RNA–Protein interactions for RNA: ENST00000435074.5

HLA-DPB2-205, Transcript of major histocompatibility complex, class II, DP beta 2 (pseudogene), humanhuman

BASIC

Gene HLA-DPB2, Length 1,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB2-205ENST00000435074 CCDC87Q9NVE4 849 aa20.36■□□□□ 0.85
HLA-DPB2-205ENST00000435074 SBF1O95248 1867 aa20.35■□□□□ 0.85
HLA-DPB2-205ENST00000435074 MLLT1Q03111 559 aaPredicted RBP20.35■□□□□ 0.85
HLA-DPB2-205ENST00000435074 GNPATO15228 680 aa20.34■□□□□ 0.85
HLA-DPB2-205ENST00000435074 CTCFP49711 727 aaPredicted RBP20.34■□□□□ 0.85
HLA-DPB2-205ENST00000435074 AIDAQ96BJ3 306 aa20.34■□□□□ 0.85
HLA-DPB2-205ENST00000435074 ABHD8Q96I13 439 aa20.34■□□□□ 0.85
HLA-DPB2-205ENST00000435074 DCAF5Q96JK2 942 aa20.34■□□□□ 0.85
HLA-DPB2-205ENST00000435074 PIM2Q9P1W9 311 aa20.34■□□□□ 0.85
HLA-DPB2-205ENST00000435074 MKRN1Q9UHC7 482 aaKnown RBP20.34■□□□□ 0.85
HLA-DPB2-205ENST00000435074 RGPD2P0DJD1 1756 aa20.34■□□□□ 0.85
HLA-DPB2-205ENST00000435074 CGNL1Q0VF96 1302 aa20.33■□□□□ 0.85
HLA-DPB2-205ENST00000435074 NLGN1Q8N2Q7 840 aa20.33■□□□□ 0.85
HLA-DPB2-205ENST00000435074 DALRD3Q5D0E6 543 aaKnown RBP20.32■□□□□ 0.84
HLA-DPB2-205ENST00000435074 LINC00116Q8NCU8 138 aa20.32■□□□□ 0.84
HLA-DPB2-205ENST00000435074 ZC3H4Q9UPT8 1303 aaKnown RBP20.31■□□□□ 0.84
HLA-DPB2-205ENST00000435074 DSG3P32926 999 aa20.31■□□□□ 0.84
HLA-DPB2-205ENST00000435074 CREBZFQ9NS37 354 aa20.31■□□□□ 0.84
HLA-DPB2-205ENST00000435074 SBNO2Q9Y2G9 1366 aa20.31■□□□□ 0.84
HLA-DPB2-205ENST00000435074 ABCB7O75027 752 aa20.3■□□□□ 0.84
HLA-DPB2-205ENST00000435074 KCNA3P22001 575 aa20.3■□□□□ 0.84
HLA-DPB2-205ENST00000435074 TMF1P82094 1093 aa20.3■□□□□ 0.84
HLA-DPB2-205ENST00000435074 RAPGEF4Q8WZA2 1011 aa20.3■□□□□ 0.84
HLA-DPB2-205ENST00000435074 ITGB4P16144 1822 aa20.3■□□□□ 0.84
HLA-DPB2-205ENST00000435074 PCDH11XQ9BZA7 1347 aa20.29■□□□□ 0.84
HLA-DPB2-205ENST00000435074 PCDH11YQ9BZA8 1340 aa20.29■□□□□ 0.84
HLA-DPB2-205ENST00000435074 LOC102724428A0A0B4J2F2 783 aa20.28■□□□□ 0.84
HLA-DPB2-205ENST00000435074 GLTPD2A6NH11 291 aa20.28■□□□□ 0.84
HLA-DPB2-205ENST00000435074 SIK1P57059 783 aa20.28■□□□□ 0.84
HLA-DPB2-205ENST00000435074 POLA2Q14181 598 aa20.28■□□□□ 0.84
HLA-DPB2-205ENST00000435074 PARP3Q9Y6F1 533 aa20.28■□□□□ 0.84
HLA-DPB2-205ENST00000435074 RAB3GAP2Q9H2M9 1393 aa20.28■□□□□ 0.84
HLA-DPB2-205ENST00000435074 C4AP0C0L4 1744 aa20.27■□□□□ 0.84
HLA-DPB2-205ENST00000435074 HOXC9P31274 260 aa20.27■□□□□ 0.84
HLA-DPB2-205ENST00000435074 MAP2P11137 1827 aaKnown RBP20.26■□□□□ 0.83
HLA-DPB2-205ENST00000435074 TATP17735 454 aaPredicted RBP20.26■□□□□ 0.83
HLA-DPB2-205ENST00000435074 AMPHP49418 695 aa20.26■□□□□ 0.83
HLA-DPB2-205ENST00000435074 LBX1P52954 281 aa20.26■□□□□ 0.83
HLA-DPB2-205ENST00000435074 PDE4DIPQ5VU43 2346 aa20.25■□□□□ 0.83
HLA-DPB2-205ENST00000435074 TRAPPC3LQ5T215 181 aa20.25■□□□□ 0.83
HLA-DPB2-205ENST00000435074 PIGBQ92521 554 aa20.25■□□□□ 0.83
HLA-DPB2-205ENST00000435074 RGS19P49795 217 aa20.24■□□□□ 0.83
HLA-DPB2-205ENST00000435074 NBPF6Q5VWK0 638 aa20.24■□□□□ 0.83
HLA-DPB2-205ENST00000435074 HDGFL2Q7Z4V5 671 aaPredicted RBP20.24■□□□□ 0.83
HLA-DPB2-205ENST00000435074 USHBP1Q8N6Y0 703 aa20.24■□□□□ 0.83
HLA-DPB2-205ENST00000435074 NBPF4Q96M43 638 aa20.24■□□□□ 0.83
HLA-DPB2-205ENST00000435074 MAP3K19Q56UN5 1328 aa20.24■□□□□ 0.83
HLA-DPB2-205ENST00000435074 CCDC85CA6NKD9 419 aa20.23■□□□□ 0.83
HLA-DPB2-205ENST00000435074 ATP6V1AP38606 617 aa20.23■□□□□ 0.83
HLA-DPB2-205ENST00000435074 ITPK1Q13572 414 aa20.23■□□□□ 0.83
HLA-DPB2-205ENST00000435074 CNTNAP1P78357 1384 aa20.22■□□□□ 0.83
HLA-DPB2-205ENST00000435074 EDC4Q6P2E9 1401 aaKnown RBP20.22■□□□□ 0.83
HLA-DPB2-205ENST00000435074 RTCBQ9Y3I0 505 aaKnown RBP20.22■□□□□ 0.83
HLA-DPB2-205ENST00000435074 CD163L1Q9NR16 1453 aa20.22■□□□□ 0.83
HLA-DPB2-205ENST00000435074 LMNB1P20700 586 aa20.21■□□□□ 0.83
HLA-DPB2-205ENST00000435074 TMC1Q8TDI8 760 aa20.21■□□□□ 0.83
HLA-DPB2-205ENST00000435074 CYP27B1O15528 508 aa20.2■□□□□ 0.82
HLA-DPB2-205ENST00000435074 RASSF7Q02833 373 aa20.2■□□□□ 0.82
HLA-DPB2-205ENST00000435074 KDM6AO15550 1401 aaPredicted RBP20.19■□□□□ 0.82
HLA-DPB2-205ENST00000435074 GYS1P13807 737 aa20.19■□□□□ 0.82
HLA-DPB2-205ENST00000435074 WBP1LQ9NX94 342 aa20.19■□□□□ 0.82
HLA-DPB2-205ENST00000435074 RFC4P35249 363 aa20.18■□□□□ 0.82
HLA-DPB2-205ENST00000435074 CHADLQ6NUI6 762 aa20.18■□□□□ 0.82
HLA-DPB2-205ENST00000435074 ARHGEF1Q92888 912 aaKnown RBP20.18■□□□□ 0.82
HLA-DPB2-205ENST00000435074 POTECB2RU33 542 aa20.17■□□□□ 0.82
HLA-DPB2-205ENST00000435074 CHRNA5P30532 468 aa20.17■□□□□ 0.82
HLA-DPB2-205ENST00000435074 HSPA8P11142 646 aaKnown RBP20.16■□□□□ 0.82
HLA-DPB2-205ENST00000435074 VEGFBP49765 207 aa20.16■□□□□ 0.82
HLA-DPB2-205ENST00000435074 ASAP1Q9ULH1 1129 aa20.16■□□□□ 0.82
HLA-DPB2-205ENST00000435074 SMG6Q86US8 1419 aaKnown RBP20.16■□□□□ 0.82
HLA-DPB2-205ENST00000435074 CCDC88AQ3V6T2 1871 aa20.16■□□□□ 0.82
HLA-DPB2-205ENST00000435074 FBLN1P23142 703 aa20.15■□□□□ 0.82
HLA-DPB2-205ENST00000435074 DPY19L2Q6NUT2 758 aa20.15■□□□□ 0.82
HLA-DPB2-205ENST00000435074 COG3Q96JB2 828 aa20.15■□□□□ 0.82
HLA-DPB2-205ENST00000435074 TERF2IPQ9NYB0 399 aa20.15■□□□□ 0.82
HLA-DPB2-205ENST00000435074 TMOD3Q9NYL9 352 aa20.15■□□□□ 0.82
HLA-DPB2-205ENST00000435074 TIAM2Q8IVF5 1701 aa20.15■□□□□ 0.82
HLA-DPB2-205ENST00000435074 RTL1A6NKG5 1358 aa20.14■□□□□ 0.81
HLA-DPB2-205ENST00000435074 SLC12A5Q9H2X9 1139 aa20.14■□□□□ 0.81
HLA-DPB2-205ENST00000435074 VIRMAQ69YN4 1812 aaKnown RBP20.13■□□□□ 0.81
HLA-DPB2-205ENST00000435074 A0A1W2PP64 1363 aa20.11■□□□□ 0.81
HLA-DPB2-205ENST00000435074 NKX1-1Q15270 411 aaPredicted RBP20.11■□□□□ 0.81
HLA-DPB2-205ENST00000435074 RPS6KA4O75676 772 aa20.09■□□□□ 0.81
HLA-DPB2-205ENST00000435074 RC3H1Q5TC82 1133 aaKnown RBP20.09■□□□□ 0.81
HLA-DPB2-205ENST00000435074 CFAP44Q96MT7 982 aa20.09■□□□□ 0.81
HLA-DPB2-205ENST00000435074 TMEM88BA6NKF7 163 aa20.08■□□□□ 0.81
HLA-DPB2-205ENST00000435074 MAP2K1Q02750 393 aaPredicted RBP20.08■□□□□ 0.81
HLA-DPB2-205ENST00000435074 DDR1Q08345 913 aa20.08■□□□□ 0.81
HLA-DPB2-205ENST00000435074 RRS1Q15050 365 aaKnown RBP20.08■□□□□ 0.81
HLA-DPB2-205ENST00000435074 ATG3Q9NT62 314 aa20.08■□□□□ 0.81
HLA-DPB2-205ENST00000435074 PASKQ96RG2 1323 aa20.07■□□□□ 0.8
HLA-DPB2-205ENST00000435074 POTEIP0CG38 1075 aa20.07■□□□□ 0.8
HLA-DPB2-205ENST00000435074 POTEJP0CG39 1038 aa20.07■□□□□ 0.8
HLA-DPB2-205ENST00000435074 ROCK2O75116 1388 aaKnown RBP20.07■□□□□ 0.8
HLA-DPB2-205ENST00000435074 CNTNAP4Q9C0A0 1308 aa20.06■□□□□ 0.8
HLA-DPB2-205ENST00000435074 SPG7Q9UQ90 795 aa20.06■□□□□ 0.8
HLA-DPB2-205ENST00000435074 FKBP8Q14318 412 aa20.05■□□□□ 0.8
HLA-DPB2-205ENST00000435074 KDRP35968 1356 aa20.05■□□□□ 0.8
HLA-DPB2-205ENST00000435074 RBM42Q9BTD8 480 aaKnown RBP20.04■□□□□ 0.8
HLA-DPB2-205ENST00000435074 NFKBIEO00221 500 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms