RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 PTK7Q13308 1070 aa6.83□□□□□ -1.32
LINC01239-201ENST00000433645 ELOAQ14241 798 aaKnown RBP6.83□□□□□ -1.32
LINC01239-201ENST00000433645 SLC27A3Q5K4L6 730 aa6.83□□□□□ -1.32
LINC01239-201ENST00000433645 PPARGC1BQ86YN6 1023 aaKnown RBP6.83□□□□□ -1.32
LINC01239-201ENST00000433645 ZSCAN10Q96SZ4 725 aaPredicted RBP6.83□□□□□ -1.32
LINC01239-201ENST00000433645 C1orf115Q9H7X2 142 aa6.83□□□□□ -1.32
LINC01239-201ENST00000433645 RAB6BQ9NRW1 208 aa6.83□□□□□ -1.32
LINC01239-201ENST00000433645 RBM19Q9Y4C8 960 aaKnown RBP6.83□□□□□ -1.32
LINC01239-201ENST00000433645 FIGNL2A6NMB9 653 aa6.82□□□□□ -1.32
LINC01239-201ENST00000433645 CDK2AP1O14519 115 aa6.82□□□□□ -1.32
LINC01239-201ENST00000433645 PPP1R15AO75807 674 aaPredicted RBP6.82□□□□□ -1.32
LINC01239-201ENST00000433645 GTF2E1P29083 439 aaPredicted RBP6.82□□□□□ -1.32
LINC01239-201ENST00000433645 CCDC82Q8N4S0 544 aa6.82□□□□□ -1.32
LINC01239-201ENST00000433645 NBPF15Q8N660 670 aa6.82□□□□□ -1.32
LINC01239-201ENST00000433645 TPCN2Q8NHX9 752 aa6.82□□□□□ -1.32
LINC01239-201ENST00000433645 PBXIP1Q96AQ6 731 aa6.82□□□□□ -1.32
LINC01239-201ENST00000433645 ZNF358Q9NW07 568 aa6.82□□□□□ -1.32
LINC01239-201ENST00000433645 NXF1Q9UBU9 619 aaKnown RBP6.82□□□□□ -1.32
LINC01239-201ENST00000433645 SLC35F4A4IF30 521 aa6.81□□□□□ -1.32
LINC01239-201ENST00000433645 A6NJY4 79 aa6.81□□□□□ -1.32
LINC01239-201ENST00000433645 USP17L15C9J2P7 530 aa6.81□□□□□ -1.32
LINC01239-201ENST00000433645 USP17L10C9JJH3 530 aa6.81□□□□□ -1.32
LINC01239-201ENST00000433645 USP17L13C9JLJ4 530 aa6.81□□□□□ -1.32
LINC01239-201ENST00000433645 USP17L12C9JPN9 530 aa6.81□□□□□ -1.32
LINC01239-201ENST00000433645 USP17L11C9JVI0 530 aa6.81□□□□□ -1.32
LINC01239-201ENST00000433645 USP17L21D6R901 530 aa6.81□□□□□ -1.32
LINC01239-201ENST00000433645 USP17L18D6R9N7 530 aa6.81□□□□□ -1.32
LINC01239-201ENST00000433645 USP17L22D6RA61 530 aa6.81□□□□□ -1.32
LINC01239-201ENST00000433645 USP17L17D6RBQ6 530 aa6.81□□□□□ -1.32
LINC01239-201ENST00000433645 USP17L19D6RCP7 530 aa6.81□□□□□ -1.32
LINC01239-201ENST00000433645 USP17L20D6RJB6 530 aa6.81□□□□□ -1.32
LINC01239-201ENST00000433645 SEC13P55735 322 aa6.81□□□□□ -1.32
LINC01239-201ENST00000433645 USP17L24Q0WX57 530 aa6.81□□□□□ -1.32
LINC01239-201ENST00000433645 TLR1Q15399 786 aa6.81□□□□□ -1.32
LINC01239-201ENST00000433645 TAS1R3Q7RTX0 852 aa6.81□□□□□ -1.32
LINC01239-201ENST00000433645 RHBDD1Q8TEB9 315 aa6.81□□□□□ -1.32
LINC01239-201ENST00000433645 KIAA1024Q9UPX6 916 aa6.81□□□□□ -1.32
LINC01239-201ENST00000433645 ATG7O95352 703 aa6.8□□□□□ -1.32
LINC01239-201ENST00000433645 EPHA4P54764 986 aa6.8□□□□□ -1.32
LINC01239-201ENST00000433645 PTSQ03393 145 aa6.8□□□□□ -1.32
LINC01239-201ENST00000433645 CRTC2Q53ET0 693 aaPredicted RBP6.8□□□□□ -1.32
LINC01239-201ENST00000433645 GNASQ5JWF2 1037 aa6.8□□□□□ -1.32
LINC01239-201ENST00000433645 NBPF10Q6P3W6 841 aaKnown RBP6.8□□□□□ -1.32
LINC01239-201ENST00000433645 ANKMY2Q8IV38 441 aa6.8□□□□□ -1.32
LINC01239-201ENST00000433645 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.8□□□□□ -1.32
LINC01239-201ENST00000433645 SCHIP1Q9P0W5 487 aaPredicted RBP6.8□□□□□ -1.32
LINC01239-201ENST00000433645 IQSEC3Q9UPP2 1182 aaPredicted RBP6.8□□□□□ -1.32
LINC01239-201ENST00000433645 RFX1P22670 979 aa6.79□□□□□ -1.32
LINC01239-201ENST00000433645 FOXK2Q01167 660 aa6.79□□□□□ -1.32
LINC01239-201ENST00000433645 TMEM214Q6NUQ4 689 aaKnown RBP6.79□□□□□ -1.32
LINC01239-201ENST00000433645 PRICKLE2Q7Z3G6 844 aa6.79□□□□□ -1.32
LINC01239-201ENST00000433645 GAS2L2Q8NHY3 880 aa6.79□□□□□ -1.32
LINC01239-201ENST00000433645 GMCL1Q96IK5 515 aa6.79□□□□□ -1.32
LINC01239-201ENST00000433645 ZNF594Q96JF6 807 aaPredicted RBP6.79□□□□□ -1.32
LINC01239-201ENST00000433645 ARXQ96QS3 562 aa6.79□□□□□ -1.32
LINC01239-201ENST00000433645 DYRK1BQ9Y463 629 aa6.79□□□□□ -1.32
LINC01239-201ENST00000433645 SENP3-EIF4A1A0A087X0R7 540 aa6.78□□□□□ -1.32
LINC01239-201ENST00000433645 SOBPA7XYQ1 873 aa6.78□□□□□ -1.32
LINC01239-201ENST00000433645 TERTO14746 1132 aaKnown RBP6.78□□□□□ -1.32
LINC01239-201ENST00000433645 STAU1O95793 577 aaKnown RBP6.78□□□□□ -1.32
LINC01239-201ENST00000433645 ZNF295-AS1Q8N0V1 137 aa6.78□□□□□ -1.32
LINC01239-201ENST00000433645 C1orf216Q8TAB5 229 aa6.78□□□□□ -1.32
LINC01239-201ENST00000433645 NIFKQ9BYG3 293 aaKnown RBP6.78□□□□□ -1.32
LINC01239-201ENST00000433645 A0A1B0GTH6 734 aa6.77□□□□□ -1.33
LINC01239-201ENST00000433645 H3BM21 787 aa6.77□□□□□ -1.33
LINC01239-201ENST00000433645 POU4F2Q12837 409 aa6.77□□□□□ -1.33
LINC01239-201ENST00000433645 DPYDQ12882 1025 aa6.77□□□□□ -1.33
LINC01239-201ENST00000433645 POTEAQ6S8J7 498 aa6.77□□□□□ -1.33
LINC01239-201ENST00000433645 STAG2Q8N3U4 1231 aa6.77□□□□□ -1.33
LINC01239-201ENST00000433645 CCDC155Q8N6L0 562 aa6.77□□□□□ -1.33
LINC01239-201ENST00000433645 FAM200AQ8TCP9 573 aa6.77□□□□□ -1.33
LINC01239-201ENST00000433645 SLC16A10Q8TF71 515 aa6.77□□□□□ -1.33
LINC01239-201ENST00000433645 NANOS1Q8WY41 292 aaKnown RBP6.77□□□□□ -1.33
LINC01239-201ENST00000433645 SERTAD1Q9UHV2 236 aa6.77□□□□□ -1.33
LINC01239-201ENST00000433645 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.76□□□□□ -1.33
LINC01239-201ENST00000433645 PPFIA3O75145 1194 aa6.76□□□□□ -1.33
LINC01239-201ENST00000433645 VSIG8P0DPA2 414 aa6.76□□□□□ -1.33
LINC01239-201ENST00000433645 TEAD4Q15561 434 aa6.76□□□□□ -1.33
LINC01239-201ENST00000433645 SWI5Q1ZZU3 235 aa6.76□□□□□ -1.33
LINC01239-201ENST00000433645 C4orf17Q53FE4 359 aa6.76□□□□□ -1.33
LINC01239-201ENST00000433645 ZNF775Q96BV0 537 aaPredicted RBP6.76□□□□□ -1.33
LINC01239-201ENST00000433645 TIMMDC1Q9NPL8 285 aa6.76□□□□□ -1.33
LINC01239-201ENST00000433645 SFI1A8K8P3 1242 aa6.75□□□□□ -1.33
LINC01239-201ENST00000433645 SUPT5HO00267 1087 aaKnown RBP6.75□□□□□ -1.33
LINC01239-201ENST00000433645 HIRAP54198 1017 aaPredicted RBP6.75□□□□□ -1.33
LINC01239-201ENST00000433645 NFX1Q12986 1120 aaKnown RBP6.75□□□□□ -1.33
LINC01239-201ENST00000433645 LBRQ14739 615 aaKnown RBP6.75□□□□□ -1.33
LINC01239-201ENST00000433645 ZDHHC3Q9NYG2 299 aa6.75□□□□□ -1.33
LINC01239-201ENST00000433645 NOVA2Q9UNW9 492 aaKnown RBP6.75□□□□□ -1.33
LINC01239-201ENST00000433645 ACIN1Q9UKV3 1341 aaKnown RBP6.75□□□□□ -1.33
LINC01239-201ENST00000433645 H7C1W4 665 aa6.74□□□□□ -1.33
LINC01239-201ENST00000433645 F11P03951 625 aa6.74□□□□□ -1.33
LINC01239-201ENST00000433645 RHOQP17081 205 aa6.74□□□□□ -1.33
LINC01239-201ENST00000433645 ITGA6P23229 1130 aa6.74□□□□□ -1.33
LINC01239-201ENST00000433645 TNS4Q8IZW8 715 aa6.74□□□□□ -1.33
LINC01239-201ENST00000433645 GPC6Q9Y625 555 aaPredicted RBP6.74□□□□□ -1.33
LINC01239-201ENST00000433645 IGFBP4P22692 258 aa6.73□□□□□ -1.33
LINC01239-201ENST00000433645 PSMA6P60900 246 aaKnown RBP6.73□□□□□ -1.33
LINC01239-201ENST00000433645 TREML4Q6UXN2 200 aa6.73□□□□□ -1.33
LINC01239-201ENST00000433645 SLC9A9Q8IVB4 645 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms