RNA–Protein interactions for RNA: ENST00000434030.1

SEMA3B-205, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 1,011 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-205ENST00000434030 SYT17Q9BSW7 474 aa29.88■■■□□ 2.37
SEMA3B-205ENST00000434030 ZNF831Q5JPB2 1677 aa29.88■■■□□ 2.37
SEMA3B-205ENST00000434030 ATP6V1AP38606 617 aa29.87■■■□□ 2.37
SEMA3B-205ENST00000434030 LINC00116Q8NCU8 138 aa29.87■■■□□ 2.37
SEMA3B-205ENST00000434030 ITPK1Q13572 414 aa29.86■■■□□ 2.37
SEMA3B-205ENST00000434030 AKAP4Q5JQC9 854 aa29.86■■■□□ 2.37
SEMA3B-205ENST00000434030 FLAD1Q8NFF5 587 aa29.86■■■□□ 2.37
SEMA3B-205ENST00000434030 AK7Q96M32 723 aa29.86■■■□□ 2.37
SEMA3B-205ENST00000434030 POLD1P28340 1107 aa29.85■■■□□ 2.37
SEMA3B-205ENST00000434030 NFATC2IPQ8NCF5 419 aa29.84■■■□□ 2.37
SEMA3B-205ENST00000434030 AMIGO3Q86WK7 504 aa29.83■■■□□ 2.37
SEMA3B-205ENST00000434030 U2SURPO15042 1029 aaKnown RBP29.82■■■□□ 2.36
SEMA3B-205ENST00000434030 SLC4A9Q96Q91 983 aa29.82■■■□□ 2.36
SEMA3B-205ENST00000434030 RBM42Q9BTD8 480 aaKnown RBP29.82■■■□□ 2.36
SEMA3B-205ENST00000434030 COL5A3P25940 1745 aaPredicted RBP29.82■■■□□ 2.36
SEMA3B-205ENST00000434030 DCAF8L1A6NGE4 600 aa29.81■■■□□ 2.36
SEMA3B-205ENST00000434030 MTHFSDQ2M296 383 aaKnown RBP29.81■■■□□ 2.36
SEMA3B-205ENST00000434030 MAP3K5Q99683 1374 aa29.8■■■□□ 2.36
SEMA3B-205ENST00000434030 SMIM5Q71RC9 77 aa29.8■■■□□ 2.36
SEMA3B-205ENST00000434030 LGR6Q9HBX8 967 aa29.8■■■□□ 2.36
SEMA3B-205ENST00000434030 PPP2R1AP30153 589 aa29.79■■■□□ 2.36
SEMA3B-205ENST00000434030 MYH14Q7Z406 1995 aaKnown RBP29.78■■■□□ 2.36
SEMA3B-205ENST00000434030 MSL1Q68DK7 614 aa29.78■■■□□ 2.36
SEMA3B-205ENST00000434030 CFAP53Q96M91 514 aa29.78■■■□□ 2.36
SEMA3B-205ENST00000434030 ADAMTS7Q9UKP4 1686 aa29.78■■■□□ 2.36
SEMA3B-205ENST00000434030 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.77■■■□□ 2.36
SEMA3B-205ENST00000434030 PHF14O94880 888 aa29.77■■■□□ 2.36
SEMA3B-205ENST00000434030 SSFA2P28290 1259 aa29.77■■■□□ 2.36
SEMA3B-205ENST00000434030 RNMTO43148 476 aaKnown RBP29.76■■■□□ 2.35
SEMA3B-205ENST00000434030 GNPATO15228 680 aa29.75■■■□□ 2.35
SEMA3B-205ENST00000434030 SLC52A2Q9HAB3 445 aa29.75■■■□□ 2.35
SEMA3B-205ENST00000434030 PTCD1O75127 700 aaKnown RBP29.74■■■□□ 2.35
SEMA3B-205ENST00000434030 KLHL34Q8N239 644 aa29.73■■■□□ 2.35
SEMA3B-205ENST00000434030 MRC1P22897 1456 aa29.73■■■□□ 2.35
SEMA3B-205ENST00000434030 TJP1Q07157 1748 aa29.71■■■□□ 2.35
SEMA3B-205ENST00000434030 RC3H1Q5TC82 1133 aaKnown RBP29.71■■■□□ 2.35
SEMA3B-205ENST00000434030 CICQ96RK0 1608 aaPredicted RBP29.71■■■□□ 2.35
SEMA3B-205ENST00000434030 NUDCQ9Y266 331 aa29.7■■■□□ 2.35
SEMA3B-205ENST00000434030 CNTNAP4Q9C0A0 1308 aa29.69■■■□□ 2.34
SEMA3B-205ENST00000434030 GAS2L2Q8NHY3 880 aa29.68■■■□□ 2.34
SEMA3B-205ENST00000434030 RSPH6AQ9H0K4 717 aa29.68■■■□□ 2.34
SEMA3B-205ENST00000434030 RTCBQ9Y3I0 505 aaKnown RBP29.68■■■□□ 2.34
SEMA3B-205ENST00000434030 CHD4Q14839 1912 aa29.67■■■□□ 2.34
SEMA3B-205ENST00000434030 PRKAR2BP31323 418 aa29.66■■■□□ 2.34
SEMA3B-205ENST00000434030 TRAPPC3LQ5T215 181 aa29.66■■■□□ 2.34
SEMA3B-205ENST00000434030 PHACTR3Q96KR7 559 aa29.66■■■□□ 2.34
SEMA3B-205ENST00000434030 SIPA1L3O60292 1781 aaPredicted RBP29.66■■■□□ 2.34
SEMA3B-205ENST00000434030 RPS6KA4O75676 772 aa29.65■■■□□ 2.34
SEMA3B-205ENST00000434030 SLC39A6Q13433 755 aa29.65■■■□□ 2.34
SEMA3B-205ENST00000434030 NLGN2Q8NFZ4 835 aa29.65■■■□□ 2.34
SEMA3B-205ENST00000434030 GNAT3A8MTJ3 354 aa29.64■■■□□ 2.34
SEMA3B-205ENST00000434030 U2AF1L5P0DN76 240 aaPredicted RBP29.64■■■□□ 2.34
SEMA3B-205ENST00000434030 U2AF1Q01081 240 aaKnown RBP eCLIP29.64■■■□□ 2.34
SEMA3B-205ENST00000434030 C4AP0C0L4 1744 aa29.64■■■□□ 2.34
SEMA3B-205ENST00000434030 UBR2Q8IWV8 1755 aa29.64■■■□□ 2.34
SEMA3B-205ENST00000434030 IL17REQ8NFR9 667 aa29.63■■■□□ 2.33
SEMA3B-205ENST00000434030 YY1P25490 414 aa29.62■■■□□ 2.33
SEMA3B-205ENST00000434030 CRKLP46109 303 aaKnown RBP29.62■■■□□ 2.33
SEMA3B-205ENST00000434030 ARHGEF1Q92888 912 aaKnown RBP29.62■■■□□ 2.33
SEMA3B-205ENST00000434030 KCPQ6ZWJ8 1503 aa29.61■■■□□ 2.33
SEMA3B-205ENST00000434030 ADRA2BP18089 450 aa29.61■■■□□ 2.33
SEMA3B-205ENST00000434030 FCHSD2O94868 740 aa29.6■■■□□ 2.33
SEMA3B-205ENST00000434030 DNAJC10Q8IXB1 793 aa29.59■■■□□ 2.33
SEMA3B-205ENST00000434030 CD2APQ9Y5K6 639 aa29.59■■■□□ 2.33
SEMA3B-205ENST00000434030 UTRNP46939 3433 aa29.58■■■□□ 2.33
SEMA3B-205ENST00000434030 GPR162Q16538 588 aa29.58■■■□□ 2.33
SEMA3B-205ENST00000434030 RFC4P35249 363 aa29.57■■■□□ 2.32
SEMA3B-205ENST00000434030 TEFQ10587 303 aa29.57■■■□□ 2.32
SEMA3B-205ENST00000434030 DDX10Q13206 875 aaKnown RBP29.56■■■□□ 2.32
SEMA3B-205ENST00000434030 INTS5Q6P9B9 1019 aaKnown RBP29.56■■■□□ 2.32
SEMA3B-205ENST00000434030 CEMIPQ8WUJ3 1361 aa29.54■■■□□ 2.32
SEMA3B-205ENST00000434030 DLG5Q8TDM6 1919 aa29.54■■■□□ 2.32
SEMA3B-205ENST00000434030 VSIG10Q8N0Z9 540 aa29.54■■■□□ 2.32
SEMA3B-205ENST00000434030 NLGN1Q8N2Q7 840 aa29.54■■■□□ 2.32
SEMA3B-205ENST00000434030 MMP10P09238 476 aa29.53■■■□□ 2.32
SEMA3B-205ENST00000434030 CYP19A1P11511 503 aaPredicted RBP29.53■■■□□ 2.32
SEMA3B-205ENST00000434030 GYS1P13807 737 aa29.53■■■□□ 2.32
SEMA3B-205ENST00000434030 PELP1Q8IZL8 1130 aaKnown RBP29.53■■■□□ 2.32
SEMA3B-205ENST00000434030 TTC5Q8N0Z6 440 aa29.52■■■□□ 2.32
SEMA3B-205ENST00000434030 CCDC87Q9NVE4 849 aa29.52■■■□□ 2.32
SEMA3B-205ENST00000434030 KIF13BQ9NQT8 1826 aa29.51■■■□□ 2.31
SEMA3B-205ENST00000434030 ZNF790Q6PG37 636 aa29.51■■■□□ 2.31
SEMA3B-205ENST00000434030 RALBP1Q15311 655 aa29.49■■■□□ 2.31
SEMA3B-205ENST00000434030 GOLGB1Q14789 3259 aaKnown RBP29.48■■■□□ 2.31
SEMA3B-205ENST00000434030 ZNF496Q96IT1 587 aaPredicted RBP29.48■■■□□ 2.31
SEMA3B-205ENST00000434030 SRP68Q9UHB9 627 aaKnown RBP29.48■■■□□ 2.31
SEMA3B-205ENST00000434030 YBX3P16989 372 aaKnown RBP eCLIP29.47■■■□□ 2.31
SEMA3B-205ENST00000434030 RTF1Q92541 710 aaKnown RBP29.47■■■□□ 2.31
SEMA3B-205ENST00000434030 SOS1Q07889 1333 aaPredicted RBP29.46■■■□□ 2.31
SEMA3B-205ENST00000434030 USP42Q9H9J4 1324 aaKnown RBP29.46■■■□□ 2.31
SEMA3B-205ENST00000434030 MCM10Q7L590 875 aa29.46■■■□□ 2.31
SEMA3B-205ENST00000434030 ZBTB1Q9Y2K1 713 aa29.46■■■□□ 2.31
SEMA3B-205ENST00000434030 HEG1Q9ULI3 1381 aa29.45■■■□□ 2.31
SEMA3B-205ENST00000434030 BTBD11A6QL63 1104 aa29.45■■■□□ 2.31
SEMA3B-205ENST00000434030 N4BP2Q86UW6 1770 aaPredicted RBP29.44■■■□□ 2.3
SEMA3B-205ENST00000434030 HTATSF1O43719 755 aaKnown RBP29.44■■■□□ 2.3
SEMA3B-205ENST00000434030 KCNQ3O43525 872 aa29.43■■■□□ 2.3
SEMA3B-205ENST00000434030 DCTN1Q14203 1278 aa29.43■■■□□ 2.3
SEMA3B-205ENST00000434030 FKBP8Q14318 412 aa29.43■■■□□ 2.3
SEMA3B-205ENST00000434030 PLEKHF1Q96S99 279 aa29.43■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms