RNA–Protein interactions for RNA: ENST00000431473.3

RIMKLA-202, Transcript of ribosomal modification protein rimK like family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIMKLA, Length 8,909 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLA-202ENST00000431473 KRT32Q14532 448 aa13.68□□□□□ -0.22
RIMKLA-202ENST00000431473 TOP1P11387 765 aaKnown RBP13.68□□□□□ -0.22
RIMKLA-202ENST00000431473 GUCY1B3Q02153 619 aa13.68□□□□□ -0.22
RIMKLA-202ENST00000431473 CCDC178Q5BJE1 867 aa13.68□□□□□ -0.22
RIMKLA-202ENST00000431473 ZSCAN25Q6NSZ9 544 aa13.68□□□□□ -0.22
RIMKLA-202ENST00000431473 C9orf84Q5VXU9 1444 aa13.68□□□□□ -0.22
RIMKLA-202ENST00000431473 KIAA1107Q9UPP5 1409 aa13.68□□□□□ -0.22
RIMKLA-202ENST00000431473 NUP88Q99567 741 aaPredicted RBP13.67□□□□□ -0.22
RIMKLA-202ENST00000431473 PRPF40BQ6NWY9 871 aaKnown RBP13.67□□□□□ -0.22
RIMKLA-202ENST00000431473 RNF187Q5TA31 235 aaPredicted RBP13.67□□□□□ -0.22
RIMKLA-202ENST00000431473 ADCY5O95622 1261 aa13.67□□□□□ -0.22
RIMKLA-202ENST00000431473 GDPD2Q9HCC8 539 aa13.67□□□□□ -0.22
RIMKLA-202ENST00000431473 CEP131Q9UPN4 1083 aa13.67□□□□□ -0.22
RIMKLA-202ENST00000431473 KIF2AO00139 706 aaPredicted RBP13.67□□□□□ -0.22
RIMKLA-202ENST00000431473 GTF2F1P35269 517 aaKnown RBP eCLIP13.67□□□□□ -0.22
RIMKLA-202ENST00000431473 RBM5P52756 815 aaKnown RBP eCLIP13.67□□□□□ -0.22
RIMKLA-202ENST00000431473 IMMTQ16891 758 aaKnown RBP13.67□□□□□ -0.22
RIMKLA-202ENST00000431473 STAC3Q96MF2 364 aa13.67□□□□□ -0.22
RIMKLA-202ENST00000431473 USP5P45974 858 aa13.67□□□□□ -0.22
RIMKLA-202ENST00000431473 KIF4BQ2VIQ3 1234 aa13.67□□□□□ -0.22
RIMKLA-202ENST00000431473 TBC1D2Q9BYX2 928 aa13.67□□□□□ -0.22
RIMKLA-202ENST00000431473 BMP2KQ9NSY1 1161 aaPredicted RBP13.67□□□□□ -0.22
RIMKLA-202ENST00000431473 SLFN5Q08AF3 891 aa13.66□□□□□ -0.22
RIMKLA-202ENST00000431473 TXNDC2Q86VQ3 553 aa13.66□□□□□ -0.22
RIMKLA-202ENST00000431473 RBM27Q9P2N5 1060 aaKnown RBP13.66□□□□□ -0.22
RIMKLA-202ENST00000431473 NSD3Q9BZ95 1437 aa13.66□□□□□ -0.22
RIMKLA-202ENST00000431473 CYB5RLQ6IPT4 315 aa13.66□□□□□ -0.22
RIMKLA-202ENST00000431473 ANO10Q9NW15 660 aa13.66□□□□□ -0.22
RIMKLA-202ENST00000431473 IDH1O75874 414 aaKnown RBP13.66□□□□□ -0.22
RIMKLA-202ENST00000431473 MX1P20591 662 aa13.66□□□□□ -0.22
RIMKLA-202ENST00000431473 IFFO1Q0D2I5 559 aa13.66□□□□□ -0.22
RIMKLA-202ENST00000431473 GBP3Q9H0R5 595 aa13.66□□□□□ -0.22
RIMKLA-202ENST00000431473 CALCOCO1Q9P1Z2 691 aa13.66□□□□□ -0.22
RIMKLA-202ENST00000431473 CTNNA3Q9UI47 895 aa13.66□□□□□ -0.22
RIMKLA-202ENST00000431473 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.65□□□□□ -0.22
RIMKLA-202ENST00000431473 IPO4Q8TEX9 1081 aaKnown RBP13.65□□□□□ -0.22
RIMKLA-202ENST00000431473 WASF1Q92558 559 aa13.65□□□□□ -0.22
RIMKLA-202ENST00000431473 PTPN23Q9H3S7 1636 aa13.65□□□□□ -0.22
RIMKLA-202ENST00000431473 LRP2BPQ9P2M1 347 aa13.65□□□□□ -0.22
RIMKLA-202ENST00000431473 LUZP1Q86V48 1076 aa13.65□□□□□ -0.22
RIMKLA-202ENST00000431473 ZNF76P36508 570 aa13.65□□□□□ -0.22
RIMKLA-202ENST00000431473 ZNF530Q6P9A1 599 aaPredicted RBP13.64□□□□□ -0.23
RIMKLA-202ENST00000431473 CCDC91Q7Z6B0 441 aa13.64□□□□□ -0.23
RIMKLA-202ENST00000431473 PLEKHH2Q8IVE3 1493 aa13.64□□□□□ -0.23
RIMKLA-202ENST00000431473 MCM3P25205 808 aa13.64□□□□□ -0.23
RIMKLA-202ENST00000431473 CPLX3Q8WVH0 158 aa13.64□□□□□ -0.23
RIMKLA-202ENST00000431473 AIDAQ96BJ3 306 aa13.64□□□□□ -0.23
RIMKLA-202ENST00000431473 U3KPZ7 1027 aaPredicted RBP13.64□□□□□ -0.23
RIMKLA-202ENST00000431473 IGF1RP08069 1367 aa13.64□□□□□ -0.23
RIMKLA-202ENST00000431473 TMPOP42166 694 aaKnown RBP13.63□□□□□ -0.23
RIMKLA-202ENST00000431473 CTR9Q6PD62 1173 aa13.63□□□□□ -0.23
RIMKLA-202ENST00000431473 UBE4AQ14139 1066 aa13.63□□□□□ -0.23
RIMKLA-202ENST00000431473 ISM2Q6H9L7 571 aa13.63□□□□□ -0.23
RIMKLA-202ENST00000431473 CACNA2D4Q7Z3S7 1137 aa13.63□□□□□ -0.23
RIMKLA-202ENST00000431473 THUMPD2Q9BTF0 503 aaKnown RBP13.63□□□□□ -0.23
RIMKLA-202ENST00000431473 TATP17735 454 aaPredicted RBP13.63□□□□□ -0.23
RIMKLA-202ENST00000431473 TMC6Q7Z403 805 aa13.63□□□□□ -0.23
RIMKLA-202ENST00000431473 BOLA2Q9H3K6 86 aa13.63□□□□□ -0.23
RIMKLA-202ENST00000431473 MPHOSPH10O00566 681 aaKnown RBP13.63□□□□□ -0.23
RIMKLA-202ENST00000431473 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.63□□□□□ -0.23
RIMKLA-202ENST00000431473 POLA1P09884 1462 aaPredicted RBP13.63□□□□□ -0.23
RIMKLA-202ENST00000431473 BIN1O00499 593 aa13.63□□□□□ -0.23
RIMKLA-202ENST00000431473 PLEKHH1Q9ULM0 1364 aa13.63□□□□□ -0.23
RIMKLA-202ENST00000431473 SCAND2PQ9GZW5 306 aaPredicted RBP13.62□□□□□ -0.23
RIMKLA-202ENST00000431473 MCM10Q7L590 875 aa13.62□□□□□ -0.23
RIMKLA-202ENST00000431473 CCDC82Q8N4S0 544 aa13.62□□□□□ -0.23
RIMKLA-202ENST00000431473 C8orf76Q96K31 380 aa13.62□□□□□ -0.23
RIMKLA-202ENST00000431473 LMAN1P49257 510 aa13.62□□□□□ -0.23
RIMKLA-202ENST00000431473 FKBP15Q5T1M5 1219 aa13.62□□□□□ -0.23
RIMKLA-202ENST00000431473 NF2P35240 595 aa13.62□□□□□ -0.23
RIMKLA-202ENST00000431473 CEP135Q66GS9 1140 aa13.61□□□□□ -0.23
RIMKLA-202ENST00000431473 CCT2P78371 535 aaKnown RBP13.61□□□□□ -0.23
RIMKLA-202ENST00000431473 PDIA4P13667 645 aaKnown RBP13.61□□□□□ -0.23
RIMKLA-202ENST00000431473 AFAP1Q8N556 730 aa13.61□□□□□ -0.23
RIMKLA-202ENST00000431473 SEC63Q9UGP8 760 aaKnown RBP13.61□□□□□ -0.23
RIMKLA-202ENST00000431473 ZSCAN23Q3MJ62 389 aa13.61□□□□□ -0.23
RIMKLA-202ENST00000431473 CTNNBL1Q8WYA6 563 aaPredicted RBP13.61□□□□□ -0.23
RIMKLA-202ENST00000431473 ZNF830Q96NB3 372 aaPredicted RBP13.61□□□□□ -0.23
RIMKLA-202ENST00000431473 ANKRD30BQ9BXX2 1392 aa13.61□□□□□ -0.23
RIMKLA-202ENST00000431473 GSTTP1A0A1W2PQM5 241 aa13.6□□□□□ -0.23
RIMKLA-202ENST00000431473 MINDY4BA8MYZ0 360 aa13.6□□□□□ -0.23
RIMKLA-202ENST00000431473 SNW1Q13573 536 aaKnown RBP13.6□□□□□ -0.23
RIMKLA-202ENST00000431473 ABCF2Q9UG63 623 aa13.6□□□□□ -0.23
RIMKLA-202ENST00000431473 CNNM3Q8NE01 707 aa13.6□□□□□ -0.23
RIMKLA-202ENST00000431473 KIF1BPQ96EK5 621 aa13.6□□□□□ -0.23
RIMKLA-202ENST00000431473 SSH1Q8WYL5 1049 aa13.6□□□□□ -0.23
RIMKLA-202ENST00000431473 PPP1R12BO60237 982 aaPredicted RBP13.6□□□□□ -0.23
RIMKLA-202ENST00000431473 UBA5Q9GZZ9 404 aa13.6□□□□□ -0.23
RIMKLA-202ENST00000431473 ZSWIM4Q9H7M6 989 aa13.6□□□□□ -0.23
RIMKLA-202ENST00000431473 ZSCAN29Q8IWY8 852 aaPredicted RBP13.6□□□□□ -0.23
RIMKLA-202ENST00000431473 STX1AQ16623 288 aa13.6□□□□□ -0.23
RIMKLA-202ENST00000431473 DYNC1I1O14576 645 aa13.6□□□□□ -0.23
RIMKLA-202ENST00000431473 RAB11FIP3O75154 756 aa13.59□□□□□ -0.23
RIMKLA-202ENST00000431473 GJB2P29033 226 aa13.59□□□□□ -0.23
RIMKLA-202ENST00000431473 SRRTQ9BXP5 876 aaKnown RBP13.59□□□□□ -0.23
RIMKLA-202ENST00000431473 CEP126Q9P2H0 1117 aa13.59□□□□□ -0.23
RIMKLA-202ENST00000431473 PPP1R1BQ9UD71 204 aaPredicted RBP13.59□□□□□ -0.23
RIMKLA-202ENST00000431473 GNAT3A8MTJ3 354 aa13.59□□□□□ -0.23
RIMKLA-202ENST00000431473 ZMYND15Q9H091 742 aa13.59□□□□□ -0.23
RIMKLA-202ENST00000431473 MACROD2A1Z1Q3 448 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms