RNA–Protein interactions for RNA: ENST00000431120.1

GCSHP3-201, Transcript of glycine cleavage system protein H pseudogene 3, humanhuman

BASIC

Gene GCSHP3, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSHP3-201ENST00000431120 PHF14O94880 888 aa18.54■□□□□ 0.56
GCSHP3-201ENST00000431120 YBX3P16989 372 aaKnown RBP eCLIP18.54■□□□□ 0.56
GCSHP3-201ENST00000431120 MORC1Q86VD1 984 aa18.54■□□□□ 0.56
GCSHP3-201ENST00000431120 C1QTNF8P60827 252 aa18.53■□□□□ 0.56
GCSHP3-201ENST00000431120 AMIGO3Q86WK7 504 aa18.53■□□□□ 0.56
GCSHP3-201ENST00000431120 KNSTRNQ9Y448 316 aa18.53■□□□□ 0.56
GCSHP3-201ENST00000431120 GNPATO15228 680 aa18.52■□□□□ 0.56
GCSHP3-201ENST00000431120 ITPK1Q13572 414 aa18.52■□□□□ 0.56
GCSHP3-201ENST00000431120 ZNF831Q5JPB2 1677 aa18.51■□□□□ 0.55
GCSHP3-201ENST00000431120 ADRA2BP18089 450 aa18.51■□□□□ 0.55
GCSHP3-201ENST00000431120 RC3H1Q5TC82 1133 aaKnown RBP18.51■□□□□ 0.55
GCSHP3-201ENST00000431120 KDRP35968 1356 aa18.51■□□□□ 0.55
GCSHP3-201ENST00000431120 ZNF530Q6P9A1 599 aaPredicted RBP18.5■□□□□ 0.55
GCSHP3-201ENST00000431120 RTCBQ9Y3I0 505 aaKnown RBP18.5■□□□□ 0.55
GCSHP3-201ENST00000431120 GIGYF1O75420 1035 aaPredicted RBP18.49■□□□□ 0.55
GCSHP3-201ENST00000431120 CABP4P57796 275 aa18.49■□□□□ 0.55
GCSHP3-201ENST00000431120 C1orf141Q5JVX7 400 aa18.49■□□□□ 0.55
GCSHP3-201ENST00000431120 MTHFSP49914 203 aa18.48■□□□□ 0.55
GCSHP3-201ENST00000431120 TRAPPC3LQ5T215 181 aa18.48■□□□□ 0.55
GCSHP3-201ENST00000431120 NLGN1Q8N2Q7 840 aa18.48■□□□□ 0.55
GCSHP3-201ENST00000431120 CNTNAP4Q9C0A0 1308 aa18.48■□□□□ 0.55
GCSHP3-201ENST00000431120 RBM42Q9BTD8 480 aaKnown RBP18.47■□□□□ 0.55
GCSHP3-201ENST00000431120 SULT6B1Q6IMI4 303 aa18.46■□□□□ 0.55
GCSHP3-201ENST00000431120 SMIM5Q71RC9 77 aa18.46■□□□□ 0.55
GCSHP3-201ENST00000431120 KDM6AO15550 1401 aaPredicted RBP18.46■□□□□ 0.55
GCSHP3-201ENST00000431120 RPS6KA4O75676 772 aa18.45■□□□□ 0.54
GCSHP3-201ENST00000431120 IL13P35225 146 aa18.45■□□□□ 0.54
GCSHP3-201ENST00000431120 AMER1Q5JTC6 1135 aaPredicted RBP18.45■□□□□ 0.54
GCSHP3-201ENST00000431120 SLC4A9Q96Q91 983 aa18.45■□□□□ 0.54
GCSHP3-201ENST00000431120 MMP10P09238 476 aa18.44■□□□□ 0.54
GCSHP3-201ENST00000431120 AEBP1Q8IUX7 1158 aa18.44■□□□□ 0.54
GCSHP3-201ENST00000431120 SENP3-EIF4A1A0A087X0R7 540 aa18.43■□□□□ 0.54
GCSHP3-201ENST00000431120 TGFB2P61812 414 aa18.43■□□□□ 0.54
GCSHP3-201ENST00000431120 ARHGEF1Q92888 912 aaKnown RBP18.43■□□□□ 0.54
GCSHP3-201ENST00000431120 RFC4P35249 363 aa18.42■□□□□ 0.54
GCSHP3-201ENST00000431120 AKAP4Q5JQC9 854 aa18.42■□□□□ 0.54
GCSHP3-201ENST00000431120 NFATC2IPQ8NCF5 419 aa18.42■□□□□ 0.54
GCSHP3-201ENST00000431120 ATP10DQ9P241 1426 aa18.41■□□□□ 0.54
GCSHP3-201ENST00000431120 KIF7Q2M1P5 1343 aa18.41■□□□□ 0.54
GCSHP3-201ENST00000431120 ADCY9O60503 1353 aa18.41■□□□□ 0.54
GCSHP3-201ENST00000431120 GYS1P13807 737 aa18.4■□□□□ 0.54
GCSHP3-201ENST00000431120 COL5A3P25940 1745 aaPredicted RBP18.4■□□□□ 0.54
GCSHP3-201ENST00000431120 GPBP1L1Q9HC44 474 aaPredicted RBP18.39■□□□□ 0.53
GCSHP3-201ENST00000431120 CCDC87Q9NVE4 849 aa18.39■□□□□ 0.53
GCSHP3-201ENST00000431120 KIF13BQ9NQT8 1826 aa18.38■□□□□ 0.53
GCSHP3-201ENST00000431120 PER1O15534 1290 aaPredicted RBP18.38■□□□□ 0.53
GCSHP3-201ENST00000431120 PTCD1O75127 700 aaKnown RBP18.38■□□□□ 0.53
GCSHP3-201ENST00000431120 PARP3Q9Y6F1 533 aa18.38■□□□□ 0.53
GCSHP3-201ENST00000431120 CRKLP46109 303 aaKnown RBP18.37■□□□□ 0.53
GCSHP3-201ENST00000431120 SLC52A2Q9HAB3 445 aa18.37■□□□□ 0.53
GCSHP3-201ENST00000431120 C10orf71Q711Q0 1435 aa18.37■□□□□ 0.53
GCSHP3-201ENST00000431120 PXDNLA1KZ92 1463 aa18.37■□□□□ 0.53
GCSHP3-201ENST00000431120 CICQ96RK0 1608 aaPredicted RBP18.37■□□□□ 0.53
GCSHP3-201ENST00000431120 MYH14Q7Z406 1995 aaKnown RBP18.36■□□□□ 0.53
GCSHP3-201ENST00000431120 NPC1L1Q9UHC9 1359 aa18.36■□□□□ 0.53
GCSHP3-201ENST00000431120 SCN11AQ9UI33 1791 aa18.35■□□□□ 0.53
GCSHP3-201ENST00000431120 DIAPH1O60610 1272 aaKnown RBP18.34■□□□□ 0.53
GCSHP3-201ENST00000431120 C4AP0C0L4 1744 aa18.34■□□□□ 0.53
GCSHP3-201ENST00000431120 USP42Q9H9J4 1324 aaKnown RBP18.33■□□□□ 0.53
GCSHP3-201ENST00000431120 RNMTO43148 476 aaKnown RBP18.33■□□□□ 0.52
GCSHP3-201ENST00000431120 MRC1P22897 1456 aa18.33■□□□□ 0.52
GCSHP3-201ENST00000431120 A0A0G2JLW4 131 aa18.32■□□□□ 0.52
GCSHP3-201ENST00000431120 INTS5Q6P9B9 1019 aaKnown RBP18.32■□□□□ 0.52
GCSHP3-201ENST00000431120 WWC3Q9ULE0 1092 aa18.32■□□□□ 0.52
GCSHP3-201ENST00000431120 BCS1LQ9Y276 419 aa18.32■□□□□ 0.52
GCSHP3-201ENST00000431120 HMOX1P09601 288 aa18.31■□□□□ 0.52
GCSHP3-201ENST00000431120 VSIG10Q8N0Z9 540 aa18.31■□□□□ 0.52
GCSHP3-201ENST00000431120 LGR6Q9HBX8 967 aa18.31■□□□□ 0.52
GCSHP3-201ENST00000431120 KIAA1551Q9HCM1 1747 aa18.3■□□□□ 0.52
GCSHP3-201ENST00000431120 DPEP1P16444 411 aa18.3■□□□□ 0.52
GCSHP3-201ENST00000431120 MTHFSDQ2M296 383 aaKnown RBP18.3■□□□□ 0.52
GCSHP3-201ENST00000431120 CC2D1BQ5T0F9 858 aaKnown RBP18.3■□□□□ 0.52
GCSHP3-201ENST00000431120 TJP1Q07157 1748 aa18.29■□□□□ 0.52
GCSHP3-201ENST00000431120 ZPR1O75312 459 aa18.29■□□□□ 0.52
GCSHP3-201ENST00000431120 CYP19A1P11511 503 aaPredicted RBP18.29■□□□□ 0.52
GCSHP3-201ENST00000431120 FKBP8Q14318 412 aa18.29■□□□□ 0.52
GCSHP3-201ENST00000431120 DNAJC10Q8IXB1 793 aa18.29■□□□□ 0.52
GCSHP3-201ENST00000431120 PIM2Q9P1W9 311 aa18.29■□□□□ 0.52
GCSHP3-201ENST00000431120 SOS1Q07889 1333 aaPredicted RBP18.28■□□□□ 0.52
GCSHP3-201ENST00000431120 FCHSD2O94868 740 aa18.28■□□□□ 0.52
GCSHP3-201ENST00000431120 TM4SF1P30408 202 aa18.28■□□□□ 0.52
GCSHP3-201ENST00000431120 SRP68Q9UHB9 627 aaKnown RBP18.28■□□□□ 0.52
GCSHP3-201ENST00000431120 ADAMTS7Q9UKP4 1686 aa18.28■□□□□ 0.52
GCSHP3-201ENST00000431120 KCNA3P22001 575 aa18.27■□□□□ 0.52
GCSHP3-201ENST00000431120 ZNF526Q8TF50 670 aaPredicted RBP18.27■□□□□ 0.52
GCSHP3-201ENST00000431120 N4BP2Q86UW6 1770 aaPredicted RBP18.27■□□□□ 0.51
GCSHP3-201ENST00000431120 DDR1Q08345 913 aa18.26■□□□□ 0.51
GCSHP3-201ENST00000431120 ARHGAP27Q6ZUM4 889 aa18.26■□□□□ 0.51
GCSHP3-201ENST00000431120 GAS2L2Q8NHY3 880 aa18.26■□□□□ 0.51
GCSHP3-201ENST00000431120 NARFQ9UHQ1 456 aa18.26■□□□□ 0.51
GCSHP3-201ENST00000431120 POLRMTO00411 1230 aaKnown RBP18.25■□□□□ 0.51
GCSHP3-201ENST00000431120 HSPA6P17066 643 aa18.25■□□□□ 0.51
GCSHP3-201ENST00000431120 SLC39A6Q13433 755 aa18.25■□□□□ 0.51
GCSHP3-201ENST00000431120 DALRD3Q5D0E6 543 aaKnown RBP18.25■□□□□ 0.51
GCSHP3-201ENST00000431120 CEP350Q5VT06 3117 aa18.25■□□□□ 0.51
GCSHP3-201ENST00000431120 BRCA1P38398 1863 aaKnown RBP18.24■□□□□ 0.51
GCSHP3-201ENST00000431120 KCPQ6ZWJ8 1503 aa18.24■□□□□ 0.51
GCSHP3-201ENST00000431120 KIF3CO14782 793 aa18.24■□□□□ 0.51
GCSHP3-201ENST00000431120 STARD3NLO95772 234 aa18.24■□□□□ 0.51
GCSHP3-201ENST00000431120 USPL1Q5W0Q7 1092 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms