RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	LOC102724428	A0A0B4J2F2	783 aa		24.21	■■□□□ 1.47
MRPL28-203	ENST00000429738	SSFA2	P28290	1259 aa		24.21	■■□□□ 1.47
MRPL28-203	ENST00000429738	SIK1	P57059	783 aa		24.21	■■□□□ 1.47
MRPL28-203	ENST00000429738	IFFO2	Q5TF58	517 aa		24.21	■■□□□ 1.47
MRPL28-203	ENST00000429738	IFNL2	Q8IZJ0	200 aa		24.21	■■□□□ 1.47
MRPL28-203	ENST00000429738	UBR3	Q6ZT12	1888 aa		24.21	■■□□□ 1.47
MRPL28-203	ENST00000429738	ADCY9	O60503	1353 aa		24.2	■■□□□ 1.46
MRPL28-203	ENST00000429738	LINC00116	Q8NCU8	138 aa		24.19	■■□□□ 1.46
MRPL28-203	ENST00000429738	TMOD3	Q9NYL9	352 aa		24.18	■■□□□ 1.46
MRPL28-203	ENST00000429738	ZNF526	Q8TF50	670 aa	Predicted RBP	24.17	■■□□□ 1.46
MRPL28-203	ENST00000429738	WWC3	Q9ULE0	1092 aa		24.16	■■□□□ 1.46
MRPL28-203	ENST00000429738	ASAP1	Q9ULH1	1129 aa		24.16	■■□□□ 1.46
MRPL28-203	ENST00000429738	KDR	P35968	1356 aa		24.16	■■□□□ 1.46
MRPL28-203	ENST00000429738	HSPA6	P17066	643 aa		24.15	■■□□□ 1.46
MRPL28-203	ENST00000429738	IL13	P35225	146 aa		24.15	■■□□□ 1.46
MRPL28-203	ENST00000429738	GNPAT	O15228	680 aa		24.14	■■□□□ 1.45
MRPL28-203	ENST00000429738	ATP6V1A	P38606	617 aa		24.14	■■□□□ 1.45
MRPL28-203	ENST00000429738	ITPK1	Q13572	414 aa		24.14	■■□□□ 1.45
MRPL28-203	ENST00000429738	AEBP1	Q8IUX7	1158 aa		24.14	■■□□□ 1.45
MRPL28-203	ENST00000429738	PLEKHO1	Q53GL0	409 aa	Predicted RBP	24.13	■■□□□ 1.45
MRPL28-203	ENST00000429738	NPC1L1	Q9UHC9	1359 aa		24.13	■■□□□ 1.45
MRPL28-203	ENST00000429738	AMOT	Q4VCS5	1084 aa		24.12	■■□□□ 1.45
MRPL28-203	ENST00000429738	ATG3	Q9NT62	314 aa		24.11	■■□□□ 1.45
MRPL28-203	ENST00000429738	KDM6A	O15550	1401 aa	Predicted RBP	24.1	■■□□□ 1.45
MRPL28-203	ENST00000429738	HSP90AB1	P08238	724 aa	Known RBP	24.1	■■□□□ 1.45
MRPL28-203	ENST00000429738	MTHFS	P49914	203 aa		24.1	■■□□□ 1.45
MRPL28-203	ENST00000429738	SULT6B1	Q6IMI4	303 aa		24.1	■■□□□ 1.45
MRPL28-203	ENST00000429738	DCAF5	Q96JK2	942 aa		24.1	■■□□□ 1.45
MRPL28-203	ENST00000429738	ERVV-2	B6SEH9	535 aa		24.09	■■□□□ 1.45
MRPL28-203	ENST00000429738	MMP10	P09238	476 aa		24.09	■■□□□ 1.45
MRPL28-203	ENST00000429738	ZNF530	Q6P9A1	599 aa	Predicted RBP	24.09	■■□□□ 1.45
MRPL28-203	ENST00000429738	CC2D1B	Q5T0F9	858 aa	Known RBP	24.08	■■□□□ 1.45
MRPL28-203	ENST00000429738	ZNF831	Q5JPB2	1677 aa		24.08	■■□□□ 1.44
MRPL28-203	ENST00000429738	KIF3C	O14782	793 aa		24.07	■■□□□ 1.44
MRPL28-203	ENST00000429738	TRAPPC3L	Q5T215	181 aa		24.07	■■□□□ 1.44
MRPL28-203	ENST00000429738	TGFB2	P61812	414 aa		24.06	■■□□□ 1.44
MRPL28-203	ENST00000429738	NLGN1	Q8N2Q7	840 aa		24.06	■■□□□ 1.44
MRPL28-203	ENST00000429738	RTCB	Q9Y3I0	505 aa	Known RBP	24.06	■■□□□ 1.44
MRPL28-203	ENST00000429738	SCN11A	Q9UI33	1791 aa		24.04	■■□□□ 1.44
MRPL28-203	ENST00000429738	RC3H1	Q5TC82	1133 aa	Known RBP	24.04	■■□□□ 1.44
MRPL28-203	ENST00000429738	SLC4A9	Q96Q91	983 aa		24.03	■■□□□ 1.44
MRPL28-203	ENST00000429738	COL3A1	P02461	1466 aa	Predicted RBP	24.02	■■□□□ 1.44
MRPL28-203	ENST00000429738	C1orf141	Q5JVX7	400 aa		24.02	■■□□□ 1.44
MRPL28-203	ENST00000429738	PXDNL	A1KZ92	1463 aa		24.01	■■□□□ 1.43
MRPL28-203	ENST00000429738	KIF13B	Q9NQT8	1826 aa		24.01	■■□□□ 1.43
MRPL28-203	ENST00000429738		A0A0G2JLW4	131 aa		24.01	■■□□□ 1.43
MRPL28-203	ENST00000429738	ADRA2B	P18089	450 aa		24.01	■■□□□ 1.43
MRPL28-203	ENST00000429738	ARHGEF1	Q92888	912 aa	Known RBP	24.01	■■□□□ 1.43
MRPL28-203	ENST00000429738	RBM42	Q9BTD8	480 aa	Known RBP	24.01	■■□□□ 1.43
MRPL28-203	ENST00000429738	BCS1L	Q9Y276	419 aa		24.01	■■□□□ 1.43
MRPL28-203	ENST00000429738	CIC	Q96RK0	1608 aa	Predicted RBP	24.01	■■□□□ 1.43
MRPL28-203	ENST00000429738	COL5A3	P25940	1745 aa	Predicted RBP	24.01	■■□□□ 1.43
MRPL28-203	ENST00000429738	VIRMA	Q69YN4	1812 aa	Known RBP	24	■■□□□ 1.43
MRPL28-203	ENST00000429738	DIAPH1	O60610	1272 aa	Known RBP	23.99	■■□□□ 1.43
MRPL28-203	ENST00000429738	CABP4	P57796	275 aa		23.99	■■□□□ 1.43
MRPL28-203	ENST00000429738	RPS6KA4	O75676	772 aa		23.98	■■□□□ 1.43
MRPL28-203	ENST00000429738	HMOX1	P09601	288 aa		23.98	■■□□□ 1.43
MRPL28-203	ENST00000429738	GYS1	P13807	737 aa		23.98	■■□□□ 1.43
MRPL28-203	ENST00000429738	RFC4	P35249	363 aa		23.98	■■□□□ 1.43
MRPL28-203	ENST00000429738	AKAP4	Q5JQC9	854 aa		23.98	■■□□□ 1.43
MRPL28-203	ENST00000429738	ARHGAP27	Q6ZUM4	889 aa		23.98	■■□□□ 1.43
MRPL28-203	ENST00000429738	CCDC87	Q9NVE4	849 aa		23.98	■■□□□ 1.43
MRPL28-203	ENST00000429738	N4BP2	Q86UW6	1770 aa	Predicted RBP	23.98	■■□□□ 1.43
MRPL28-203	ENST00000429738	DPEP1	P16444	411 aa		23.97	■■□□□ 1.43
MRPL28-203	ENST00000429738	CNTNAP4	Q9C0A0	1308 aa		23.97	■■□□□ 1.43
MRPL28-203	ENST00000429738	KIAA1551	Q9HCM1	1747 aa		23.96	■■□□□ 1.43
MRPL28-203	ENST00000429738	ADAMTS7	Q9UKP4	1686 aa		23.96	■■□□□ 1.43
MRPL28-203	ENST00000429738	C10orf71	Q711Q0	1435 aa		23.96	■■□□□ 1.43
MRPL28-203	ENST00000429738	TOMM70	O94826	608 aa		23.96	■■□□□ 1.43
MRPL28-203	ENST00000429738	APLP1	P51693	650 aa		23.96	■■□□□ 1.43
MRPL28-203	ENST00000429738	NFATC2IP	Q8NCF5	419 aa		23.96	■■□□□ 1.43
MRPL28-203	ENST00000429738	PARP3	Q9Y6F1	533 aa		23.96	■■□□□ 1.43
MRPL28-203	ENST00000429738	MRC1	P22897	1456 aa		23.95	■■□□□ 1.42
MRPL28-203	ENST00000429738	MYH14	Q7Z406	1995 aa	Known RBP	23.95	■■□□□ 1.42
MRPL28-203	ENST00000429738	FCHSD2	O94868	740 aa		23.95	■■□□□ 1.42
MRPL28-203	ENST00000429738	CNGB1	Q14028	1251 aa	Predicted RBP	23.92	■■□□□ 1.42
MRPL28-203	ENST00000429738	MTHFSD	Q2M296	383 aa	Known RBP	23.92	■■□□□ 1.42
MRPL28-203	ENST00000429738	C4A	P0C0L4	1744 aa		23.91	■■□□□ 1.42
MRPL28-203	ENST00000429738	TJP1	Q07157	1748 aa		23.91	■■□□□ 1.42
MRPL28-203	ENST00000429738	KCNA3	P22001	575 aa		23.91	■■□□□ 1.42
MRPL28-203	ENST00000429738	SLC52A2	Q9HAB3	445 aa		23.91	■■□□□ 1.42
MRPL28-203	ENST00000429738	LGR6	Q9HBX8	967 aa		23.91	■■□□□ 1.42
MRPL28-203	ENST00000429738	RNMT	O43148	476 aa	Known RBP	23.9	■■□□□ 1.42
MRPL28-203	ENST00000429738	DNAJC5G	Q8N7S2	189 aa		23.9	■■□□□ 1.42
MRPL28-203	ENST00000429738	NMRK2	Q9NPI5	230 aa		23.9	■■□□□ 1.42
MRPL28-203	ENST00000429738	PTCD1	O75127	700 aa	Known RBP	23.89	■■□□□ 1.41
MRPL28-203	ENST00000429738	PIM2	Q9P1W9	311 aa		23.89	■■□□□ 1.41
MRPL28-203	ENST00000429738	C9orf131	Q5VYM1	1079 aa		23.88	■■□□□ 1.41
MRPL28-203	ENST00000429738	BRCA1	P38398	1863 aa	Known RBP	23.87	■■□□□ 1.41
MRPL28-203	ENST00000429738	CRKL	P46109	303 aa	Known RBP	23.87	■■□□□ 1.41
MRPL28-203	ENST00000429738	SRP68	Q9UHB9	627 aa	Known RBP	23.86	■■□□□ 1.41
MRPL28-203	ENST00000429738	U2SURP	O15042	1029 aa	Known RBP	23.85	■■□□□ 1.41
MRPL28-203	ENST00000429738	FKBP8	Q14318	412 aa		23.85	■■□□□ 1.41
MRPL28-203	ENST00000429738	DALRD3	Q5D0E6	543 aa	Known RBP	23.85	■■□□□ 1.41
MRPL28-203	ENST00000429738	RBM46	Q8TBY0	533 aa	Known RBP	23.85	■■□□□ 1.41
MRPL28-203	ENST00000429738	ARFGEF1	Q9Y6D6	1849 aa		23.84	■■□□□ 1.41
MRPL28-203	ENST00000429738	KCP	Q6ZWJ8	1503 aa		23.84	■■□□□ 1.41
MRPL28-203	ENST00000429738	USP42	Q9H9J4	1324 aa	Known RBP	23.84	■■□□□ 1.41
MRPL28-203	ENST00000429738	PPP2R1A	P30153	589 aa		23.83	■■□□□ 1.41
MRPL28-203	ENST00000429738	DDR1	Q08345	913 aa		23.83	■■□□□ 1.41

Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms