RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 C19orf44Q9H6X5 657 aa18.28■□□□□ 0.52
RFTN1-203ENST00000432519 ANXA1P04083 346 aa18.28■□□□□ 0.52
RFTN1-203ENST00000432519 CCT4P50991 539 aaKnown RBP18.28■□□□□ 0.52
RFTN1-203ENST00000432519 HDGFL1Q5TGJ6 251 aa18.28■□□□□ 0.52
RFTN1-203ENST00000432519 SLIT3O75094 1523 aa18.28■□□□□ 0.52
RFTN1-203ENST00000432519 EIF4A1P60842 406 aaKnown RBP18.27■□□□□ 0.52
RFTN1-203ENST00000432519 PHRF1Q9P1Y6 1649 aaKnown RBP18.27■□□□□ 0.51
RFTN1-203ENST00000432519 KIF2CQ99661 725 aa18.26■□□□□ 0.51
RFTN1-203ENST00000432519 STRCP1A6NGW2 1772 aa18.26■□□□□ 0.51
RFTN1-203ENST00000432519 RGPD5Q99666 1765 aa18.26■□□□□ 0.51
RFTN1-203ENST00000432519 PNMA6EA0A0J9YXQ4 647 aa18.26■□□□□ 0.51
RFTN1-203ENST00000432519 HSPA2P54652 639 aa18.26■□□□□ 0.51
RFTN1-203ENST00000432519 EXOC6BQ9Y2D4 811 aa18.26■□□□□ 0.51
RFTN1-203ENST00000432519 RBM25P49756 843 aaKnown RBP18.26■□□□□ 0.51
RFTN1-203ENST00000432519 MED1Q15648 1581 aaPredicted RBP18.25■□□□□ 0.51
RFTN1-203ENST00000432519 TMEM94Q12767 1356 aa18.25■□□□□ 0.51
RFTN1-203ENST00000432519 TTC22Q5TAA0 569 aa18.25■□□□□ 0.51
RFTN1-203ENST00000432519 CABLES1Q8TDN4 633 aa18.25■□□□□ 0.51
RFTN1-203ENST00000432519 CHPF2Q9P2E5 772 aa18.24■□□□□ 0.51
RFTN1-203ENST00000432519 PRAMEF22A3QJZ6 481 aa18.24■□□□□ 0.51
RFTN1-203ENST00000432519 AKAP4Q5JQC9 854 aa18.24■□□□□ 0.51
RFTN1-203ENST00000432519 TSHZ3Q63HK5 1081 aa18.24■□□□□ 0.51
RFTN1-203ENST00000432519 RBM42Q9BTD8 480 aaKnown RBP18.24■□□□□ 0.51
RFTN1-203ENST00000432519 GNAI2P04899 355 aa18.23■□□□□ 0.51
RFTN1-203ENST00000432519 USP44Q9H0E7 712 aa18.23■□□□□ 0.51
RFTN1-203ENST00000432519 BABAM1Q9NWV8 329 aa18.23■□□□□ 0.51
RFTN1-203ENST00000432519 CD2BP2O95400 341 aaKnown RBP18.23■□□□□ 0.51
RFTN1-203ENST00000432519 BTBD11A6QL63 1104 aa18.22■□□□□ 0.51
RFTN1-203ENST00000432519 TEFQ10587 303 aa18.22■□□□□ 0.51
RFTN1-203ENST00000432519 PLEKHO1Q53GL0 409 aaPredicted RBP18.22■□□□□ 0.51
RFTN1-203ENST00000432519 LRRFIP2Q9Y608 721 aaKnown RBP18.22■□□□□ 0.51
RFTN1-203ENST00000432519 MST1RQ04912 1400 aa18.22■□□□□ 0.51
RFTN1-203ENST00000432519 NCAPD2Q15021 1401 aa18.21■□□□□ 0.51
RFTN1-203ENST00000432519 LMO7Q8WWI1 1683 aa18.21■□□□□ 0.51
RFTN1-203ENST00000432519 RNMTO43148 476 aaKnown RBP18.21■□□□□ 0.51
RFTN1-203ENST00000432519 KDM3BQ7LBC6 1761 aa18.21■□□□□ 0.51
RFTN1-203ENST00000432519 ERBB3P21860 1342 aa18.21■□□□□ 0.51
RFTN1-203ENST00000432519 CDC45O75419 566 aa18.21■□□□□ 0.51
RFTN1-203ENST00000432519 SDSP20132 328 aa18.21■□□□□ 0.51
RFTN1-203ENST00000432519 CACNA1FO60840 1977 aa18.2■□□□□ 0.5
RFTN1-203ENST00000432519 ATF3P18847 181 aa18.2■□□□□ 0.5
RFTN1-203ENST00000432519 DNAJC5Q9H3Z4 198 aa18.2■□□□□ 0.5
RFTN1-203ENST00000432519 ALS2Q96Q42 1657 aa18.19■□□□□ 0.5
RFTN1-203ENST00000432519 PROSER3Q2NL68 480 aa18.19■□□□□ 0.5
RFTN1-203ENST00000432519 PI4KAP2A4QPH2 592 aa18.18■□□□□ 0.5
RFTN1-203ENST00000432519 C1orf141Q5JVX7 400 aa18.18■□□□□ 0.5
RFTN1-203ENST00000432519 PI4KAP1Q8N8J0 262 aa18.18■□□□□ 0.5
RFTN1-203ENST00000432519 HMMRO75330 724 aa18.18■□□□□ 0.5
RFTN1-203ENST00000432519 CHRNA2Q15822 529 aa18.18■□□□□ 0.5
RFTN1-203ENST00000432519 NBPF7P0C2Y1 421 aaPredicted RBP18.17■□□□□ 0.5
RFTN1-203ENST00000432519 ATP8B2P98198 1209 aa18.17■□□□□ 0.5
RFTN1-203ENST00000432519 AMOTQ4VCS5 1084 aa18.17■□□□□ 0.5
RFTN1-203ENST00000432519 GNAI3P08754 354 aa18.17■□□□□ 0.5
RFTN1-203ENST00000432519 SOS1Q07889 1333 aaPredicted RBP18.17■□□□□ 0.5
RFTN1-203ENST00000432519 KIF1AQ12756 1690 aa18.16■□□□□ 0.5
RFTN1-203ENST00000432519 PDE1AP54750 535 aa18.16■□□□□ 0.5
RFTN1-203ENST00000432519 NLRP2Q9NX02 1062 aa18.16■□□□□ 0.5
RFTN1-203ENST00000432519 CAMTA1Q9Y6Y1 1673 aa18.15■□□□□ 0.5
RFTN1-203ENST00000432519 GIGYF1O75420 1035 aaPredicted RBP18.15■□□□□ 0.5
RFTN1-203ENST00000432519 UBTFL1P0CB47 393 aaPredicted RBP18.15■□□□□ 0.5
RFTN1-203ENST00000432519 SLC39A6Q13433 755 aa18.15■□□□□ 0.5
RFTN1-203ENST00000432519 HSCBQ8IWL3 235 aa18.15■□□□□ 0.5
RFTN1-203ENST00000432519 SALL3Q9BXA9 1300 aa18.14■□□□□ 0.5
RFTN1-203ENST00000432519 ADCY9O60503 1353 aa18.14■□□□□ 0.49
RFTN1-203ENST00000432519 BEND3Q5T5X7 828 aa18.14■□□□□ 0.49
RFTN1-203ENST00000432519 SRCIN1Q9C0H9 1055 aa18.14■□□□□ 0.49
RFTN1-203ENST00000432519 N4BP2Q86UW6 1770 aaPredicted RBP18.13■□□□□ 0.49
RFTN1-203ENST00000432519 GSE1Q14687 1217 aa18.13■□□□□ 0.49
RFTN1-203ENST00000432519 DNAAF4Q8WXU2 420 aa18.13■□□□□ 0.49
RFTN1-203ENST00000432519 LRRCC1Q9C099 1032 aa18.13■□□□□ 0.49
RFTN1-203ENST00000432519 IL1RAPL2Q9NP60 686 aa18.13■□□□□ 0.49
RFTN1-203ENST00000432519 IBTKQ9P2D0 1353 aaPredicted RBP18.13■□□□□ 0.49
RFTN1-203ENST00000432519 PXDNLA1KZ92 1463 aa18.12■□□□□ 0.49
RFTN1-203ENST00000432519 HOXB7P09629 217 aa18.12■□□□□ 0.49
RFTN1-203ENST00000432519 PPP1R42Q7Z4L9 355 aa18.12■□□□□ 0.49
RFTN1-203ENST00000432519 SNX21Q969T3 373 aa18.12■□□□□ 0.49
RFTN1-203ENST00000432519 FOXD4L1Q9NU39 408 aa18.12■□□□□ 0.49
RFTN1-203ENST00000432519 USP26Q9BXU7 913 aa18.12■□□□□ 0.49
RFTN1-203ENST00000432519 HEG1Q9ULI3 1381 aa18.12■□□□□ 0.49
RFTN1-203ENST00000432519 MEGF6O75095 1541 aa18.12■□□□□ 0.49
RFTN1-203ENST00000432519 OSBPL3Q9H4L5 887 aa18.11■□□□□ 0.49
RFTN1-203ENST00000432519 KDM6AO15550 1401 aaPredicted RBP18.1■□□□□ 0.49
RFTN1-203ENST00000432519 NCOA3Q9Y6Q9 1424 aa18.1■□□□□ 0.49
RFTN1-203ENST00000432519 SSH3Q8TE77 659 aa18.1■□□□□ 0.49
RFTN1-203ENST00000432519 DDIT3P35638 169 aa18.1■□□□□ 0.49
RFTN1-203ENST00000432519 UNC5CLQ8IV45 518 aa18.1■□□□□ 0.49
RFTN1-203ENST00000432519 SIPA1L3O60292 1781 aaPredicted RBP18.09■□□□□ 0.49
RFTN1-203ENST00000432519 COL18A1P39060 1754 aa18.09■□□□□ 0.49
RFTN1-203ENST00000432519 NFATC2IPQ8NCF5 419 aa18.09■□□□□ 0.49
RFTN1-203ENST00000432519 RAPGEF4Q8WZA2 1011 aa18.09■□□□□ 0.49
RFTN1-203ENST00000432519 DBF4Q9UBU7 674 aaPredicted RBP18.09■□□□□ 0.49
RFTN1-203ENST00000432519 CWF19L2Q2TBE0 894 aaKnown RBP18.09■□□□□ 0.49
RFTN1-203ENST00000432519 MAP3K2Q9Y2U5 619 aa18.09■□□□□ 0.49
RFTN1-203ENST00000432519 MX1P20591 662 aa18.08■□□□□ 0.49
RFTN1-203ENST00000432519 CADPS2Q86UW7 1296 aa18.08■□□□□ 0.49
RFTN1-203ENST00000432519 NPHP3Q7Z494 1330 aa18.08■□□□□ 0.48
RFTN1-203ENST00000432519 SRGAP3O43295 1099 aa18.08■□□□□ 0.48
RFTN1-203ENST00000432519 CSB-PGBD3P0DP91 1061 aa18.08■□□□□ 0.48
RFTN1-203ENST00000432519 NUTM1Q86Y26 1132 aa18.08■□□□□ 0.48
RFTN1-203ENST00000432519 SURF6O75683 361 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms