RNA–Protein interactions for RNA: ENST00000431460.1

TRERNA1-201, translation regulatory long non-coding RNA 1, humanhuman

TSL 2 BASIC

Gene TRERNA1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERNA1-201ENST00000431460 QSER1Q2KHR3 1735 aa15.94■□□□□ 0.14
TRERNA1-201ENST00000431460 MYBBP1AQ9BQG0 1328 aaKnown RBP15.94■□□□□ 0.14
TRERNA1-201ENST00000431460 ATP6V1AP38606 617 aa15.93■□□□□ 0.14
TRERNA1-201ENST00000431460 MSL1Q68DK7 614 aa15.93■□□□□ 0.14
TRERNA1-201ENST00000431460 KLHL34Q8N239 644 aa15.93■□□□□ 0.14
TRERNA1-201ENST00000431460 LINC00116Q8NCU8 138 aa15.93■□□□□ 0.14
TRERNA1-201ENST00000431460 TAF1LQ8IZX4 1826 aa15.93■□□□□ 0.14
TRERNA1-201ENST00000431460 ITPK1Q13572 414 aa15.92■□□□□ 0.14
TRERNA1-201ENST00000431460 MTHFSDQ2M296 383 aaKnown RBP15.92■□□□□ 0.14
TRERNA1-201ENST00000431460 AKAP4Q5JQC9 854 aa15.92■□□□□ 0.14
TRERNA1-201ENST00000431460 COL23A1Q86Y22 540 aaPredicted RBP15.92■□□□□ 0.14
TRERNA1-201ENST00000431460 NFATC2IPQ8NCF5 419 aa15.92■□□□□ 0.14
TRERNA1-201ENST00000431460 ANP32CO43423 234 aa15.9■□□□□ 0.14
TRERNA1-201ENST00000431460 PTCD1O75127 700 aaKnown RBP15.9■□□□□ 0.14
TRERNA1-201ENST00000431460 AMIGO3Q86WK7 504 aa15.9■□□□□ 0.14
TRERNA1-201ENST00000431460 ARXQ96QS3 562 aa15.9■□□□□ 0.14
TRERNA1-201ENST00000431460 SGIP1Q9BQI5 828 aa15.9■□□□□ 0.14
TRERNA1-201ENST00000431460 FHDC1Q9C0D6 1143 aaPredicted RBP15.9■□□□□ 0.14
TRERNA1-201ENST00000431460 LGR6Q9HBX8 967 aa15.9■□□□□ 0.14
TRERNA1-201ENST00000431460 GNPATO15228 680 aa15.89■□□□□ 0.13
TRERNA1-201ENST00000431460 U2AF1L5P0DN76 240 aaPredicted RBP15.89■□□□□ 0.13
TRERNA1-201ENST00000431460 POLD1P28340 1107 aa15.89■□□□□ 0.13
TRERNA1-201ENST00000431460 PRKAR2BP31323 418 aa15.89■□□□□ 0.13
TRERNA1-201ENST00000431460 U2AF1Q01081 240 aaKnown RBP eCLIP15.89■□□□□ 0.13
TRERNA1-201ENST00000431460 SLC16A10Q8TF71 515 aa15.89■□□□□ 0.13
TRERNA1-201ENST00000431460 NUDCQ9Y266 331 aa15.89■□□□□ 0.13
TRERNA1-201ENST00000431460 SCN11AQ9UI33 1791 aa15.89■□□□□ 0.13
TRERNA1-201ENST00000431460 RNMTO43148 476 aaKnown RBP15.88■□□□□ 0.13
TRERNA1-201ENST00000431460 SLC4A9Q96Q91 983 aa15.88■□□□□ 0.13
TRERNA1-201ENST00000431460 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.87■□□□□ 0.13
TRERNA1-201ENST00000431460 SLC52A2Q9HAB3 445 aa15.87■□□□□ 0.13
TRERNA1-201ENST00000431460 HMGB2P26583 209 aaKnown RBP15.86■□□□□ 0.13
TRERNA1-201ENST00000431460 RSPH6AQ9H0K4 717 aa15.86■□□□□ 0.13
TRERNA1-201ENST00000431460 UBR3Q6ZT12 1888 aa15.86■□□□□ 0.13
TRERNA1-201ENST00000431460 MAP3K5Q99683 1374 aa15.86■□□□□ 0.13
TRERNA1-201ENST00000431460 MRC1P22897 1456 aa15.85■□□□□ 0.13
TRERNA1-201ENST00000431460 SLC39A6Q13433 755 aa15.85■□□□□ 0.13
TRERNA1-201ENST00000431460 FLAD1Q8NFF5 587 aa15.85■□□□□ 0.13
TRERNA1-201ENST00000431460 GAS2L2Q8NHY3 880 aa15.85■□□□□ 0.13
TRERNA1-201ENST00000431460 PHACTR3Q96KR7 559 aa15.85■□□□□ 0.13
TRERNA1-201ENST00000431460 SYT17Q9BSW7 474 aa15.85■□□□□ 0.13
TRERNA1-201ENST00000431460 VIRMAQ69YN4 1812 aaKnown RBP15.84■□□□□ 0.13
TRERNA1-201ENST00000431460 COL5A3P25940 1745 aaPredicted RBP15.83■□□□□ 0.13
TRERNA1-201ENST00000431460 DCAF8L1A6NGE4 600 aa15.83■□□□□ 0.12
TRERNA1-201ENST00000431460 GNAT3A8MTJ3 354 aa15.83■□□□□ 0.12
TRERNA1-201ENST00000431460 SSFA2P28290 1259 aa15.83■□□□□ 0.12
TRERNA1-201ENST00000431460 TJP1Q07157 1748 aa15.82■□□□□ 0.12
TRERNA1-201ENST00000431460 TEFQ10587 303 aa15.82■□□□□ 0.12
TRERNA1-201ENST00000431460 RTCBQ9Y3I0 505 aaKnown RBP15.82■□□□□ 0.12
TRERNA1-201ENST00000431460 ADAMTS7Q9UKP4 1686 aa15.82■□□□□ 0.12
TRERNA1-201ENST00000431460 COL24A1Q17RW2 1714 aa15.81■□□□□ 0.12
TRERNA1-201ENST00000431460 ZNF831Q5JPB2 1677 aa15.81■□□□□ 0.12
TRERNA1-201ENST00000431460 DIEXFQ68CQ4 756 aaKnown RBP15.81■□□□□ 0.12
TRERNA1-201ENST00000431460 KCPQ6ZWJ8 1503 aa15.8■□□□□ 0.12
TRERNA1-201ENST00000431460 CNTNAP4Q9C0A0 1308 aa15.8■□□□□ 0.12
TRERNA1-201ENST00000431460 FCHSD2O94868 740 aa15.8■□□□□ 0.12
TRERNA1-201ENST00000431460 CRKLP46109 303 aaKnown RBP15.8■□□□□ 0.12
TRERNA1-201ENST00000431460 DNAJC10Q8IXB1 793 aa15.8■□□□□ 0.12
TRERNA1-201ENST00000431460 PELP1Q8IZL8 1130 aaKnown RBP15.8■□□□□ 0.12
TRERNA1-201ENST00000431460 IL17REQ8NFR9 667 aa15.8■□□□□ 0.12
TRERNA1-201ENST00000431460 TRAPPC3LQ5T215 181 aa15.79■□□□□ 0.12
TRERNA1-201ENST00000431460 TTC5Q8N0Z6 440 aa15.79■□□□□ 0.12
TRERNA1-201ENST00000431460 NLGN2Q8NFZ4 835 aa15.79■□□□□ 0.12
TRERNA1-201ENST00000431460 RPS6KA4O75676 772 aa15.77■□□□□ 0.12
TRERNA1-201ENST00000431460 RFC4P35249 363 aa15.77■□□□□ 0.12
TRERNA1-201ENST00000431460 DCTN1Q14203 1278 aa15.77■□□□□ 0.12
TRERNA1-201ENST00000431460 RC3H1Q5TC82 1133 aaKnown RBP15.77■□□□□ 0.12
TRERNA1-201ENST00000431460 MCM10Q7L590 875 aa15.77■□□□□ 0.12
TRERNA1-201ENST00000431460 RTF1Q92541 710 aaKnown RBP15.77■□□□□ 0.12
TRERNA1-201ENST00000431460 ARHGEF1Q92888 912 aaKnown RBP15.77■□□□□ 0.12
TRERNA1-201ENST00000431460 NEFMP07197 916 aa15.76■□□□□ 0.11
TRERNA1-201ENST00000431460 CCDC184Q52MB2 194 aa15.76■□□□□ 0.11
TRERNA1-201ENST00000431460 C4AP0C0L4 1744 aa15.76■□□□□ 0.11
TRERNA1-201ENST00000431460 CICQ96RK0 1608 aaPredicted RBP15.76■□□□□ 0.11
TRERNA1-201ENST00000431460 MYH14Q7Z406 1995 aaKnown RBP15.75■□□□□ 0.11
TRERNA1-201ENST00000431460 WDR43Q15061 677 aaKnown RBP eCLIP15.75■□□□□ 0.11
TRERNA1-201ENST00000431460 PNNQ9H307 717 aaKnown RBP15.75■□□□□ 0.11
TRERNA1-201ENST00000431460 CCDC87Q9NVE4 849 aa15.75■□□□□ 0.11
TRERNA1-201ENST00000431460 SRP68Q9UHB9 627 aaKnown RBP15.75■□□□□ 0.11
TRERNA1-201ENST00000431460 SIPA1L3O60292 1781 aaPredicted RBP15.75■□□□□ 0.11
TRERNA1-201ENST00000431460 UBR2Q8IWV8 1755 aa15.75■□□□□ 0.11
TRERNA1-201ENST00000431460 CEMIPQ8WUJ3 1361 aa15.75■□□□□ 0.11
TRERNA1-201ENST00000431460 BTBD11A6QL63 1104 aa15.74■□□□□ 0.11
TRERNA1-201ENST00000431460 MMP10P09238 476 aa15.74■□□□□ 0.11
TRERNA1-201ENST00000431460 ADRA2BP18089 450 aa15.74■□□□□ 0.11
TRERNA1-201ENST00000431460 GPR162Q16538 588 aa15.74■□□□□ 0.11
TRERNA1-201ENST00000431460 INTS5Q6P9B9 1019 aaKnown RBP15.74■□□□□ 0.11
TRERNA1-201ENST00000431460 ZNF790Q6PG37 636 aa15.74■□□□□ 0.11
TRERNA1-201ENST00000431460 ZNF496Q96IT1 587 aaPredicted RBP15.74■□□□□ 0.11
TRERNA1-201ENST00000431460 MRS2Q9HD23 443 aa15.74■□□□□ 0.11
TRERNA1-201ENST00000431460 WWC3Q9ULE0 1092 aa15.74■□□□□ 0.11
TRERNA1-201ENST00000431460 MAPK8IP3Q9UPT6 1336 aa15.73■□□□□ 0.11
TRERNA1-201ENST00000431460 KCNQ3O43525 872 aa15.73■□□□□ 0.11
TRERNA1-201ENST00000431460 CYP19A1P11511 503 aaPredicted RBP15.73■□□□□ 0.11
TRERNA1-201ENST00000431460 ZBTB1Q9Y2K1 713 aa15.73■□□□□ 0.11
TRERNA1-201ENST00000431460 GYS1P13807 737 aa15.72■□□□□ 0.11
TRERNA1-201ENST00000431460 YY1P25490 414 aa15.72■□□□□ 0.11
TRERNA1-201ENST00000431460 PLEKHF1Q96S99 279 aa15.72■□□□□ 0.11
TRERNA1-201ENST00000431460 ADAMTS8Q9UP79 889 aa15.72■□□□□ 0.11
TRERNA1-201ENST00000431460 HEG1Q9ULI3 1381 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms