RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 DDX17Q92841 729 aaKnown RBP13.96□□□□□ -0.17
CLDN4-202ENST00000431918 SPATA31D1Q6ZQQ2 1576 aa13.96□□□□□ -0.17
CLDN4-202ENST00000431918 GOLGA6L3A6NEY3 463 aa13.96□□□□□ -0.17
CLDN4-202ENST00000431918 PLEKHM2Q8IWE5 1019 aa13.96□□□□□ -0.17
CLDN4-202ENST00000431918 IL17REQ8NFR9 667 aa13.96□□□□□ -0.17
CLDN4-202ENST00000431918 CHPF2Q9P2E5 772 aa13.96□□□□□ -0.17
CLDN4-202ENST00000431918 PIK3R4Q99570 1358 aa13.96□□□□□ -0.17
CLDN4-202ENST00000431918 SDSP20132 328 aa13.95□□□□□ -0.18
CLDN4-202ENST00000431918 TTC22Q5TAA0 569 aa13.95□□□□□ -0.18
CLDN4-202ENST00000431918 NEK4P51957 841 aa13.95□□□□□ -0.18
CLDN4-202ENST00000431918 NEXNQ0ZGT2 675 aa13.95□□□□□ -0.18
CLDN4-202ENST00000431918 COL3A1P02461 1466 aaPredicted RBP13.94□□□□□ -0.18
CLDN4-202ENST00000431918 K7ELQ4 463 aaPredicted RBP13.94□□□□□ -0.18
CLDN4-202ENST00000431918 L1TD1Q5T7N2 865 aaKnown RBP13.94□□□□□ -0.18
CLDN4-202ENST00000431918 SHPRHQ149N8 1683 aa13.94□□□□□ -0.18
CLDN4-202ENST00000431918 DLC1Q96QB1 1528 aa13.94□□□□□ -0.18
CLDN4-202ENST00000431918 MAP2P11137 1827 aaKnown RBP13.94□□□□□ -0.18
CLDN4-202ENST00000431918 TATP17735 454 aaPredicted RBP13.94□□□□□ -0.18
CLDN4-202ENST00000431918 IP6K1Q92551 441 aa13.94□□□□□ -0.18
CLDN4-202ENST00000431918 SIL1Q9H173 461 aa13.94□□□□□ -0.18
CLDN4-202ENST00000431918 MAP3K5Q99683 1374 aa13.94□□□□□ -0.18
CLDN4-202ENST00000431918 DDX11L8A8MPP1 907 aa13.94□□□□□ -0.18
CLDN4-202ENST00000431918 TRAK2O60296 914 aa13.94□□□□□ -0.18
CLDN4-202ENST00000431918 DDX58O95786 925 aaKnown RBP13.94□□□□□ -0.18
CLDN4-202ENST00000431918 IFIT2P09913 472 aaKnown RBP13.94□□□□□ -0.18
CLDN4-202ENST00000431918 MCM4P33991 863 aa13.94□□□□□ -0.18
CLDN4-202ENST00000431918 ERC2O15083 957 aa13.93□□□□□ -0.18
CLDN4-202ENST00000431918 SLC39A6Q13433 755 aa13.93□□□□□ -0.18
CLDN4-202ENST00000431918 KCNQ3O43525 872 aa13.93□□□□□ -0.18
CLDN4-202ENST00000431918 MX1P20591 662 aa13.93□□□□□ -0.18
CLDN4-202ENST00000431918 HSPA2P54652 639 aa13.93□□□□□ -0.18
CLDN4-202ENST00000431918 DNAAF4Q8WXU2 420 aa13.92□□□□□ -0.18
CLDN4-202ENST00000431918 DIAPH3Q9NSV4 1193 aa13.92□□□□□ -0.18
CLDN4-202ENST00000431918 DDX49Q9Y6V7 483 aaKnown RBP13.92□□□□□ -0.18
CLDN4-202ENST00000431918 TRIM44Q96DX7 344 aaPredicted RBP13.92□□□□□ -0.18
CLDN4-202ENST00000431918 GPATCH3Q96I76 525 aa13.92□□□□□ -0.18
CLDN4-202ENST00000431918 STRN4Q9NRL3 753 aa13.92□□□□□ -0.18
CLDN4-202ENST00000431918 PTPRUQ92729 1446 aa13.92□□□□□ -0.18
CLDN4-202ENST00000431918 EVA1CP58658 441 aa13.92□□□□□ -0.18
CLDN4-202ENST00000431918 RABEP1Q15276 862 aa13.92□□□□□ -0.18
CLDN4-202ENST00000431918 PPP1R42Q7Z4L9 355 aa13.92□□□□□ -0.18
CLDN4-202ENST00000431918 TAOK2Q9UL54 1235 aa13.92□□□□□ -0.18
CLDN4-202ENST00000431918 ARHGEF10O15013 1369 aa13.92□□□□□ -0.18
CLDN4-202ENST00000431918 PIP4K2AP48426 406 aaPredicted RBP13.92□□□□□ -0.18
CLDN4-202ENST00000431918 G3BP1Q13283 466 aaKnown RBP eCLIP13.91□□□□□ -0.18
CLDN4-202ENST00000431918 CLASRPQ8N2M8 674 aaKnown RBP13.91□□□□□ -0.18
CLDN4-202ENST00000431918 IGSF1Q8N6C5 1336 aa13.91□□□□□ -0.18
CLDN4-202ENST00000431918 HDAC5Q9UQL6 1122 aa13.91□□□□□ -0.18
CLDN4-202ENST00000431918 BRPF1P55201 1214 aaPredicted RBP13.9□□□□□ -0.18
CLDN4-202ENST00000431918 USP32Q8NFA0 1604 aa13.9□□□□□ -0.18
CLDN4-202ENST00000431918 PNMA6EA0A0J9YXQ4 647 aa13.9□□□□□ -0.18
CLDN4-202ENST00000431918 PDE1AP54750 535 aa13.9□□□□□ -0.18
CLDN4-202ENST00000431918 AMOTQ4VCS5 1084 aa13.9□□□□□ -0.18
CLDN4-202ENST00000431918 MCTP1Q6DN14 999 aa13.9□□□□□ -0.18
CLDN4-202ENST00000431918 JARID2Q92833 1246 aaPredicted RBP13.9□□□□□ -0.18
CLDN4-202ENST00000431918 HTATSF1O43719 755 aaKnown RBP13.9□□□□□ -0.18
CLDN4-202ENST00000431918 GSPT1P15170 499 aaKnown RBP13.9□□□□□ -0.18
CLDN4-202ENST00000431918 DDX54Q8TDD1 881 aaKnown RBP13.9□□□□□ -0.18
CLDN4-202ENST00000431918 NAP1L2Q9ULW6 460 aaPredicted RBP13.9□□□□□ -0.18
CLDN4-202ENST00000431918 CDC42BPGQ6DT37 1551 aa13.89□□□□□ -0.19
CLDN4-202ENST00000431918 FGD1P98174 961 aa13.89□□□□□ -0.19
CLDN4-202ENST00000431918 UPF3BQ9BZI7 483 aaKnown RBP13.89□□□□□ -0.19
CLDN4-202ENST00000431918 PRDM11Q9NQV5 511 aa13.89□□□□□ -0.19
CLDN4-202ENST00000431918 MAP3K2Q9Y2U5 619 aa13.89□□□□□ -0.19
CLDN4-202ENST00000431918 TOM1L2Q6ZVM7 507 aa13.89□□□□□ -0.19
CLDN4-202ENST00000431918 DBF4Q9UBU7 674 aaPredicted RBP13.88□□□□□ -0.19
CLDN4-202ENST00000431918 RTL1A6NKG5 1358 aa13.88□□□□□ -0.19
CLDN4-202ENST00000431918 KIAA0232Q92628 1395 aa13.88□□□□□ -0.19
CLDN4-202ENST00000431918 HSP90AB4PQ58FF6 505 aa13.88□□□□□ -0.19
CLDN4-202ENST00000431918 AKAP4Q5JQC9 854 aa13.88□□□□□ -0.19
CLDN4-202ENST00000431918 FAM43AQ8N2R8 423 aa13.88□□□□□ -0.19
CLDN4-202ENST00000431918 CWC27Q6UX04 472 aaKnown RBP13.87□□□□□ -0.19
CLDN4-202ENST00000431918 SPG7Q9UQ90 795 aa13.87□□□□□ -0.19
CLDN4-202ENST00000431918 CABP4P57796 275 aa13.87□□□□□ -0.19
CLDN4-202ENST00000431918 ATP8B2P98198 1209 aa13.87□□□□□ -0.19
CLDN4-202ENST00000431918 SSFA2P28290 1259 aa13.87□□□□□ -0.19
CLDN4-202ENST00000431918 CWF19L2Q2TBE0 894 aaKnown RBP13.87□□□□□ -0.19
CLDN4-202ENST00000431918 TNPO1Q92973 898 aaKnown RBP13.87□□□□□ -0.19
CLDN4-202ENST00000431918 TECPR2O15040 1411 aa13.86□□□□□ -0.19
CLDN4-202ENST00000431918 PTCH1Q13635 1447 aa13.86□□□□□ -0.19
CLDN4-202ENST00000431918 PTCD1O75127 700 aaKnown RBP13.86□□□□□ -0.19
CLDN4-202ENST00000431918 CNTROBQ8N137 903 aa13.86□□□□□ -0.19
CLDN4-202ENST00000431918 SYTL4Q96C24 671 aaPredicted RBP13.86□□□□□ -0.19
CLDN4-202ENST00000431918 C19orf44Q9H6X5 657 aa13.86□□□□□ -0.19
CLDN4-202ENST00000431918 OVOS2A0A0J9YW53 1432 aa13.86□□□□□ -0.19
CLDN4-202ENST00000431918 OVOS2Q6IE36 1432 aa13.86□□□□□ -0.19
CLDN4-202ENST00000431918 AACSQ86V21 672 aa13.85□□□□□ -0.19
CLDN4-202ENST00000431918 KAT6BQ8WYB5 2073 aa13.85□□□□□ -0.19
CLDN4-202ENST00000431918 NBPF7P0C2Y1 421 aaPredicted RBP13.85□□□□□ -0.19
CLDN4-202ENST00000431918 NFATC2IPQ8NCF5 419 aa13.85□□□□□ -0.19
CLDN4-202ENST00000431918 KIF1BPQ96EK5 621 aa13.85□□□□□ -0.19
CLDN4-202ENST00000431918 LARP6Q9BRS8 491 aaKnown RBP13.85□□□□□ -0.19
CLDN4-202ENST00000431918 PA2G4Q9UQ80 394 aaKnown RBP13.85□□□□□ -0.19
CLDN4-202ENST00000431918 KIF20BQ96Q89 1820 aa13.85□□□□□ -0.19
CLDN4-202ENST00000431918 ADGRB2O60241 1585 aa13.84□□□□□ -0.19
CLDN4-202ENST00000431918 RNMTO43148 476 aaKnown RBP13.84□□□□□ -0.19
CLDN4-202ENST00000431918 RBM25P49756 843 aaKnown RBP13.84□□□□□ -0.19
CLDN4-202ENST00000431918 RHPN1Q8TCX5 695 aa13.84□□□□□ -0.19
CLDN4-202ENST00000431918 MYD88Q99836 296 aa13.84□□□□□ -0.19
CLDN4-202ENST00000431918 EIF4A1P60842 406 aaKnown RBP13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms