RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 CABP4P57796 275 aa34.3■■■■□ 3.08
TMEM248-205ENST00000433271 RBM6P78332 1123 aaKnown RBP34.3■■■■□ 3.08
TMEM248-205ENST00000433271 EXOSC9Q06265 439 aaKnown RBP34.29■■■■□ 3.08
TMEM248-205ENST00000433271 BTBD11A6QL63 1104 aa34.28■■■■□ 3.08
TMEM248-205ENST00000433271 ILDR1Q86SU0 546 aaPredicted RBP34.28■■■■□ 3.08
TMEM248-205ENST00000433271 SIPA1L3O60292 1781 aaPredicted RBP34.28■■■■□ 3.08
TMEM248-205ENST00000433271 SEPT12Q8IYM1 358 aa34.27■■■■□ 3.08
TMEM248-205ENST00000433271 RGS17Q9UGC6 210 aaPredicted RBP34.26■■■■□ 3.08
TMEM248-205ENST00000433271 CT47B1P0C2W7 299 aaPredicted RBP34.25■■■■□ 3.07
TMEM248-205ENST00000433271 RCAN3Q9UKA8 241 aa34.23■■■■□ 3.07
TMEM248-205ENST00000433271 TOGARAM1Q9Y4F4 1720 aa34.22■■■■□ 3.07
TMEM248-205ENST00000433271 RXRBP28702 533 aa34.2■■■■□ 3.07
TMEM248-205ENST00000433271 C8orf58Q8NAV2 365 aa34.2■■■■□ 3.07
TMEM248-205ENST00000433271 KDM3BQ7LBC6 1761 aa34.2■■■■□ 3.07
TMEM248-205ENST00000433271 TMOD3Q9NYL9 352 aa34.19■■■■□ 3.06
TMEM248-205ENST00000433271 ZNF790Q6PG37 636 aa34.17■■■■□ 3.06
TMEM248-205ENST00000433271 TSPYL6Q8N831 410 aa34.17■■■■□ 3.06
TMEM248-205ENST00000433271 KCNQ3O43525 872 aa34.16■■■■□ 3.06
TMEM248-205ENST00000433271 EIF4A1P60842 406 aaKnown RBP34.16■■■■□ 3.06
TMEM248-205ENST00000433271 TWISTNBQ3B726 338 aaPredicted RBP34.16■■■■□ 3.06
TMEM248-205ENST00000433271 VAMP4O75379 141 aa34.15■■■■□ 3.06
TMEM248-205ENST00000433271 PRIM1P49642 420 aaKnown RBP34.15■■■■□ 3.06
TMEM248-205ENST00000433271 KRT24Q2M2I5 525 aa34.15■■■■□ 3.06
TMEM248-205ENST00000433271 POTEAQ6S8J7 498 aa34.15■■■■□ 3.06
TMEM248-205ENST00000433271 PIGBQ92521 554 aa34.15■■■■□ 3.06
TMEM248-205ENST00000433271 ELL2O00472 640 aaPredicted RBP34.14■■■■□ 3.06
TMEM248-205ENST00000433271 SLC39A6Q13433 755 aa34.14■■■■□ 3.06
TMEM248-205ENST00000433271 ZNF428Q96B54 188 aa34.13■■■■□ 3.05
TMEM248-205ENST00000433271 ITGB4P16144 1822 aa34.13■■■■□ 3.05
TMEM248-205ENST00000433271 BCL9O00512 1426 aa34.13■■■■□ 3.05
TMEM248-205ENST00000433271 DOT1LQ8TEK3 1739 aa34.12■■■■□ 3.05
TMEM248-205ENST00000433271 TTC5Q8N0Z6 440 aa34.12■■■■□ 3.05
TMEM248-205ENST00000433271 SOS1Q07889 1333 aaPredicted RBP34.12■■■■□ 3.05
TMEM248-205ENST00000433271 SYTL4Q96C24 671 aaPredicted RBP34.12■■■■□ 3.05
TMEM248-205ENST00000433271 SUPT16HQ9Y5B9 1047 aaKnown RBP34.12■■■■□ 3.05
TMEM248-205ENST00000433271 RARSP54136 660 aaKnown RBP34.11■■■■□ 3.05
TMEM248-205ENST00000433271 KAT6BQ8WYB5 2073 aa34.1■■■■□ 3.05
TMEM248-205ENST00000433271 HEG1Q9ULI3 1381 aa34.09■■■■□ 3.05
TMEM248-205ENST00000433271 ACSBG1Q96GR2 724 aa34.09■■■■□ 3.05
TMEM248-205ENST00000433271 KRT27Q7Z3Y8 459 aa34.08■■■■□ 3.05
TMEM248-205ENST00000433271 HOXB7P09629 217 aa34.06■■■■□ 3.04
TMEM248-205ENST00000433271 FAM182BQ5T319 152 aa34.06■■■■□ 3.04
TMEM248-205ENST00000433271 ZNF496Q96IT1 587 aaPredicted RBP34.06■■■■□ 3.04
TMEM248-205ENST00000433271 BRWD3Q6RI45 1802 aa34.06■■■■□ 3.04
TMEM248-205ENST00000433271 PAPPAQ13219 1627 aa34.06■■■■□ 3.04
TMEM248-205ENST00000433271 ALDH1L2Q3SY69 923 aa34.05■■■■□ 3.04
TMEM248-205ENST00000433271 FMNL2Q96PY5 1086 aa34.05■■■■□ 3.04
TMEM248-205ENST00000433271 GIGYF1O75420 1035 aaPredicted RBP34.04■■■■□ 3.04
TMEM248-205ENST00000433271 ATG3Q9NT62 314 aa34.04■■■■□ 3.04
TMEM248-205ENST00000433271 ASAP1Q9ULH1 1129 aa34.04■■■■□ 3.04
TMEM248-205ENST00000433271 KCNQ2O43526 872 aa34.03■■■■□ 3.04
TMEM248-205ENST00000433271 BCAR3O75815 825 aa34.03■■■■□ 3.04
TMEM248-205ENST00000433271 SSH1Q8WYL5 1049 aa34.03■■■■□ 3.04
TMEM248-205ENST00000433271 RNF123Q5XPI4 1314 aa34.03■■■■□ 3.04
TMEM248-205ENST00000433271 RGS12O14924 1447 aa34.01■■■■□ 3.04
TMEM248-205ENST00000433271 FAM196AQ6ZSG2 479 aa34.01■■■■□ 3.03
TMEM248-205ENST00000433271 CHMP4AQ9BY43 222 aa34.01■■■■□ 3.03
TMEM248-205ENST00000433271 UBR2Q8IWV8 1755 aa34■■■■□ 3.03
TMEM248-205ENST00000433271 SMC4Q9NTJ3 1288 aa34■■■■□ 3.03
TMEM248-205ENST00000433271 KCPQ6ZWJ8 1503 aa33.99■■■■□ 3.03
TMEM248-205ENST00000433271 SNRPA1P09661 255 aaKnown RBP33.98■■■■□ 3.03
TMEM248-205ENST00000433271 BCL2L13Q9BXK5 485 aa33.98■■■■□ 3.03
TMEM248-205ENST00000433271 CCDC30Q5VVM6 783 aa33.97■■■■□ 3.03
TMEM248-205ENST00000433271 PTCD1O75127 700 aaKnown RBP33.97■■■■□ 3.03
TMEM248-205ENST00000433271 BRPF1P55201 1214 aaPredicted RBP33.97■■■■□ 3.03
TMEM248-205ENST00000433271 RRP1P56182 461 aaKnown RBP33.96■■■■□ 3.03
TMEM248-205ENST00000433271 NHSQ6T4R5 1651 aa33.95■■■■□ 3.03
TMEM248-205ENST00000433271 HDGFL1Q5TGJ6 251 aa33.95■■■■□ 3.03
TMEM248-205ENST00000433271 PRAMEF22A3QJZ6 481 aa33.93■■■■□ 3.02
TMEM248-205ENST00000433271 GOLGA6L2Q8N9W4 650 aaPredicted RBP33.93■■■■□ 3.02
TMEM248-205ENST00000433271 SMARCC1Q92922 1105 aaPredicted RBP33.93■■■■□ 3.02
TMEM248-205ENST00000433271 SBF2Q86WG5 1849 aa33.93■■■■□ 3.02
TMEM248-205ENST00000433271 TCERG1O14776 1098 aaKnown RBP33.93■■■■□ 3.02
TMEM248-205ENST00000433271 EIF2S2P20042 333 aaKnown RBP33.93■■■■□ 3.02
TMEM248-205ENST00000433271 VSIG10Q8N0Z9 540 aa33.93■■■■□ 3.02
TMEM248-205ENST00000433271 MRPL50Q8N5N7 158 aaKnown RBP33.93■■■■□ 3.02
TMEM248-205ENST00000433271 PTF1AQ7RTS3 328 aa33.92■■■■□ 3.02
TMEM248-205ENST00000433271 STK31Q9BXU1 1019 aa33.91■■■■□ 3.02
TMEM248-205ENST00000433271 NECTIN2Q92692 538 aa33.9■■■■□ 3.02
TMEM248-205ENST00000433271 BCL11BQ9C0K0 894 aaPredicted RBP33.9■■■■□ 3.02
TMEM248-205ENST00000433271 RBM42Q9BTD8 480 aaKnown RBP33.9■■■■□ 3.02
TMEM248-205ENST00000433271 KIF16BQ96L93 1317 aa33.88■■■■□ 3.01
TMEM248-205ENST00000433271 C5P01031 1676 aa33.88■■■■□ 3.01
TMEM248-205ENST00000433271 PLIN1O60240 522 aa33.88■■■■□ 3.01
TMEM248-205ENST00000433271 SLC4A2P04920 1241 aa33.88■■■■□ 3.01
TMEM248-205ENST00000433271 USP16Q9Y5T5 823 aa33.88■■■■□ 3.01
TMEM248-205ENST00000433271 PALLDQ8WX93 1383 aa33.87■■■■□ 3.01
TMEM248-205ENST00000433271 FRAT1Q92837 279 aaPredicted RBP33.87■■■■□ 3.01
TMEM248-205ENST00000433271 TEX13AQ9BXU3 409 aaPredicted RBP33.87■■■■□ 3.01
TMEM248-205ENST00000433271 NOB1Q9ULX3 412 aaKnown RBP33.86■■■■□ 3.01
TMEM248-205ENST00000433271 BTAF1O14981 1849 aa33.85■■■■□ 3.01
TMEM248-205ENST00000433271 CANXP27824 592 aaKnown RBP33.85■■■■□ 3.01
TMEM248-205ENST00000433271 SLC4A9Q96Q91 983 aa33.85■■■■□ 3.01
TMEM248-205ENST00000433271 DBF4Q9UBU7 674 aaPredicted RBP33.85■■■■□ 3.01
TMEM248-205ENST00000433271 IPO8O15397 1037 aaKnown RBP33.84■■■■□ 3.01
TMEM248-205ENST00000433271 CHPF2Q9P2E5 772 aa33.84■■■■□ 3.01
TMEM248-205ENST00000433271 CACNA1FO60840 1977 aa33.83■■■■□ 3.01
TMEM248-205ENST00000433271 LOC102724428A0A0B4J2F2 783 aa33.82■■■■□ 3.01
TMEM248-205ENST00000433271 SIK1P57059 783 aa33.82■■■■□ 3.01
TMEM248-205ENST00000433271 ZKSCAN2Q63HK3 967 aa33.82■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms