RNA–Protein interactions for RNA: ENST00000432436.1

STRC-202, Transcript of stereocilin, humanhuman

APPRIS ALT2 TSL 2

Gene STRC, Length 2,259 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-202ENST00000432436 LNPKQ9C0E8 428 aa17.24■□□□□ 0.35
STRC-202ENST00000432436 OGFRQ9NZT2 677 aa17.24■□□□□ 0.35
STRC-202ENST00000432436 COL3A1P02461 1466 aaPredicted RBP17.24■□□□□ 0.35
STRC-202ENST00000432436 KLHL40Q2TBA0 621 aa17.23■□□□□ 0.35
STRC-202ENST00000432436 NBPF10Q6P3W6 841 aaKnown RBP17.23■□□□□ 0.35
STRC-202ENST00000432436 CEP83Q9Y592 693 aa17.23■□□□□ 0.35
STRC-202ENST00000432436 GOLGA6L22H0YM25 854 aa17.23■□□□□ 0.35
STRC-202ENST00000432436 GOLIM4O00461 696 aa17.23■□□□□ 0.35
STRC-202ENST00000432436 BRPF1P55201 1214 aaPredicted RBP17.23■□□□□ 0.35
STRC-202ENST00000432436 PDCL2Q8N4E4 241 aa17.23■□□□□ 0.35
STRC-202ENST00000432436 CALCOCO1Q9P1Z2 691 aa17.23■□□□□ 0.35
STRC-202ENST00000432436 THEMISQ8N1K5 641 aaPredicted RBP17.22■□□□□ 0.35
STRC-202ENST00000432436 GCC1Q96CN9 775 aa17.22■□□□□ 0.35
STRC-202ENST00000432436 LOC102724159A0A0B4J2E5 919 aa17.22■□□□□ 0.35
STRC-202ENST00000432436 PWP2Q15269 919 aaKnown RBP17.22■□□□□ 0.35
STRC-202ENST00000432436 CASC1Q6TDU7 716 aa17.22■□□□□ 0.35
STRC-202ENST00000432436 MPNDQ8N594 471 aa17.22■□□□□ 0.35
STRC-202ENST00000432436 TULP4Q9NRJ4 1543 aa17.22■□□□□ 0.35
STRC-202ENST00000432436 CD2BP2O95400 341 aaKnown RBP17.21■□□□□ 0.35
STRC-202ENST00000432436 TERF2IPQ9NYB0 399 aa17.21■□□□□ 0.35
STRC-202ENST00000432436 EVC2Q86UK5 1308 aa17.21■□□□□ 0.35
STRC-202ENST00000432436 KIAA2012Q0VF49 1180 aa17.21■□□□□ 0.34
STRC-202ENST00000432436 ZNF428Q96B54 188 aa17.21■□□□□ 0.34
STRC-202ENST00000432436 CREBRFQ8IUR6 639 aa17.19■□□□□ 0.34
STRC-202ENST00000432436 BSDC1Q9NW68 430 aaPredicted RBP17.19■□□□□ 0.34
STRC-202ENST00000432436 EP400NLQ6ZTU2 488 aa17.19■□□□□ 0.34
STRC-202ENST00000432436 ANKRD7Q92527 254 aa17.19■□□□□ 0.34
STRC-202ENST00000432436 RPGRIP1LQ68CZ1 1315 aa17.19■□□□□ 0.34
STRC-202ENST00000432436 ARHGEF28Q8N1W1 1705 aaKnown RBP17.19■□□□□ 0.34
STRC-202ENST00000432436 SSFA2P28290 1259 aa17.18■□□□□ 0.34
STRC-202ENST00000432436 TBC1D9Q6ZT07 1266 aa17.18■□□□□ 0.34
STRC-202ENST00000432436 PPIP5K1Q6PFW1 1433 aa17.18■□□□□ 0.34
STRC-202ENST00000432436 BAG4O95429 457 aaKnown RBP17.18■□□□□ 0.34
STRC-202ENST00000432436 SLFN14P0C7P3 912 aa17.18■□□□□ 0.34
STRC-202ENST00000432436 GAS2L2Q8NHY3 880 aa17.18■□□□□ 0.34
STRC-202ENST00000432436 RNF217Q8TC41 542 aa17.18■□□□□ 0.34
STRC-202ENST00000432436 MYCBPQ99417 103 aaPredicted RBP17.18■□□□□ 0.34
STRC-202ENST00000432436 PIK3R4Q99570 1358 aa17.18■□□□□ 0.34
STRC-202ENST00000432436 U2SURPO15042 1029 aaKnown RBP17.17■□□□□ 0.34
STRC-202ENST00000432436 ANKRD26Q9UPS8 1709 aa17.17■□□□□ 0.34
STRC-202ENST00000432436 ROBO1Q9Y6N7 1651 aa17.17■□□□□ 0.34
STRC-202ENST00000432436 ZBTB7BO15156 539 aaPredicted RBP17.17■□□□□ 0.34
STRC-202ENST00000432436 CAPN2P17655 700 aa17.17■□□□□ 0.34
STRC-202ENST00000432436 NBPF6Q5VWK0 638 aa17.17■□□□□ 0.34
STRC-202ENST00000432436 TMEM132EQ6IEE7 984 aa17.17■□□□□ 0.34
STRC-202ENST00000432436 NBPF5PQ86XG9 351 aaPredicted RBP17.17■□□□□ 0.34
STRC-202ENST00000432436 NBPF4Q96M43 638 aa17.17■□□□□ 0.34
STRC-202ENST00000432436 DDX49Q9Y6V7 483 aaKnown RBP17.17■□□□□ 0.34
STRC-202ENST00000432436 UBR1Q8IWV7 1749 aa17.16■□□□□ 0.34
STRC-202ENST00000432436 SSR1P43307 286 aaKnown RBP17.16■□□□□ 0.34
STRC-202ENST00000432436 ANKRD45Q5TZF3 282 aa17.16■□□□□ 0.34
STRC-202ENST00000432436 TMTC2Q8N394 836 aa17.16■□□□□ 0.34
STRC-202ENST00000432436 BCL2L12Q9HB09 334 aa17.16■□□□□ 0.34
STRC-202ENST00000432436 FAM135BQ49AJ0 1406 aa17.16■□□□□ 0.34
STRC-202ENST00000432436 ARHGAP45Q92619 1136 aa17.16■□□□□ 0.34
STRC-202ENST00000432436 SPDYE4A6NLX3 237 aa17.15■□□□□ 0.34
STRC-202ENST00000432436 ZKSCAN8Q15776 578 aaPredicted RBP17.15■□□□□ 0.34
STRC-202ENST00000432436 TRIM6-TRIM34B2RNG4 842 aa17.14■□□□□ 0.33
STRC-202ENST00000432436 CCDC172P0C7W6 258 aa17.14■□□□□ 0.33
STRC-202ENST00000432436 CT47A1Q5JQC4 288 aaPredicted RBP17.14■□□□□ 0.33
STRC-202ENST00000432436 RBM42Q9BTD8 480 aaKnown RBP17.14■□□□□ 0.33
STRC-202ENST00000432436 TRIM34Q9BYJ4 488 aa17.14■□□□□ 0.33
STRC-202ENST00000432436 FOXD4L1Q9NU39 408 aa17.14■□□□□ 0.33
STRC-202ENST00000432436 PTCH1Q13635 1447 aa17.14■□□□□ 0.33
STRC-202ENST00000432436 CDC45O75419 566 aa17.13■□□□□ 0.33
STRC-202ENST00000432436 NUCB2P80303 420 aa17.13■□□□□ 0.33
STRC-202ENST00000432436 SIRT1Q96EB6 747 aa17.13■□□□□ 0.33
STRC-202ENST00000432436 A0A1W2PP64 1363 aa17.13■□□□□ 0.33
STRC-202ENST00000432436 PNPLA6Q8IY17 1366 aa17.13■□□□□ 0.33
STRC-202ENST00000432436 CHGAP10645 457 aaKnown RBP17.13■□□□□ 0.33
STRC-202ENST00000432436 NCAPGQ9BPX3 1015 aa17.13■□□□□ 0.33
STRC-202ENST00000432436 RBM28Q9NW13 759 aaKnown RBP17.13■□□□□ 0.33
STRC-202ENST00000432436 CYP2E1P05181 493 aaPredicted RBP17.12■□□□□ 0.33
STRC-202ENST00000432436 RABEP1Q15276 862 aa17.12■□□□□ 0.33
STRC-202ENST00000432436 CDC42BPGQ6DT37 1551 aa17.12■□□□□ 0.33
STRC-202ENST00000432436 PIBF1Q8WXW3 757 aa17.12■□□□□ 0.33
STRC-202ENST00000432436 SYCP1Q15431 976 aa17.11■□□□□ 0.33
STRC-202ENST00000432436 U2AF2P26368 475 aaKnown RBP eCLIP17.1■□□□□ 0.33
STRC-202ENST00000432436 ARID4AP29374 1257 aaPredicted RBP17.1■□□□□ 0.33
STRC-202ENST00000432436 RBSNQ9H1K0 784 aa17.1■□□□□ 0.33
STRC-202ENST00000432436 TERF2Q15554 542 aa17.1■□□□□ 0.33
STRC-202ENST00000432436 CCDC96Q2M329 555 aa17.1■□□□□ 0.33
STRC-202ENST00000432436 HSP90AB4PQ58FF6 505 aa17.1■□□□□ 0.33
STRC-202ENST00000432436 SIRT2Q8IXJ6 389 aa17.1■□□□□ 0.33
STRC-202ENST00000432436 ZBTB9Q96C00 473 aa17.1■□□□□ 0.33
STRC-202ENST00000432436 CABP2Q9NPB3 220 aa17.1■□□□□ 0.33
STRC-202ENST00000432436 AK9Q5TCS8 1911 aa17.1■□□□□ 0.33
STRC-202ENST00000432436 DIAPH1O60610 1272 aaKnown RBP17.09■□□□□ 0.33
STRC-202ENST00000432436 MRPL50Q8N5N7 158 aaKnown RBP17.09■□□□□ 0.33
STRC-202ENST00000432436 LMBRD1Q9NUN5 540 aa17.09■□□□□ 0.33
STRC-202ENST00000432436 STK26Q9P289 416 aa17.09■□□□□ 0.33
STRC-202ENST00000432436 CTIFO43310 598 aaKnown RBP17.09■□□□□ 0.33
STRC-202ENST00000432436 FCHSD2O94868 740 aa17.09■□□□□ 0.33
STRC-202ENST00000432436 ZSCAN23Q3MJ62 389 aa17.09■□□□□ 0.33
STRC-202ENST00000432436 GGNBP2Q9H3C7 697 aa17.09■□□□□ 0.33
STRC-202ENST00000432436 ABCC3O15438 1527 aa17.08■□□□□ 0.33
STRC-202ENST00000432436 CTR9Q6PD62 1173 aa17.08■□□□□ 0.33
STRC-202ENST00000432436 UPF1Q92900 1129 aaKnown RBP eCLIP17.08■□□□□ 0.33
STRC-202ENST00000432436 DIAPH3Q9NSV4 1193 aa17.08■□□□□ 0.33
STRC-202ENST00000432436 ABCC4O15439 1325 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms