RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 PRPF40BQ6NWY9 871 aaKnown RBP16.49■□□□□ 0.23
SGMS1-203ENST00000429490 SRCIN1Q9C0H9 1055 aa16.49■□□□□ 0.23
SGMS1-203ENST00000429490 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.49■□□□□ 0.23
SGMS1-203ENST00000429490 CKAP2LQ8IYA6 745 aa16.48■□□□□ 0.23
SGMS1-203ENST00000429490 NPHP1O15259 732 aa16.48■□□□□ 0.23
SGMS1-203ENST00000429490 LARP1BQ659C4 914 aaKnown RBP16.48■□□□□ 0.23
SGMS1-203ENST00000429490 ABCC1P33527 1531 aa16.48■□□□□ 0.23
SGMS1-203ENST00000429490 PNMA6EA0A0J9YXQ4 647 aa16.47■□□□□ 0.23
SGMS1-203ENST00000429490 NECAB1Q8N987 351 aa16.47■□□□□ 0.23
SGMS1-203ENST00000429490 PTPRCP08575 1304 aa16.47■□□□□ 0.23
SGMS1-203ENST00000429490 TFIP11Q9UBB9 837 aaKnown RBP16.47■□□□□ 0.23
SGMS1-203ENST00000429490 GOLGA6L19H0YKK7 550 aa16.47■□□□□ 0.23
SGMS1-203ENST00000429490 PPFIA3O75145 1194 aa16.47■□□□□ 0.23
SGMS1-203ENST00000429490 FAM184AQ8NB25 1140 aa16.47■□□□□ 0.23
SGMS1-203ENST00000429490 BECN2A8MW95 431 aa16.46■□□□□ 0.23
SGMS1-203ENST00000429490 PPP1R42Q7Z4L9 355 aa16.46■□□□□ 0.23
SGMS1-203ENST00000429490 SPDYE4A6NLX3 237 aa16.46■□□□□ 0.23
SGMS1-203ENST00000429490 CHMLP26374 656 aa16.46■□□□□ 0.23
SGMS1-203ENST00000429490 TAF7Q15545 349 aaPredicted RBP16.46■□□□□ 0.23
SGMS1-203ENST00000429490 CCDC183Q5T5S1 534 aa16.46■□□□□ 0.23
SGMS1-203ENST00000429490 PDRG1Q9NUG6 133 aa16.46■□□□□ 0.23
SGMS1-203ENST00000429490 STX6O43752 255 aa16.45■□□□□ 0.22
SGMS1-203ENST00000429490 MTHFSDQ2M296 383 aaKnown RBP16.45■□□□□ 0.22
SGMS1-203ENST00000429490 FSD1Q9BTV5 496 aa16.45■□□□□ 0.22
SGMS1-203ENST00000429490 CYP46A1Q9Y6A2 500 aa16.45■□□□□ 0.22
SGMS1-203ENST00000429490 YTHDC2Q9H6S0 1430 aaKnown RBP16.45■□□□□ 0.22
SGMS1-203ENST00000429490 ZNF330Q9Y3S2 320 aaPredicted RBP16.45■□□□□ 0.22
SGMS1-203ENST00000429490 PLXNC1O60486 1568 aa16.45■□□□□ 0.22
SGMS1-203ENST00000429490 HMGN5P82970 282 aaKnown RBP16.45■□□□□ 0.22
SGMS1-203ENST00000429490 ABTB2Q8N961 1025 aa16.45■□□□□ 0.22
SGMS1-203ENST00000429490 KIF3AQ9Y496 699 aa16.45■□□□□ 0.22
SGMS1-203ENST00000429490 G3BP1Q13283 466 aaKnown RBP eCLIP16.44■□□□□ 0.22
SGMS1-203ENST00000429490 RIMS2Q9UQ26 1411 aa16.44■□□□□ 0.22
SGMS1-203ENST00000429490 LAMC1P11047 1609 aa16.44■□□□□ 0.22
SGMS1-203ENST00000429490 IGSF3O75054 1194 aa16.44■□□□□ 0.22
SGMS1-203ENST00000429490 CCDC192P0DO97 292 aa16.44■□□□□ 0.22
SGMS1-203ENST00000429490 DNM1Q05193 864 aaKnown RBP16.44■□□□□ 0.22
SGMS1-203ENST00000429490 MYOM2P54296 1465 aa16.44■□□□□ 0.22
SGMS1-203ENST00000429490 ACEP12821 1306 aa16.44■□□□□ 0.22
SGMS1-203ENST00000429490 NOLC1Q14978 699 aaKnown RBP eCLIP16.43■□□□□ 0.22
SGMS1-203ENST00000429490 FAM173BQ6P4H8 233 aa16.43■□□□□ 0.22
SGMS1-203ENST00000429490 MAP3K4Q9Y6R4 1608 aa16.43■□□□□ 0.22
SGMS1-203ENST00000429490 NCBP3Q53F19 620 aaKnown RBP16.43■□□□□ 0.22
SGMS1-203ENST00000429490 MTERF4Q7Z6M4 381 aaKnown RBP16.43■□□□□ 0.22
SGMS1-203ENST00000429490 LIMCH1Q9UPQ0 1083 aa16.43■□□□□ 0.22
SGMS1-203ENST00000429490 GJB2P29033 226 aa16.43■□□□□ 0.22
SGMS1-203ENST00000429490 AACSQ86V21 672 aa16.43■□□□□ 0.22
SGMS1-203ENST00000429490 UNC5CLQ8IV45 518 aa16.43■□□□□ 0.22
SGMS1-203ENST00000429490 DDX11Q96FC9 970 aa16.43■□□□□ 0.22
SGMS1-203ENST00000429490 EID1Q9Y6B2 187 aa16.43■□□□□ 0.22
SGMS1-203ENST00000429490 ZNF771Q7L3S4 317 aaPredicted RBP16.42■□□□□ 0.22
SGMS1-203ENST00000429490 TNMDQ9H2S6 317 aa16.42■□□□□ 0.22
SGMS1-203ENST00000429490 A0A0U1RQG5 324 aaPredicted RBP16.42■□□□□ 0.22
SGMS1-203ENST00000429490 JARID2Q92833 1246 aaPredicted RBP16.42■□□□□ 0.22
SGMS1-203ENST00000429490 RBM33Q96EV2 1170 aaKnown RBP16.42■□□□□ 0.22
SGMS1-203ENST00000429490 RTL1A6NKG5 1358 aa16.42■□□□□ 0.22
SGMS1-203ENST00000429490 ABCA6Q8N139 1617 aa16.42■□□□□ 0.22
SGMS1-203ENST00000429490 CHL1O00533 1208 aa16.42■□□□□ 0.22
SGMS1-203ENST00000429490 AK9Q5TCS8 1911 aa16.41■□□□□ 0.22
SGMS1-203ENST00000429490 GNAT3A8MTJ3 354 aa16.41■□□□□ 0.22
SGMS1-203ENST00000429490 DYNC1I1O14576 645 aa16.41■□□□□ 0.22
SGMS1-203ENST00000429490 AK2P54819 239 aa16.41■□□□□ 0.22
SGMS1-203ENST00000429490 KRT85P78386 507 aa16.41■□□□□ 0.22
SGMS1-203ENST00000429490 CCDC8Q9H0W5 538 aaPredicted RBP16.41■□□□□ 0.22
SGMS1-203ENST00000429490 ZFYVE16Q7Z3T8 1539 aa16.41■□□□□ 0.22
SGMS1-203ENST00000429490 C16orf45Q96MC5 204 aaPredicted RBP16.41■□□□□ 0.22
SGMS1-203ENST00000429490 FMNL2Q96PY5 1086 aa16.41■□□□□ 0.22
SGMS1-203ENST00000429490 PHAXQ9H814 394 aaKnown RBP16.41■□□□□ 0.22
SGMS1-203ENST00000429490 ZDHHC9Q9Y397 364 aa16.41■□□□□ 0.22
SGMS1-203ENST00000429490 PI4KAP2A4QPH2 592 aa16.4■□□□□ 0.22
SGMS1-203ENST00000429490 DDIT3P35638 169 aa16.4■□□□□ 0.22
SGMS1-203ENST00000429490 SF3A1Q15459 793 aaKnown RBP16.4■□□□□ 0.22
SGMS1-203ENST00000429490 TPD52L1Q16890 204 aaPredicted RBP16.4■□□□□ 0.22
SGMS1-203ENST00000429490 PI4KAP1Q8N8J0 262 aa16.4■□□□□ 0.22
SGMS1-203ENST00000429490 RHPN1Q8TCX5 695 aa16.4■□□□□ 0.22
SGMS1-203ENST00000429490 KIF1BPQ96EK5 621 aa16.4■□□□□ 0.22
SGMS1-203ENST00000429490 BOLA2Q9H3K6 86 aa16.4■□□□□ 0.22
SGMS1-203ENST00000429490 A0A0G2JS52 829 aa16.4■□□□□ 0.22
SGMS1-203ENST00000429490 RAB11FIP3O75154 756 aa16.4■□□□□ 0.22
SGMS1-203ENST00000429490 ZSCAN22P10073 491 aaPredicted RBP16.4■□□□□ 0.22
SGMS1-203ENST00000429490 NUP62CLQ9H1M0 184 aa16.4■□□□□ 0.22
SGMS1-203ENST00000429490 LETM1O95202 739 aaPredicted RBP16.4■□□□□ 0.22
SGMS1-203ENST00000429490 SYT1P21579 422 aa16.4■□□□□ 0.22
SGMS1-203ENST00000429490 HS1BP3Q53T59 392 aa16.4■□□□□ 0.22
SGMS1-203ENST00000429490 HSP90AB4PQ58FF6 505 aa16.4■□□□□ 0.22
SGMS1-203ENST00000429490 SPHKAPQ2M3C7 1700 aa16.4■□□□□ 0.22
SGMS1-203ENST00000429490 KDM4AO75164 1064 aa16.39■□□□□ 0.21
SGMS1-203ENST00000429490 BRD1O95696 1058 aa16.39■□□□□ 0.21
SGMS1-203ENST00000429490 ATP8B2P98198 1209 aa16.39■□□□□ 0.21
SGMS1-203ENST00000429490 FILIP1Q7Z7B0 1213 aa16.39■□□□□ 0.21
SGMS1-203ENST00000429490 IQGAP1P46940 1657 aa16.39■□□□□ 0.21
SGMS1-203ENST00000429490 MCM5P33992 734 aa16.39■□□□□ 0.21
SGMS1-203ENST00000429490 PPP4R3BQ5MIZ7 849 aa16.39■□□□□ 0.21
SGMS1-203ENST00000429490 RNF20Q5VTR2 975 aa16.39■□□□□ 0.21
SGMS1-203ENST00000429490 HTATSF1O43719 755 aaKnown RBP16.39■□□□□ 0.21
SGMS1-203ENST00000429490 DNAJC2Q99543 621 aaKnown RBP16.39■□□□□ 0.21
SGMS1-203ENST00000429490 TTC21BQ7Z4L5 1316 aa16.38■□□□□ 0.21
SGMS1-203ENST00000429490 IQSEC2Q5JU85 1478 aa16.38■□□□□ 0.21
SGMS1-203ENST00000429490 C1orf141Q5JVX7 400 aa16.38■□□□□ 0.21
SGMS1-203ENST00000429490 PDCL2Q8N4E4 241 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms