202ENST00000435327 CFAP44Q96MT7 982 aa21.64■■□□□ 1.05
CCDC13-202ENST00000435327 MYH16Q9H6N6 1097 aa21.64■■□□□ 1.05
CCDC13-202ENST00000435327 SLC52A2Q9HAB3 445 aa21.64■■□□□ 1.05
CCDC13-202ENST00000435327 KDM3BQ7LBC6 1761 aa21.64■■□□□ 1.05
CCDC13-202ENST00000435327 ZNF853P0CG23 659 aa21.62■■□□□ 1.05
CCDC13-202ENST00000435327 FAM182BQ5T319 152 aa21.62■■□□□ 1.05
CCDC13-202ENST00000435327 NFATC2IPQ8NCF5 419 aa21.62■■□□□ 1.05
CCDC13-202ENST00000435327 TSR2Q969E8 191 aaKnown RBP21.62■■□□□ 1.05
CCDC13-202ENST00000435327 TSPYL4Q9UJ04 414 aa21.62■■□□□ 1.05
CCDC13-202ENST00000435327 ACSBG1Q96GR2 724 aa21.61■■□□□ 1.05
CCDC13-202ENST00000435327 MBIPQ9NS73 344 aa21.61■■□□□ 1.05
CCDC13-202ENST00000435327 TMOD3Q9NYL9 352 aa21.61■■□□□ 1.05
CCDC13-202ENST00000435327 MIS18AQ9NYP9 233 aa21.61■■□□□ 1.05
CCDC13-202ENST00000435327 SBF2Q86WG5 1849 aa21.61■■□□□ 1.05
CCDC13-202ENST00000435327 FANCIQ9NVI1 1328 aa21.6■■□□□ 1.05
CCDC13-202ENST00000435327 BTBD11A6QL63 1104 aa21.6■■□□□ 1.05
CCDC13-202ENST00000435327 CHL1O00533 1208 aa21.6■■□□□ 1.05
CCDC13-202ENST00000435327 SYTL4Q96C24 671 aaPredicted RBP21.6■■□□□ 1.05
CCDC13-202ENST00000435327 DUSP27Q5VZP5 1158 aa21.59■■□□□ 1.05
CCDC13-202ENST00000435327 TRMT2AQ8IZ69 625 aaKnown RBP21.59■■□□□ 1.05
CCDC13-202ENST00000435327 BABAM1Q9NWV8 329 aa21.59■■□□□ 1.05
CCDC13-202ENST00000435327 NHSQ6T4R5 1651 aa21.59■■□□□ 1.05
CCDC13-202ENST00000435327 PRIM1P49642 420 aaKnown RBP21.58■■□□□ 1.05
CCDC13-202ENST00000435327 PAPPAQ13219 1627 aa21.58■■□□□ 1.04
CCDC13-202ENST00000435327 BCL9O00512 1426 aa21.57■■□□□ 1.04
CCDC13-202ENST00000435327 CENPBP07199 599 aaPredicted RBP21.56■■□□□ 1.04
CCDC13-202ENST00000435327 SLC39A6Q13433 755 aa21.55■■□□□ 1.04
CCDC13-202ENST00000435327 FAM196AQ6ZSG2 479 aa21.55■■□□□ 1.04
CCDC13-202ENST00000435327 PIGBQ92521 554 aa21.55■■□□□ 1.04
CCDC13-202ENST00000435327 KCNQ3O43525 872 aa21.54■■□□□ 1.04
CCDC13-202ENST00000435327 UBR2Q8IWV8 1755 aa21.53■■□□□ 1.04
CCDC13-202ENST00000435327 BTAF1O14981 1849 aa21.53■■□□□ 1.04
CCDC13-202ENST00000435327 EXOSC9Q06265 439 aaKnown RBP21.53■■□□□ 1.04
CCDC13-202ENST00000435327 TTC5Q8N0Z6 440 aa21.53■■□□□ 1.04
CCDC13-202ENST00000435327 KCNQ2O43526 872 aa21.52■■□□□ 1.04
CCDC13-202ENST00000435327 ZNF790Q6PG37 636 aa21.52■■□□□ 1.04
CCDC13-202ENST00000435327 EIF4A1P60842 406 aaKnown RBP21.5■■□□□ 1.03
CCDC13-202ENST00000435327 KRT24Q2M2I5 525 aa21.49■■□□□ 1.03
CCDC13-202ENST00000435327 ATG3Q9NT62 314 aa21.49■■□□□ 1.03
CCDC13-202ENST00000435327 ASAP1Q9ULH1 1129 aa21.49■■□□□ 1.03
CCDC13-202ENST00000435327 ELL2O00472 640 aaPredicted RBP21.48■■□□□ 1.03
CCDC13-202ENST00000435327 C8orf58Q8NAV2 365 aa21.48■■□□□ 1.03
CCDC13-202ENST00000435327 KCPQ6ZWJ8 1503 aa21.48■■□□□ 1.03
CCDC13-202ENST00000435327 C5P01031 1676 aa21.47■■□□□ 1.03
CCDC13-202ENST00000435327 PTF1AQ7RTS3 328 aa21.47■■□□□ 1.03
CCDC13-202ENST00000435327 TSPYL6Q8N831 410 aa21.47■■□□□ 1.03
CCDC13-202ENST00000435327 ZNF496Q96IT1 587 aaPredicted RBP21.47■■□□□ 1.03
CCDC13-202ENST00000435327 FMNL2Q96PY5 1086 aa21.47■■□□□ 1.03
CCDC13-202ENST00000435327 TRIM37O94972 964 aa21.46■■□□□ 1.03
CCDC13-202ENST00000435327 TWISTNBQ3B726 338 aaPredicted RBP21.46■■□□□ 1.03
CCDC13-202ENST00000435327 BCL11BQ9C0K0 894 aaPredicted RBP21.46■■□□□ 1.03
CCDC13-202ENST00000435327 PTCD1O75127 700 aaKnown RBP21.45■■□□□ 1.02
CCDC13-202ENST00000435327 SMARCC1Q92922 1105 aaPredicted RBP21.45■■□□□ 1.02
CCDC13-202ENST00000435327 RBM42Q9BTD8 480 aaKnown RBP21.45■■□□□ 1.02
CCDC13-202ENST00000435327 LAMB4A4D0S4 1761 aa21.45■■□□□ 1.02
CCDC13-202ENST00000435327 PALLDQ8WX93 1383 aa21.44■■□□□ 1.02
CCDC13-202ENST00000435327 HEG1Q9ULI3 1381 aa21.44■■□□□ 1.02
CCDC13-202ENST00000435327 CT47B1P0C2W7 299 aaPredicted RBP21.43■■□□□ 1.02
CCDC13-202ENST00000435327 VAMP4O75379 141 aa21.42■■□□□ 1.02
CCDC13-202ENST00000435327 TNS1Q9HBL0 1735 aaKnown RBP21.42■■□□□ 1.02
CCDC13-202ENST00000435327 LY75O60449 1722 aa21.41■■□□□ 1.02
CCDC13-202ENST00000435327 SOS1Q07889 1333 aaPredicted RBP21.41■■□□□ 1.02
CCDC13-202ENST00000435327 GIGYF1O75420 1035 aaPredicted RBP21.41■■□□□ 1.02
CCDC13-202ENST00000435327 SNRPA1P09661 255 aaKnown RBP21.41■■□□□ 1.02
CCDC13-202ENST00000435327 TJP1Q07157 1748 aa21.41■■□□□ 1.02
CCDC13-202ENST00000435327 PRAMEF22A3QJZ6 481 aa21.4■■□□□ 1.02
CCDC13-202ENST00000435327 HOXB7P09629 217 aa21.4■■□□□ 1.02
CCDC13-202ENST00000435327 RCAN3Q9UKA8 241 aa21.4■■□□□ 1.02
CCDC13-202ENST00000435327 EIF2S2P20042 333 aaKnown RBP21.39■■□□□ 1.01
CCDC13-202ENST00000435327 NECTIN2Q92692 538 aa21.38■■□□□ 1.01
CCDC13-202ENST00000435327 ZNF831Q5JPB2 1677 aa21.37■■□□□ 1.01
CCDC13-202ENST00000435327 CICQ96RK0 1608 aaPredicted RBP21.37■■□□□ 1.01
CCDC13-202ENST00000435327 LOC102724428A0A0B4J2F2 783 aa21.37■■□□□ 1.01
CCDC13-202ENST00000435327 TCERG1O14776 1098 aaKnown RBP21.37■■□□□ 1.01
CCDC13-202ENST00000435327 SIK1P57059 783 aa21.37■■□□□ 1.01
CCDC13-202ENST00000435327 HDGFL1Q5TGJ6 251 aa21.37■■□□□ 1.01
CCDC13-202ENST00000435327 VSIG10Q8N0Z9 540 aa21.37■■□□□ 1.01
CCDC13-202ENST00000435327 ZNF428Q96B54 188 aa21.37■■□□□ 1.01
CCDC13-202ENST00000435327 RARSP54136 660 aaKnown RBP21.36■■□□□ 1.01
CCDC13-202ENST00000435327 CCDC30Q5VVM6 783 aa21.36■■□□□ 1.01
CCDC13-202ENST00000435327 DNAJC10Q8IXB1 793 aa21.36■■□□□ 1.01
CCDC13-202ENST00000435327 SLC4A9Q96Q91 983 aa21.36■■□□□ 1.01
CCDC13-202ENST00000435327 ATP6V1AP38606 617 aa21.35■■□□□ 1.01
CCDC13-202ENST00000435327 BCL2L13Q9BXK5 485 aa21.35■■□□□ 1.01
CCDC13-202ENST00000435327 TEX13AQ9BXU3 409 aaPredicted RBP21.35■■□□□ 1.01
CCDC13-202ENST00000435327 CHMP4AQ9BY43 222 aa21.35■■□□□ 1.01
CCDC13-202ENST00000435327 USP16Q9Y5T5 823 aa21.35■■□□□ 1.01
CCDC13-202ENST00000435327 CACNA1FO60840 1977 aa21.35■■□□□ 1.01
CCDC13-202ENST00000435327 APBA3O96018 575 aa21.34■■□□□ 1.01
CCDC13-202ENST00000435327 ALDH1L2Q3SY69 923 aa21.34■■□□□ 1.01
CCDC13-202ENST00000435327 SSH1Q8WYL5 1049 aa21.34■■□□□ 1.01
CCDC13-202ENST00000435327 STK31Q9BXU1 1019 aa21.34■■□□□ 1.01
CCDC13-202ENST00000435327 SMC4Q9NTJ3 1288 aa21.34■■□□□ 1.01
CCDC13-202ENST00000435327 COL5A3P25940 1745 aaPredicted RBP21.34■■□□□ 1.01
CCDC13-202ENST00000435327 CCNL1Q9UK58 526 aaPredicted RBP21.33■■□□□ 1.01
CCDC13-202ENST00000435327 TAF1LQ8IZX4 1826 aa21.33■■□□□ 1.01
CCDC13-202ENST00000435327 BCAR3O75815 825 aa21.32■■□□□ 1
CCDC13-202ENST00000435327 RGPD3A6NKT7 1758 aaPredicted RBP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms