RNA–Protein interactions for RNA: ENST00000431927.5

TTC39A-210, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 5

Gene TTC39A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-210ENST00000431927 UBR3Q6ZT12 1888 aa13.89□□□□□ -0.19
TTC39A-210ENST00000431927 FCHSD2O94868 740 aa13.88□□□□□ -0.19
TTC39A-210ENST00000431927 HTRA3P83110 453 aa13.88□□□□□ -0.19
TTC39A-210ENST00000431927 CNGB1Q14028 1251 aaPredicted RBP13.88□□□□□ -0.19
TTC39A-210ENST00000431927 C4BP0C0L5 1744 aa13.87□□□□□ -0.19
TTC39A-210ENST00000431927 FLT4P35916 1363 aa13.87□□□□□ -0.19
TTC39A-210ENST00000431927 MEGF6O75095 1541 aa13.87□□□□□ -0.19
TTC39A-210ENST00000431927 TNNT2P45379 298 aaPredicted RBP13.87□□□□□ -0.19
TTC39A-210ENST00000431927 FAM9BQ8IZU0 186 aa13.87□□□□□ -0.19
TTC39A-210ENST00000431927 RBM46Q8TBY0 533 aaKnown RBP13.87□□□□□ -0.19
TTC39A-210ENST00000431927 IP6K1Q92551 441 aa13.87□□□□□ -0.19
TTC39A-210ENST00000431927 ADAMTS8Q9UP79 889 aa13.87□□□□□ -0.19
TTC39A-210ENST00000431927 KIAA1551Q9HCM1 1747 aa13.87□□□□□ -0.19
TTC39A-210ENST00000431927 IL13P35225 146 aa13.86□□□□□ -0.19
TTC39A-210ENST00000431927 FLAD1Q8NFF5 587 aa13.86□□□□□ -0.19
TTC39A-210ENST00000431927 COL3A1P02461 1466 aaPredicted RBP13.86□□□□□ -0.19
TTC39A-210ENST00000431927 MAP3K19Q56UN5 1328 aa13.85□□□□□ -0.19
TTC39A-210ENST00000431927 KIF13BQ9NQT8 1826 aa13.85□□□□□ -0.19
TTC39A-210ENST00000431927 CENPBP07199 599 aaPredicted RBP13.84□□□□□ -0.19
TTC39A-210ENST00000431927 AMPHP49418 695 aa13.84□□□□□ -0.19
TTC39A-210ENST00000431927 FSTL1Q12841 308 aa13.84□□□□□ -0.19
TTC39A-210ENST00000431927 ZCRB1Q8TBF4 217 aaKnown RBP13.84□□□□□ -0.19
TTC39A-210ENST00000431927 PLEKHG2Q9H7P9 1386 aa13.83□□□□□ -0.19
TTC39A-210ENST00000431927 AMIGO3Q86WK7 504 aa13.83□□□□□ -0.2
TTC39A-210ENST00000431927 RUNDC1Q96C34 613 aa13.83□□□□□ -0.2
TTC39A-210ENST00000431927 LTV1Q96GA3 475 aaPredicted RBP13.83□□□□□ -0.2
TTC39A-210ENST00000431927 NMRK2Q9NPI5 230 aa13.83□□□□□ -0.2
TTC39A-210ENST00000431927 EMILIN1Q9Y6C2 1016 aa13.83□□□□□ -0.2
TTC39A-210ENST00000431927 ZBED9Q6R2W3 1325 aa13.83□□□□□ -0.2
TTC39A-210ENST00000431927 PXDNLA1KZ92 1463 aa13.82□□□□□ -0.2
TTC39A-210ENST00000431927 N4BP2Q86UW6 1770 aaPredicted RBP13.82□□□□□ -0.2
TTC39A-210ENST00000431927 HOXC9P31274 260 aa13.82□□□□□ -0.2
TTC39A-210ENST00000431927 RRS1Q15050 365 aaKnown RBP13.82□□□□□ -0.2
TTC39A-210ENST00000431927 PALLDQ8WX93 1383 aa13.82□□□□□ -0.2
TTC39A-210ENST00000431927 CCDC27Q2M243 656 aa13.81□□□□□ -0.2
TTC39A-210ENST00000431927 PKD1L3Q7Z443 1732 aa13.81□□□□□ -0.2
TTC39A-210ENST00000431927 ITGB4P16144 1822 aa13.8□□□□□ -0.2
TTC39A-210ENST00000431927 HSPA1AP0DMV8 641 aaKnown RBP13.8□□□□□ -0.2
TTC39A-210ENST00000431927 HSPA1BP0DMV9 641 aaKnown RBP13.8□□□□□ -0.2
TTC39A-210ENST00000431927 U2AF1L5P0DN76 240 aaPredicted RBP13.8□□□□□ -0.2
TTC39A-210ENST00000431927 U2AF1Q01081 240 aaKnown RBP eCLIP13.8□□□□□ -0.2
TTC39A-210ENST00000431927 BRCA1P38398 1863 aaKnown RBP13.8□□□□□ -0.2
TTC39A-210ENST00000431927 PPM1GO15355 546 aaPredicted RBP13.79□□□□□ -0.2
TTC39A-210ENST00000431927 NEFMP07197 916 aa13.79□□□□□ -0.2
TTC39A-210ENST00000431927 HMGB2P26583 209 aaKnown RBP13.79□□□□□ -0.2
TTC39A-210ENST00000431927 HNRNPUQ00839 825 aaKnown RBP eCLIP13.79□□□□□ -0.2
TTC39A-210ENST00000431927 EIF4A2Q14240 407 aaKnown RBP13.79□□□□□ -0.2
TTC39A-210ENST00000431927 HSP90AB2PQ58FF8 381 aa13.79□□□□□ -0.2
TTC39A-210ENST00000431927 AK7Q96M32 723 aa13.79□□□□□ -0.2
TTC39A-210ENST00000431927 PLEKHF1Q96S99 279 aa13.79□□□□□ -0.2
TTC39A-210ENST00000431927 C10orf71Q711Q0 1435 aa13.79□□□□□ -0.2
TTC39A-210ENST00000431927 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.78□□□□□ -0.2
TTC39A-210ENST00000431927 PHF14O94880 888 aa13.78□□□□□ -0.2
TTC39A-210ENST00000431927 FBLN1P23142 703 aa13.78□□□□□ -0.2
TTC39A-210ENST00000431927 SMIM5Q71RC9 77 aa13.78□□□□□ -0.2
TTC39A-210ENST00000431927 KDRP35968 1356 aa13.78□□□□□ -0.2
TTC39A-210ENST00000431927 TNRC6CQ9HCJ0 1690 aaKnown RBP13.77□□□□□ -0.21
TTC39A-210ENST00000431927 ARFGEF1Q9Y6D6 1849 aa13.76□□□□□ -0.21
TTC39A-210ENST00000431927 U2SURPO15042 1029 aaKnown RBP13.76□□□□□ -0.21
TTC39A-210ENST00000431927 SSFA2P28290 1259 aa13.76□□□□□ -0.21
TTC39A-210ENST00000431927 RSPH6AQ9H0K4 717 aa13.76□□□□□ -0.21
TTC39A-210ENST00000431927 C16orf71Q8IYS4 520 aaPredicted RBP13.75□□□□□ -0.21
TTC39A-210ENST00000431927 BCS1LQ9Y276 419 aa13.75□□□□□ -0.21
TTC39A-210ENST00000431927 NCAPD2Q15021 1401 aa13.74□□□□□ -0.21
TTC39A-210ENST00000431927 PCDH11XQ9BZA7 1347 aa13.74□□□□□ -0.21
TTC39A-210ENST00000431927 PCDH11YQ9BZA8 1340 aa13.74□□□□□ -0.21
TTC39A-210ENST00000431927 NBPF6Q5VWK0 638 aa13.74□□□□□ -0.21
TTC39A-210ENST00000431927 MPRIPQ6WCQ1 1025 aa13.74□□□□□ -0.21
TTC39A-210ENST00000431927 WDR63Q8IWG1 891 aa13.74□□□□□ -0.21
TTC39A-210ENST00000431927 NBPF4Q96M43 638 aa13.74□□□□□ -0.21
TTC39A-210ENST00000431927 EYA1Q99502 592 aa13.74□□□□□ -0.21
TTC39A-210ENST00000431927 KCPQ6ZWJ8 1503 aa13.74□□□□□ -0.21
TTC39A-210ENST00000431927 ZNF521Q96K83 1311 aa13.73□□□□□ -0.21
TTC39A-210ENST00000431927 HTATSF1O43719 755 aaKnown RBP13.73□□□□□ -0.21
TTC39A-210ENST00000431927 MMP10P09238 476 aa13.73□□□□□ -0.21
TTC39A-210ENST00000431927 ARHGAP27Q6ZUM4 889 aa13.73□□□□□ -0.21
TTC39A-210ENST00000431927 USHBP1Q8N6Y0 703 aa13.73□□□□□ -0.21
TTC39A-210ENST00000431927 SMARCC1Q92922 1105 aaPredicted RBP13.73□□□□□ -0.21
TTC39A-210ENST00000431927 MAPK8IP3Q9UPT6 1336 aa13.72□□□□□ -0.21
TTC39A-210ENST00000431927 APAF1O14727 1248 aa13.72□□□□□ -0.21
TTC39A-210ENST00000431927 LMOD3Q0VAK6 560 aa13.72□□□□□ -0.21
TTC39A-210ENST00000431927 LINC00116Q8NCU8 138 aa13.72□□□□□ -0.21
TTC39A-210ENST00000431927 RAPGEF4Q8WZA2 1011 aa13.72□□□□□ -0.21
TTC39A-210ENST00000431927 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.72□□□□□ -0.21
TTC39A-210ENST00000431927 C4AP0C0L4 1744 aa13.72□□□□□ -0.21
TTC39A-210ENST00000431927 A0A0G2JLW4 131 aa13.71□□□□□ -0.21
TTC39A-210ENST00000431927 TMPOP42166 694 aaKnown RBP13.71□□□□□ -0.21
TTC39A-210ENST00000431927 TGFB2P61812 414 aa13.71□□□□□ -0.21
TTC39A-210ENST00000431927 CALD1Q05682 793 aaKnown RBP13.71□□□□□ -0.21
TTC39A-210ENST00000431927 C9orf131Q5VYM1 1079 aa13.71□□□□□ -0.21
TTC39A-210ENST00000431927 SULT6B1Q6IMI4 303 aa13.71□□□□□ -0.21
TTC39A-210ENST00000431927 YTHDC1Q96MU7 727 aaKnown RBP13.71□□□□□ -0.21
TTC39A-210ENST00000431927 IL16Q14005 1332 aa13.7□□□□□ -0.22
TTC39A-210ENST00000431927 SBF1O95248 1867 aa13.7□□□□□ -0.22
TTC39A-210ENST00000431927 GNPATO15228 680 aa13.7□□□□□ -0.22
TTC39A-210ENST00000431927 TATP17735 454 aaPredicted RBP13.7□□□□□ -0.22
TTC39A-210ENST00000431927 NFE2L2Q16236 605 aa13.7□□□□□ -0.22
TTC39A-210ENST00000431927 AMOTQ4VCS5 1084 aa13.7□□□□□ -0.22
TTC39A-210ENST00000431927 KDM2BQ8NHM5 1336 aa13.69□□□□□ -0.22
TTC39A-210ENST00000431927 CYP27B1O15528 508 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms