RNA–Protein interactions for RNA: ENST00000429574.1

LIN28AP1-201, Transcript of LIN28A pseudogene 1, humanhuman

BASIC

Gene LIN28AP1, Length 405 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AP1-201ENST00000429574 IL13P35225 146 aa25.52■■□□□ 1.68
LIN28AP1-201ENST00000429574 RBM42Q9BTD8 480 aaKnown RBP25.52■■□□□ 1.68
LIN28AP1-201ENST00000429574 ATG3Q9NT62 314 aa25.52■■□□□ 1.68
LIN28AP1-201ENST00000429574 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.49■■□□□ 1.67
LIN28AP1-201ENST00000429574 PER1O15534 1290 aaPredicted RBP25.49■■□□□ 1.67
LIN28AP1-201ENST00000429574 GNPATO15228 680 aa25.48■■□□□ 1.67
LIN28AP1-201ENST00000429574 DIAPH1O60610 1272 aaKnown RBP25.48■■□□□ 1.67
LIN28AP1-201ENST00000429574 SSFA2P28290 1259 aa25.48■■□□□ 1.67
LIN28AP1-201ENST00000429574 LINC00116Q8NCU8 138 aa25.48■■□□□ 1.67
LIN28AP1-201ENST00000429574 COL24A1Q17RW2 1714 aa25.48■■□□□ 1.67
LIN28AP1-201ENST00000429574 HMOX1P09601 288 aa25.45■■□□□ 1.66
LIN28AP1-201ENST00000429574 ITPK1Q13572 414 aa25.45■■□□□ 1.66
LIN28AP1-201ENST00000429574 KDRP35968 1356 aa25.44■■□□□ 1.66
LIN28AP1-201ENST00000429574 NFATC2IPQ8NCF5 419 aa25.44■■□□□ 1.66
LIN28AP1-201ENST00000429574 RTCBQ9Y3I0 505 aaKnown RBP25.44■■□□□ 1.66
LIN28AP1-201ENST00000429574 UBR3Q6ZT12 1888 aa25.43■■□□□ 1.66
LIN28AP1-201ENST00000429574 AKAP4Q5JQC9 854 aa25.43■■□□□ 1.66
LIN28AP1-201ENST00000429574 CHD4Q14839 1912 aa25.42■■□□□ 1.66
LIN28AP1-201ENST00000429574 TRAPPC3LQ5T215 181 aa25.42■■□□□ 1.66
LIN28AP1-201ENST00000429574 KDM6AO15550 1401 aaPredicted RBP25.41■■□□□ 1.66
LIN28AP1-201ENST00000429574 U2SURPO15042 1029 aaKnown RBP25.41■■□□□ 1.66
LIN28AP1-201ENST00000429574 PTCD1O75127 700 aaKnown RBP25.41■■□□□ 1.66
LIN28AP1-201ENST00000429574 SMIM5Q71RC9 77 aa25.41■■□□□ 1.66
LIN28AP1-201ENST00000429574 NLGN2Q8NFZ4 835 aa25.41■■□□□ 1.66
LIN28AP1-201ENST00000429574 CD2APQ9Y5K6 639 aa25.4■■□□□ 1.66
LIN28AP1-201ENST00000429574 NPC1L1Q9UHC9 1359 aa25.4■■□□□ 1.66
LIN28AP1-201ENST00000429574 CFAP53Q96M91 514 aa25.39■■□□□ 1.66
LIN28AP1-201ENST00000429574 AMIGO3Q86WK7 504 aa25.38■■□□□ 1.65
LIN28AP1-201ENST00000429574 GRIN3BO60391 1043 aa25.37■■□□□ 1.65
LIN28AP1-201ENST00000429574 RC3H1Q5TC82 1133 aaKnown RBP25.37■■□□□ 1.65
LIN28AP1-201ENST00000429574 RFC4P35249 363 aa25.36■■□□□ 1.65
LIN28AP1-201ENST00000429574 SCN11AQ9UI33 1791 aa25.36■■□□□ 1.65
LIN28AP1-201ENST00000429574 ADRA2BP18089 450 aa25.35■■□□□ 1.65
LIN28AP1-201ENST00000429574 ZNF831Q5JPB2 1677 aa25.34■■□□□ 1.65
LIN28AP1-201ENST00000429574 SLC52A2Q9HAB3 445 aa25.34■■□□□ 1.65
LIN28AP1-201ENST00000429574 CNTNAP4Q9C0A0 1308 aa25.34■■□□□ 1.65
LIN28AP1-201ENST00000429574 MTHFSDQ2M296 383 aaKnown RBP25.33■■□□□ 1.65
LIN28AP1-201ENST00000429574 NLGN1Q8N2Q7 840 aa25.33■■□□□ 1.65
LIN28AP1-201ENST00000429574 SLC4A9Q96Q91 983 aa25.33■■□□□ 1.65
LIN28AP1-201ENST00000429574 RNMTO43148 476 aaKnown RBP25.32■■□□□ 1.64
LIN28AP1-201ENST00000429574 RPS6KA4O75676 772 aa25.32■■□□□ 1.64
LIN28AP1-201ENST00000429574 LGR6Q9HBX8 967 aa25.32■■□□□ 1.64
LIN28AP1-201ENST00000429574 NUDCQ9Y266 331 aa25.32■■□□□ 1.64
LIN28AP1-201ENST00000429574 MMP10P09238 476 aa25.3■■□□□ 1.64
LIN28AP1-201ENST00000429574 ZNF784Q8NCA9 323 aaPredicted RBP25.3■■□□□ 1.64
LIN28AP1-201ENST00000429574 ARHGEF1Q92888 912 aaKnown RBP25.3■■□□□ 1.64
LIN28AP1-201ENST00000429574 CRKLP46109 303 aaKnown RBP25.29■■□□□ 1.64
LIN28AP1-201ENST00000429574 GAS2L2Q8NHY3 880 aa25.29■■□□□ 1.64
LIN28AP1-201ENST00000429574 COL5A3P25940 1745 aaPredicted RBP25.29■■□□□ 1.64
LIN28AP1-201ENST00000429574 VIRMAQ69YN4 1812 aaKnown RBP25.28■■□□□ 1.64
LIN28AP1-201ENST00000429574 YBX3P16989 372 aaKnown RBP eCLIP25.26■■□□□ 1.63
LIN28AP1-201ENST00000429574 TEFQ10587 303 aa25.26■■□□□ 1.63
LIN28AP1-201ENST00000429574 TTC5Q8N0Z6 440 aa25.26■■□□□ 1.63
LIN28AP1-201ENST00000429574 PARP3Q9Y6F1 533 aa25.26■■□□□ 1.63
LIN28AP1-201ENST00000429574 GNAT3A8MTJ3 354 aa25.25■■□□□ 1.63
LIN28AP1-201ENST00000429574 SLC39A6Q13433 755 aa25.25■■□□□ 1.63
LIN28AP1-201ENST00000429574 CCDC87Q9NVE4 849 aa25.24■■□□□ 1.63
LIN28AP1-201ENST00000429574 DNAJC10Q8IXB1 793 aa25.23■■□□□ 1.63
LIN28AP1-201ENST00000429574 MYH14Q7Z406 1995 aaKnown RBP25.22■■□□□ 1.63
LIN28AP1-201ENST00000429574 ZPR1O75312 459 aa25.22■■□□□ 1.63
LIN28AP1-201ENST00000429574 GYS1P13807 737 aa25.22■■□□□ 1.63
LIN28AP1-201ENST00000429574 WWC3Q9ULE0 1092 aa25.22■■□□□ 1.63
LIN28AP1-201ENST00000429574 COL3A1P02461 1466 aaPredicted RBP25.21■■□□□ 1.63
LIN28AP1-201ENST00000429574 U2AF1L5P0DN76 240 aaPredicted RBP25.21■■□□□ 1.63
LIN28AP1-201ENST00000429574 PPP2R1AP30153 589 aa25.21■■□□□ 1.63
LIN28AP1-201ENST00000429574 U2AF1Q01081 240 aaKnown RBP eCLIP25.21■■□□□ 1.63
LIN28AP1-201ENST00000429574 UTRNP46939 3433 aa25.21■■□□□ 1.63
LIN28AP1-201ENST00000429574 PRKAR2BP31323 418 aa25.2■■□□□ 1.62
LIN28AP1-201ENST00000429574 TJP1Q07157 1748 aa25.19■■□□□ 1.62
LIN28AP1-201ENST00000429574 MRC1P22897 1456 aa25.19■■□□□ 1.62
LIN28AP1-201ENST00000429574 NEFMP07197 916 aa25.18■■□□□ 1.62
LIN28AP1-201ENST00000429574 TGFB2P61812 414 aa25.18■■□□□ 1.62
LIN28AP1-201ENST00000429574 INTS5Q6P9B9 1019 aaKnown RBP25.18■■□□□ 1.62
LIN28AP1-201ENST00000429574 VSIG10Q8N0Z9 540 aa25.18■■□□□ 1.62
LIN28AP1-201ENST00000429574 CICQ96RK0 1608 aaPredicted RBP25.17■■□□□ 1.62
LIN28AP1-201ENST00000429574 STARD3NLO95772 234 aa25.17■■□□□ 1.62
LIN28AP1-201ENST00000429574 RTF1Q92541 710 aaKnown RBP25.17■■□□□ 1.62
LIN28AP1-201ENST00000429574 SRP68Q9UHB9 627 aaKnown RBP25.17■■□□□ 1.62
LIN28AP1-201ENST00000429574 C4AP0C0L4 1744 aa25.16■■□□□ 1.62
LIN28AP1-201ENST00000429574 CYP19A1P11511 503 aaPredicted RBP25.16■■□□□ 1.62
LIN28AP1-201ENST00000429574 NPM2Q86SE8 214 aaKnown RBP25.16■■□□□ 1.62
LIN28AP1-201ENST00000429574 USP42Q9H9J4 1324 aaKnown RBP25.15■■□□□ 1.62
LIN28AP1-201ENST00000429574 IL17REQ8NFR9 667 aa25.14■■□□□ 1.62
LIN28AP1-201ENST00000429574 TEX13AQ9BXU3 409 aaPredicted RBP25.14■■□□□ 1.62
LIN28AP1-201ENST00000429574 RSPH6AQ9H0K4 717 aa25.14■■□□□ 1.62
LIN28AP1-201ENST00000429574 FCHSD2O94868 740 aa25.13■■□□□ 1.61
LIN28AP1-201ENST00000429574 CANXP27824 592 aaKnown RBP25.13■■□□□ 1.61
LIN28AP1-201ENST00000429574 FKBP8Q14318 412 aa25.13■■□□□ 1.61
LIN28AP1-201ENST00000429574 ADAMTS7Q9UKP4 1686 aa25.13■■□□□ 1.61
LIN28AP1-201ENST00000429574 GOLGB1Q14789 3259 aaKnown RBP25.12■■□□□ 1.61
LIN28AP1-201ENST00000429574 A0A0G2JLW4 131 aa25.12■■□□□ 1.61
LIN28AP1-201ENST00000429574 USPL1Q5W0Q7 1092 aa25.12■■□□□ 1.61
LIN28AP1-201ENST00000429574 ZNF790Q6PG37 636 aa25.12■■□□□ 1.61
LIN28AP1-201ENST00000429574 PHACTR3Q96KR7 559 aa25.12■■□□□ 1.61
LIN28AP1-201ENST00000429574 BCS1LQ9Y276 419 aa25.12■■□□□ 1.61
LIN28AP1-201ENST00000429574 SOS1Q07889 1333 aaPredicted RBP25.12■■□□□ 1.61
LIN28AP1-201ENST00000429574 BTBD11A6QL63 1104 aa25.11■■□□□ 1.61
LIN28AP1-201ENST00000429574 GIGYF1O75420 1035 aaPredicted RBP25.11■■□□□ 1.61
LIN28AP1-201ENST00000429574 KCPQ6ZWJ8 1503 aa25.11■■□□□ 1.61
LIN28AP1-201ENST00000429574 FMNL2Q96PY5 1086 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms