RNA–Protein interactions for RNA: ENST00000431116.2

HMGN1P38-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 38, humanhuman

BASIC

Gene HMGN1P38, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P38-201ENST00000431116 KDM6AO15550 1401 aaPredicted RBP13.82□□□□□ -0.2
HMGN1P38-201ENST00000431116 COL5A3P25940 1745 aaPredicted RBP13.82□□□□□ -0.2
HMGN1P38-201ENST00000431116 SCN11AQ9UI33 1791 aa13.82□□□□□ -0.2
HMGN1P38-201ENST00000431116 LOC102724428A0A0B4J2F2 783 aa13.82□□□□□ -0.2
HMGN1P38-201ENST00000431116 SIK1P57059 783 aa13.82□□□□□ -0.2
HMGN1P38-201ENST00000431116 FLAD1Q8NFF5 587 aa13.82□□□□□ -0.2
HMGN1P38-201ENST00000431116 ASAP1Q9ULH1 1129 aa13.82□□□□□ -0.2
HMGN1P38-201ENST00000431116 KDRP35968 1356 aa13.82□□□□□ -0.2
HMGN1P38-201ENST00000431116 ZNF831Q5JPB2 1677 aa13.82□□□□□ -0.2
HMGN1P38-201ENST00000431116 PHF14O94880 888 aa13.81□□□□□ -0.2
HMGN1P38-201ENST00000431116 HSP90AB1P08238 724 aaKnown RBP13.81□□□□□ -0.2
HMGN1P38-201ENST00000431116 AMOTQ4VCS5 1084 aa13.81□□□□□ -0.2
HMGN1P38-201ENST00000431116 SULT6B1Q6IMI4 303 aa13.81□□□□□ -0.2
HMGN1P38-201ENST00000431116 LINC00116Q8NCU8 138 aa13.81□□□□□ -0.2
HMGN1P38-201ENST00000431116 DCAF5Q96JK2 942 aa13.81□□□□□ -0.2
HMGN1P38-201ENST00000431116 IL13P35225 146 aa13.8□□□□□ -0.2
HMGN1P38-201ENST00000431116 ATP6V1AP38606 617 aa13.8□□□□□ -0.2
HMGN1P38-201ENST00000431116 ITPK1Q13572 414 aa13.8□□□□□ -0.2
HMGN1P38-201ENST00000431116 CC2D1BQ5T0F9 858 aaKnown RBP13.8□□□□□ -0.2
HMGN1P38-201ENST00000431116 AMIGO3Q86WK7 504 aa13.8□□□□□ -0.2
HMGN1P38-201ENST00000431116 ATG3Q9NT62 314 aa13.8□□□□□ -0.2
HMGN1P38-201ENST00000431116 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.79□□□□□ -0.2
HMGN1P38-201ENST00000431116 ERVV-2B6SEH9 535 aa13.79□□□□□ -0.2
HMGN1P38-201ENST00000431116 C1orf141Q5JVX7 400 aa13.79□□□□□ -0.2
HMGN1P38-201ENST00000431116 NLGN2Q8NFZ4 835 aa13.79□□□□□ -0.2
HMGN1P38-201ENST00000431116 GNPATO15228 680 aa13.78□□□□□ -0.2
HMGN1P38-201ENST00000431116 PER1O15534 1290 aaPredicted RBP13.78□□□□□ -0.2
HMGN1P38-201ENST00000431116 SLC4A2P04920 1241 aa13.78□□□□□ -0.2
HMGN1P38-201ENST00000431116 SSFA2P28290 1259 aa13.78□□□□□ -0.2
HMGN1P38-201ENST00000431116 MTHFSP49914 203 aa13.78□□□□□ -0.2
HMGN1P38-201ENST00000431116 GPR162Q16538 588 aa13.78□□□□□ -0.2
HMGN1P38-201ENST00000431116 SMIM5Q71RC9 77 aa13.78□□□□□ -0.2
HMGN1P38-201ENST00000431116 PELP1Q8IZL8 1130 aaKnown RBP13.78□□□□□ -0.2
HMGN1P38-201ENST00000431116 CABP4P57796 275 aa13.77□□□□□ -0.21
HMGN1P38-201ENST00000431116 C4AP0C0L4 1744 aa13.76□□□□□ -0.21
HMGN1P38-201ENST00000431116 TJP1Q07157 1748 aa13.76□□□□□ -0.21
HMGN1P38-201ENST00000431116 CNGB1Q14028 1251 aaPredicted RBP13.76□□□□□ -0.21
HMGN1P38-201ENST00000431116 RBM42Q9BTD8 480 aaKnown RBP13.76□□□□□ -0.21
HMGN1P38-201ENST00000431116 MYH14Q7Z406 1995 aaKnown RBP13.76□□□□□ -0.21
HMGN1P38-201ENST00000431116 CICQ96RK0 1608 aaPredicted RBP13.75□□□□□ -0.21
HMGN1P38-201ENST00000431116 COL3A1P02461 1466 aaPredicted RBP13.75□□□□□ -0.21
HMGN1P38-201ENST00000431116 NPC1L1Q9UHC9 1359 aa13.75□□□□□ -0.21
HMGN1P38-201ENST00000431116 HMOX1P09601 288 aa13.75□□□□□ -0.21
HMGN1P38-201ENST00000431116 MRC1P22897 1456 aa13.74□□□□□ -0.21
HMGN1P38-201ENST00000431116 DIAPH1O60610 1272 aaKnown RBP13.74□□□□□ -0.21
HMGN1P38-201ENST00000431116 SLC4A9Q96Q91 983 aa13.74□□□□□ -0.21
HMGN1P38-201ENST00000431116 ADAMTS7Q9UKP4 1686 aa13.73□□□□□ -0.21
HMGN1P38-201ENST00000431116 NFATC2IPQ8NCF5 419 aa13.73□□□□□ -0.21
HMGN1P38-201ENST00000431116 CD2APQ9Y5K6 639 aa13.73□□□□□ -0.21
HMGN1P38-201ENST00000431116 CNTNAP4Q9C0A0 1308 aa13.72□□□□□ -0.21
HMGN1P38-201ENST00000431116 AKAP4Q5JQC9 854 aa13.72□□□□□ -0.21
HMGN1P38-201ENST00000431116 ZNF784Q8NCA9 323 aaPredicted RBP13.72□□□□□ -0.21
HMGN1P38-201ENST00000431116 RTCBQ9Y3I0 505 aaKnown RBP13.72□□□□□ -0.21
HMGN1P38-201ENST00000431116 PTCD1O75127 700 aaKnown RBP13.71□□□□□ -0.21
HMGN1P38-201ENST00000431116 YBX3P16989 372 aaKnown RBP eCLIP13.71□□□□□ -0.21
HMGN1P38-201ENST00000431116 U3KPZ7 1027 aaPredicted RBP13.71□□□□□ -0.21
HMGN1P38-201ENST00000431116 KIF13BQ9NQT8 1826 aa13.71□□□□□ -0.22
HMGN1P38-201ENST00000431116 TRAPPC3LQ5T215 181 aa13.7□□□□□ -0.22
HMGN1P38-201ENST00000431116 UBR2Q8IWV8 1755 aa13.7□□□□□ -0.22
HMGN1P38-201ENST00000431116 U2SURPO15042 1029 aaKnown RBP13.69□□□□□ -0.22
HMGN1P38-201ENST00000431116 MTHFSDQ2M296 383 aaKnown RBP13.69□□□□□ -0.22
HMGN1P38-201ENST00000431116 RC3H1Q5TC82 1133 aaKnown RBP13.69□□□□□ -0.22
HMGN1P38-201ENST00000431116 SLC52A2Q9HAB3 445 aa13.69□□□□□ -0.22
HMGN1P38-201ENST00000431116 UTRNP46939 3433 aa13.69□□□□□ -0.22
HMGN1P38-201ENST00000431116 KIAA1551Q9HCM1 1747 aa13.68□□□□□ -0.22
HMGN1P38-201ENST00000431116 RNMTO43148 476 aaKnown RBP13.68□□□□□ -0.22
HMGN1P38-201ENST00000431116 GRIN3BO60391 1043 aa13.68□□□□□ -0.22
HMGN1P38-201ENST00000431116 MMP10P09238 476 aa13.68□□□□□ -0.22
HMGN1P38-201ENST00000431116 LGR6Q9HBX8 967 aa13.68□□□□□ -0.22
HMGN1P38-201ENST00000431116 KCPQ6ZWJ8 1503 aa13.68□□□□□ -0.22
HMGN1P38-201ENST00000431116 N4BP2Q86UW6 1770 aaPredicted RBP13.68□□□□□ -0.22
HMGN1P38-201ENST00000431116 RPS6KA4O75676 772 aa13.67□□□□□ -0.22
HMGN1P38-201ENST00000431116 RFC4P35249 363 aa13.67□□□□□ -0.22
HMGN1P38-201ENST00000431116 CRKLP46109 303 aaKnown RBP13.67□□□□□ -0.22
HMGN1P38-201ENST00000431116 ARHGEF1Q92888 912 aaKnown RBP13.67□□□□□ -0.22
HMGN1P38-201ENST00000431116 WWC3Q9ULE0 1092 aa13.67□□□□□ -0.22
HMGN1P38-201ENST00000431116 SIPA1L3O60292 1781 aaPredicted RBP13.67□□□□□ -0.22
HMGN1P38-201ENST00000431116 NLGN1Q8N2Q7 840 aa13.66□□□□□ -0.22
HMGN1P38-201ENST00000431116 C10orf71Q711Q0 1435 aa13.65□□□□□ -0.22
HMGN1P38-201ENST00000431116 GYS1P13807 737 aa13.65□□□□□ -0.22
HMGN1P38-201ENST00000431116 SLC39A6Q13433 755 aa13.65□□□□□ -0.22
HMGN1P38-201ENST00000431116 DNAJC10Q8IXB1 793 aa13.65□□□□□ -0.22
HMGN1P38-201ENST00000431116 CFAP53Q96M91 514 aa13.65□□□□□ -0.22
HMGN1P38-201ENST00000431116 BRCA1P38398 1863 aaKnown RBP13.64□□□□□ -0.23
HMGN1P38-201ENST00000431116 PXDNLA1KZ92 1463 aa13.64□□□□□ -0.23
HMGN1P38-201ENST00000431116 GAS2L2Q8NHY3 880 aa13.64□□□□□ -0.23
HMGN1P38-201ENST00000431116 CCDC87Q9NVE4 849 aa13.63□□□□□ -0.23
HMGN1P38-201ENST00000431116 SRP68Q9UHB9 627 aaKnown RBP13.63□□□□□ -0.23
HMGN1P38-201ENST00000431116 USP42Q9H9J4 1324 aaKnown RBP13.63□□□□□ -0.23
HMGN1P38-201ENST00000431116 GNAT3A8MTJ3 354 aa13.62□□□□□ -0.23
HMGN1P38-201ENST00000431116 PPP2R1AP30153 589 aa13.62□□□□□ -0.23
HMGN1P38-201ENST00000431116 PRKAR2BP31323 418 aa13.62□□□□□ -0.23
HMGN1P38-201ENST00000431116 INTS5Q6P9B9 1019 aaKnown RBP13.62□□□□□ -0.23
HMGN1P38-201ENST00000431116 PARP3Q9Y6F1 533 aa13.62□□□□□ -0.23
HMGN1P38-201ENST00000431116 TEFQ10587 303 aa13.61□□□□□ -0.23
HMGN1P38-201ENST00000431116 TTC5Q8N0Z6 440 aa13.61□□□□□ -0.23
HMGN1P38-201ENST00000431116 ATP10DQ9P241 1426 aa13.61□□□□□ -0.23
HMGN1P38-201ENST00000431116 SOS1Q07889 1333 aaPredicted RBP13.61□□□□□ -0.23
HMGN1P38-201ENST00000431116 COL15A1P39059 1388 aa13.6□□□□□ -0.23
HMGN1P38-201ENST00000431116 CYP19A1P11511 503 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms