RNA–Protein interactions for RNA: ENST00000432093.1

LSP1-209, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 5

Gene LSP1, Length 968 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-209ENST00000432093 SMIM5Q71RC9 77 aa23.11■■□□□ 1.29
LSP1-209ENST00000432093 SCN11AQ9UI33 1791 aa23.11■■□□□ 1.29
LSP1-209ENST00000432093 ERVV-2B6SEH9 535 aa23.1■■□□□ 1.29
LSP1-209ENST00000432093 HMGB2P26583 209 aaKnown RBP23.1■■□□□ 1.29
LSP1-209ENST00000432093 ATP6V1AP38606 617 aa23.1■■□□□ 1.29
LSP1-209ENST00000432093 CABP4P57796 275 aa23.1■■□□□ 1.29
LSP1-209ENST00000432093 LINC00116Q8NCU8 138 aa23.1■■□□□ 1.29
LSP1-209ENST00000432093 DIAPH1O60610 1272 aaKnown RBP23.09■■□□□ 1.29
LSP1-209ENST00000432093 ITPK1Q13572 414 aa23.09■■□□□ 1.29
LSP1-209ENST00000432093 RBM42Q9BTD8 480 aaKnown RBP23.09■■□□□ 1.29
LSP1-209ENST00000432093 NPC1L1Q9UHC9 1359 aa23.09■■□□□ 1.29
LSP1-209ENST00000432093 AMIGO3Q86WK7 504 aa23.08■■□□□ 1.29
LSP1-209ENST00000432093 FLAD1Q8NFF5 587 aa23.07■■□□□ 1.28
LSP1-209ENST00000432093 YY1P25490 414 aa23.06■■□□□ 1.28
LSP1-209ENST00000432093 MAP3K5Q99683 1374 aa23.05■■□□□ 1.28
LSP1-209ENST00000432093 U2SURPO15042 1029 aaKnown RBP23.05■■□□□ 1.28
LSP1-209ENST00000432093 GNPATO15228 680 aa23.05■■□□□ 1.28
LSP1-209ENST00000432093 UTRNP46939 3433 aa23.05■■□□□ 1.28
LSP1-209ENST00000432093 COL3A1P02461 1466 aaPredicted RBP23.05■■□□□ 1.28
LSP1-209ENST00000432093 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.04■■□□□ 1.28
LSP1-209ENST00000432093 COL5A3P25940 1745 aaPredicted RBP23.03■■□□□ 1.28
LSP1-209ENST00000432093 CHD4Q14839 1912 aa23.02■■□□□ 1.28
LSP1-209ENST00000432093 AKAP4Q5JQC9 854 aa23.02■■□□□ 1.28
LSP1-209ENST00000432093 PELP1Q8IZL8 1130 aaKnown RBP23.02■■□□□ 1.28
LSP1-209ENST00000432093 NFATC2IPQ8NCF5 419 aa23.02■■□□□ 1.28
LSP1-209ENST00000432093 SLC4A9Q96Q91 983 aa23.02■■□□□ 1.28
LSP1-209ENST00000432093 MYH14Q7Z406 1995 aaKnown RBP23.01■■□□□ 1.27
LSP1-209ENST00000432093 ZNF831Q5JPB2 1677 aa23.01■■□□□ 1.27
LSP1-209ENST00000432093 PTCD1O75127 700 aaKnown RBP23.01■■□□□ 1.27
LSP1-209ENST00000432093 SSFA2P28290 1259 aa23.01■■□□□ 1.27
LSP1-209ENST00000432093 NLGN2Q8NFZ4 835 aa23.01■■□□□ 1.27
LSP1-209ENST00000432093 GPR162Q16538 588 aa22.99■■□□□ 1.27
LSP1-209ENST00000432093 MTHFSDQ2M296 383 aaKnown RBP22.99■■□□□ 1.27
LSP1-209ENST00000432093 GOLGB1Q14789 3259 aaKnown RBP22.99■■□□□ 1.27
LSP1-209ENST00000432093 LGR6Q9HBX8 967 aa22.98■■□□□ 1.27
LSP1-209ENST00000432093 CFAP53Q96M91 514 aa22.97■■□□□ 1.27
LSP1-209ENST00000432093 TJP1Q07157 1748 aa22.96■■□□□ 1.27
LSP1-209ENST00000432093 RNMTO43148 476 aaKnown RBP22.96■■□□□ 1.27
LSP1-209ENST00000432093 SLC52A2Q9HAB3 445 aa22.96■■□□□ 1.27
LSP1-209ENST00000432093 RTCBQ9Y3I0 505 aaKnown RBP22.96■■□□□ 1.27
LSP1-209ENST00000432093 MRC1P22897 1456 aa22.94■■□□□ 1.26
LSP1-209ENST00000432093 C4AP0C0L4 1744 aa22.94■■□□□ 1.26
LSP1-209ENST00000432093 CNTNAP4Q9C0A0 1308 aa22.93■■□□□ 1.26
LSP1-209ENST00000432093 PPP2R1AP30153 589 aa22.93■■□□□ 1.26
LSP1-209ENST00000432093 SLC39A6Q13433 755 aa22.92■■□□□ 1.26
LSP1-209ENST00000432093 TRAPPC3LQ5T215 181 aa22.92■■□□□ 1.26
LSP1-209ENST00000432093 ADAMTS7Q9UKP4 1686 aa22.92■■□□□ 1.26
LSP1-209ENST00000432093 RC3H1Q5TC82 1133 aaKnown RBP22.91■■□□□ 1.26
LSP1-209ENST00000432093 CRKLP46109 303 aaKnown RBP22.9■■□□□ 1.26
LSP1-209ENST00000432093 PRKAR2BP31323 418 aa22.89■■□□□ 1.25
LSP1-209ENST00000432093 GAS2L2Q8NHY3 880 aa22.89■■□□□ 1.25
LSP1-209ENST00000432093 ARHGEF1Q92888 912 aaKnown RBP22.89■■□□□ 1.25
LSP1-209ENST00000432093 NUDCQ9Y266 331 aa22.89■■□□□ 1.25
LSP1-209ENST00000432093 CICQ96RK0 1608 aaPredicted RBP22.89■■□□□ 1.25
LSP1-209ENST00000432093 RPS6KA4O75676 772 aa22.88■■□□□ 1.25
LSP1-209ENST00000432093 MMP10P09238 476 aa22.88■■□□□ 1.25
LSP1-209ENST00000432093 U2AF1L5P0DN76 240 aaPredicted RBP22.88■■□□□ 1.25
LSP1-209ENST00000432093 RFC4P35249 363 aa22.88■■□□□ 1.25
LSP1-209ENST00000432093 U2AF1Q01081 240 aaKnown RBP eCLIP22.88■■□□□ 1.25
LSP1-209ENST00000432093 CD2APQ9Y5K6 639 aa22.88■■□□□ 1.25
LSP1-209ENST00000432093 ADRA2BP18089 450 aa22.87■■□□□ 1.25
LSP1-209ENST00000432093 ZEB1P37275 1124 aaPredicted RBP22.87■■□□□ 1.25
LSP1-209ENST00000432093 DNAJC10Q8IXB1 793 aa22.87■■□□□ 1.25
LSP1-209ENST00000432093 WWC3Q9ULE0 1092 aa22.87■■□□□ 1.25
LSP1-209ENST00000432093 KCPQ6ZWJ8 1503 aa22.87■■□□□ 1.25
LSP1-209ENST00000432093 GNAT3A8MTJ3 354 aa22.86■■□□□ 1.25
LSP1-209ENST00000432093 YBX3P16989 372 aaKnown RBP eCLIP22.86■■□□□ 1.25
LSP1-209ENST00000432093 RSPH6AQ9H0K4 717 aa22.86■■□□□ 1.25
LSP1-209ENST00000432093 SIPA1L3O60292 1781 aaPredicted RBP22.86■■□□□ 1.25
LSP1-209ENST00000432093 UBR2Q8IWV8 1755 aa22.86■■□□□ 1.25
LSP1-209ENST00000432093 TEFQ10587 303 aa22.85■■□□□ 1.25
LSP1-209ENST00000432093 PHACTR3Q96KR7 559 aa22.85■■□□□ 1.25
LSP1-209ENST00000432093 TTC5Q8N0Z6 440 aa22.83■■□□□ 1.25
LSP1-209ENST00000432093 IL17REQ8NFR9 667 aa22.83■■□□□ 1.25
LSP1-209ENST00000432093 SRP68Q9UHB9 627 aaKnown RBP22.83■■□□□ 1.25
LSP1-209ENST00000432093 GYS1P13807 737 aa22.82■■□□□ 1.24
LSP1-209ENST00000432093 INTS5Q6P9B9 1019 aaKnown RBP22.82■■□□□ 1.24
LSP1-209ENST00000432093 NLGN1Q8N2Q7 840 aa22.82■■□□□ 1.24
LSP1-209ENST00000432093 CCDC87Q9NVE4 849 aa22.82■■□□□ 1.24
LSP1-209ENST00000432093 N4BP2Q86UW6 1770 aaPredicted RBP22.81■■□□□ 1.24
LSP1-209ENST00000432093 KIF13BQ9NQT8 1826 aa22.8■■□□□ 1.24
LSP1-209ENST00000432093 GRIN3BO60391 1043 aa22.79■■□□□ 1.24
LSP1-209ENST00000432093 CYP19A1P11511 503 aaPredicted RBP22.79■■□□□ 1.24
LSP1-209ENST00000432093 ZNF784Q8NCA9 323 aaPredicted RBP22.79■■□□□ 1.24
LSP1-209ENST00000432093 PARP3Q9Y6F1 533 aa22.78■■□□□ 1.24
LSP1-209ENST00000432093 USP42Q9H9J4 1324 aaKnown RBP22.78■■□□□ 1.24
LSP1-209ENST00000432093 ZBTB1Q9Y2K1 713 aa22.77■■□□□ 1.24
LSP1-209ENST00000432093 SOS1Q07889 1333 aaPredicted RBP22.77■■□□□ 1.24
LSP1-209ENST00000432093 DLG5Q8TDM6 1919 aa22.76■■□□□ 1.23
LSP1-209ENST00000432093 FCHSD2O94868 740 aa22.76■■□□□ 1.23
LSP1-209ENST00000432093 FKBP8Q14318 412 aa22.76■■□□□ 1.23
LSP1-209ENST00000432093 ZNF496Q96IT1 587 aaPredicted RBP22.76■■□□□ 1.23
LSP1-209ENST00000432093 KIAA1551Q9HCM1 1747 aa22.76■■□□□ 1.23
LSP1-209ENST00000432093 ZPR1O75312 459 aa22.75■■□□□ 1.23
LSP1-209ENST00000432093 CANXP27824 592 aaKnown RBP22.75■■□□□ 1.23
LSP1-209ENST00000432093 ZNF790Q6PG37 636 aa22.75■■□□□ 1.23
LSP1-209ENST00000432093 VSIG10Q8N0Z9 540 aa22.75■■□□□ 1.23
LSP1-209ENST00000432093 RTF1Q92541 710 aaKnown RBP22.75■■□□□ 1.23
LSP1-209ENST00000432093 COL15A1P39059 1388 aa22.75■■□□□ 1.23
LSP1-209ENST00000432093 C10orf71Q711Q0 1435 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms