RNA–Protein interactions for RNA: ENST00000430825.3

LMBR1-206, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 1,208 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-206ENST00000430825 TRAPPC3LQ5T215 181 aa23.46■■□□□ 1.35
LMBR1-206ENST00000430825 RBM46Q8TBY0 533 aaKnown RBP23.46■■□□□ 1.35
LMBR1-206ENST00000430825 A0A0G2JLW4 131 aa23.45■■□□□ 1.34
LMBR1-206ENST00000430825 NMRK2Q9NPI5 230 aa23.45■■□□□ 1.34
LMBR1-206ENST00000430825 CCDC87Q9NVE4 849 aa23.45■■□□□ 1.34
LMBR1-206ENST00000430825 RTCBQ9Y3I0 505 aaKnown RBP23.45■■□□□ 1.34
LMBR1-206ENST00000430825 EMILIN1Q9Y6C2 1016 aa23.45■■□□□ 1.34
LMBR1-206ENST00000430825 C10orf71Q711Q0 1435 aa23.44■■□□□ 1.34
LMBR1-206ENST00000430825 C16orf71Q8IYS4 520 aaPredicted RBP23.44■■□□□ 1.34
LMBR1-206ENST00000430825 IFNL2Q8IZJ0 200 aa23.44■■□□□ 1.34
LMBR1-206ENST00000430825 KIF20BQ96Q89 1820 aa23.43■■□□□ 1.34
LMBR1-206ENST00000430825 FCHSD2O94868 740 aa23.43■■□□□ 1.34
LMBR1-206ENST00000430825 ADRA2BP18089 450 aa23.43■■□□□ 1.34
LMBR1-206ENST00000430825 KIAA1551Q9HCM1 1747 aa23.42■■□□□ 1.34
LMBR1-206ENST00000430825 PLEKHG2Q9H7P9 1386 aa23.42■■□□□ 1.34
LMBR1-206ENST00000430825 CDCA8Q53HL2 280 aa23.42■■□□□ 1.34
LMBR1-206ENST00000430825 ATG3Q9NT62 314 aa23.42■■□□□ 1.34
LMBR1-206ENST00000430825 N4BP2Q86UW6 1770 aaPredicted RBP23.42■■□□□ 1.34
LMBR1-206ENST00000430825 PHKG2P15735 406 aa23.41■■□□□ 1.34
LMBR1-206ENST00000430825 DPEP1P16444 411 aa23.41■■□□□ 1.34
LMBR1-206ENST00000430825 FSTL1Q12841 308 aa23.41■■□□□ 1.34
LMBR1-206ENST00000430825 PPM1GO15355 546 aaPredicted RBP23.4■■□□□ 1.34
LMBR1-206ENST00000430825 RC3H1Q5TC82 1133 aaKnown RBP23.4■■□□□ 1.34
LMBR1-206ENST00000430825 KLRG1Q96E93 195 aa23.4■■□□□ 1.34
LMBR1-206ENST00000430825 PARP3Q9Y6F1 533 aa23.4■■□□□ 1.34
LMBR1-206ENST00000430825 WDR90Q96KV7 1748 aa23.39■■□□□ 1.34
LMBR1-206ENST00000430825 WASHC2AQ641Q2 1341 aa23.39■■□□□ 1.34
LMBR1-206ENST00000430825 C9orf131Q5VYM1 1079 aa23.39■■□□□ 1.33
LMBR1-206ENST00000430825 EYA1Q99502 592 aa23.39■■□□□ 1.33
LMBR1-206ENST00000430825 JMYQ8N9B5 988 aa23.38■■□□□ 1.33
LMBR1-206ENST00000430825 ARHGEF1Q92888 912 aaKnown RBP23.38■■□□□ 1.33
LMBR1-206ENST00000430825 KDRP35968 1356 aa23.38■■□□□ 1.33
LMBR1-206ENST00000430825 KDM2BQ8NHM5 1336 aa23.37■■□□□ 1.33
LMBR1-206ENST00000430825 GYS1P13807 737 aa23.37■■□□□ 1.33
LMBR1-206ENST00000430825 RFC4P35249 363 aa23.37■■□□□ 1.33
LMBR1-206ENST00000430825 CNTNAP4Q9C0A0 1308 aa23.36■■□□□ 1.33
LMBR1-206ENST00000430825 C4AP0C0L4 1744 aa23.36■■□□□ 1.33
LMBR1-206ENST00000430825 ERVV-2B6SEH9 535 aa23.35■■□□□ 1.33
LMBR1-206ENST00000430825 RBM42Q9BTD8 480 aaKnown RBP23.35■■□□□ 1.33
LMBR1-206ENST00000430825 CARD14Q9BXL6 1004 aa23.35■■□□□ 1.33
LMBR1-206ENST00000430825 PIM2Q9P1W9 311 aa23.35■■□□□ 1.33
LMBR1-206ENST00000430825 ZNF831Q5JPB2 1677 aa23.35■■□□□ 1.33
LMBR1-206ENST00000430825 RPS6KA4O75676 772 aa23.34■■□□□ 1.33
LMBR1-206ENST00000430825 KCNA3P22001 575 aa23.34■■□□□ 1.33
LMBR1-206ENST00000430825 COL13A1Q5TAT6 717 aaPredicted RBP23.34■■□□□ 1.33
LMBR1-206ENST00000430825 ANKRD26Q9UPS8 1709 aa23.33■■□□□ 1.33
LMBR1-206ENST00000430825 BRCA1P38398 1863 aaKnown RBP23.33■■□□□ 1.33
LMBR1-206ENST00000430825 SLC4A9Q96Q91 983 aa23.33■■□□□ 1.33
LMBR1-206ENST00000430825 ARFGEF1Q9Y6D6 1849 aa23.32■■□□□ 1.32
LMBR1-206ENST00000430825 HSP90AB1P08238 724 aaKnown RBP23.32■■□□□ 1.32
LMBR1-206ENST00000430825 DALRD3Q5D0E6 543 aaKnown RBP23.32■■□□□ 1.32
LMBR1-206ENST00000430825 DCAF5Q96JK2 942 aa23.32■■□□□ 1.32
LMBR1-206ENST00000430825 HTRA3P83110 453 aa23.31■■□□□ 1.32
LMBR1-206ENST00000430825 RNF181Q9P0P0 153 aa23.3■■□□□ 1.32
LMBR1-206ENST00000430825 KCPQ6ZWJ8 1503 aa23.29■■□□□ 1.32
LMBR1-206ENST00000430825 POTEDQ86YR6 584 aa23.29■■□□□ 1.32
LMBR1-206ENST00000430825 SMC1BQ8NDV3 1235 aa23.28■■□□□ 1.32
LMBR1-206ENST00000430825 RRAGCQ9HB90 399 aa23.28■■□□□ 1.32
LMBR1-206ENST00000430825 POLKQ9UBT6 870 aa23.28■■□□□ 1.32
LMBR1-206ENST00000430825 COL5A3P25940 1745 aaPredicted RBP23.28■■□□□ 1.32
LMBR1-206ENST00000430825 TNS4Q8IZW8 715 aa23.27■■□□□ 1.32
LMBR1-206ENST00000430825 CABP4P57796 275 aa23.25■■□□□ 1.31
LMBR1-206ENST00000430825 EIF4A2Q14240 407 aaKnown RBP23.25■■□□□ 1.31
LMBR1-206ENST00000430825 CAPN15O75808 1086 aa23.24■■□□□ 1.31
LMBR1-206ENST00000430825 PLEKHO1Q53GL0 409 aaPredicted RBP23.24■■□□□ 1.31
LMBR1-206ENST00000430825 TNRC6CQ9HCJ0 1690 aaKnown RBP23.24■■□□□ 1.31
LMBR1-206ENST00000430825 ZC3H4Q9UPT8 1303 aaKnown RBP23.24■■□□□ 1.31
LMBR1-206ENST00000430825 PRELPP51888 382 aa23.23■■□□□ 1.31
LMBR1-206ENST00000430825 USP42Q9H9J4 1324 aaKnown RBP23.23■■□□□ 1.31
LMBR1-206ENST00000430825 MYH14Q7Z406 1995 aaKnown RBP23.23■■□□□ 1.31
LMBR1-206ENST00000430825 CRKLP46109 303 aaKnown RBP23.22■■□□□ 1.31
LMBR1-206ENST00000430825 DDR1Q08345 913 aa23.22■■□□□ 1.31
LMBR1-206ENST00000430825 FKBP8Q14318 412 aa23.22■■□□□ 1.31
LMBR1-206ENST00000430825 AMOTQ4VCS5 1084 aa23.21■■□□□ 1.31
LMBR1-206ENST00000430825 SRP68Q9UHB9 627 aaKnown RBP23.21■■□□□ 1.31
LMBR1-206ENST00000430825 PTCD1O75127 700 aaKnown RBP23.2■■□□□ 1.3
LMBR1-206ENST00000430825 CHRNA5P30532 468 aa23.2■■□□□ 1.3
LMBR1-206ENST00000430825 ZNF530Q6P9A1 599 aaPredicted RBP23.2■■□□□ 1.3
LMBR1-206ENST00000430825 KDM6AO15550 1401 aaPredicted RBP23.19■■□□□ 1.3
LMBR1-206ENST00000430825 SBF1O95248 1867 aa23.18■■□□□ 1.3
LMBR1-206ENST00000430825 MTHFSP49914 203 aa23.18■■□□□ 1.3
LMBR1-206ENST00000430825 POLRMTO00411 1230 aaKnown RBP23.17■■□□□ 1.3
LMBR1-206ENST00000430825 VEGFAP15692 232 aaPredicted RBP23.17■■□□□ 1.3
LMBR1-206ENST00000430825 TM4SF1P30408 202 aa23.17■■□□□ 1.3
LMBR1-206ENST00000430825 PCNTO95613 3336 aa23.16■■□□□ 1.3
LMBR1-206ENST00000430825 LMNB1P20700 586 aa23.16■■□□□ 1.3
LMBR1-206ENST00000430825 C1orf141Q5JVX7 400 aa23.16■■□□□ 1.3
LMBR1-206ENST00000430825 GLTPD2A6NH11 291 aa23.15■■□□□ 1.3
LMBR1-206ENST00000430825 ZPR1O75312 459 aa23.15■■□□□ 1.3
LMBR1-206ENST00000430825 TNNT2P45379 298 aaPredicted RBP23.15■■□□□ 1.3
LMBR1-206ENST00000430825 NFATC2IPQ8NCF5 419 aa23.15■■□□□ 1.3
LMBR1-206ENST00000430825 HSPA1AP0DMV8 641 aaKnown RBP23.13■■□□□ 1.29
LMBR1-206ENST00000430825 HSPA1BP0DMV9 641 aaKnown RBP23.13■■□□□ 1.29
LMBR1-206ENST00000430825 INTS5Q6P9B9 1019 aaKnown RBP23.13■■□□□ 1.29
LMBR1-206ENST00000430825 RASSF7Q02833 373 aa23.12■■□□□ 1.29
LMBR1-206ENST00000430825 USPL1Q5W0Q7 1092 aa23.1■■□□□ 1.29
LMBR1-206ENST00000430825 TJP1Q07157 1748 aa23.09■■□□□ 1.29
LMBR1-206ENST00000430825 TTLL6Q8N841 843 aa23.09■■□□□ 1.29
LMBR1-206ENST00000430825 TRIM26Q12899 539 aaPredicted RBP23.08■■□□□ 1.29
LMBR1-206ENST00000430825 SOS1Q07889 1333 aaPredicted RBP23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms