RNA–Protein interactions for RNA: ENST00000429162.2

CASC4-203, Transcript of cancer susceptibility 4, humanhuman

TSL 2

Gene CASC4, Length 1,918 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-203ENST00000429162 LGR6Q9HBX8 967 aa24.81■■□□□ 1.56
CASC4-203ENST00000429162 PXDNLA1KZ92 1463 aa24.81■■□□□ 1.56
CASC4-203ENST00000429162 HOXB7P09629 217 aa24.8■■□□□ 1.56
CASC4-203ENST00000429162 MYT1Q01538 1121 aa24.8■■□□□ 1.56
CASC4-203ENST00000429162 FLIIQ13045 1269 aa24.8■■□□□ 1.56
CASC4-203ENST00000429162 RPAP2Q8IXW5 612 aaPredicted RBP24.8■■□□□ 1.56
CASC4-203ENST00000429162 ANKRD44Q8N8A2 993 aa24.8■■□□□ 1.56
CASC4-203ENST00000429162 ADAMTS7Q9UKP4 1686 aa24.8■■□□□ 1.56
CASC4-203ENST00000429162 ANKRD45Q5TZF3 282 aa24.79■■□□□ 1.56
CASC4-203ENST00000429162 HDGFL1Q5TGJ6 251 aa24.78■■□□□ 1.56
CASC4-203ENST00000429162 PLEKHG2Q9H7P9 1386 aa24.78■■□□□ 1.56
CASC4-203ENST00000429162 RNMTO43148 476 aaKnown RBP24.78■■□□□ 1.56
CASC4-203ENST00000429162 SEC24BO95487 1268 aa24.77■■□□□ 1.56
CASC4-203ENST00000429162 EIF4A1P60842 406 aaKnown RBP24.77■■□□□ 1.56
CASC4-203ENST00000429162 MEIS3Q99687 375 aa24.77■■□□□ 1.56
CASC4-203ENST00000429162 FKBP5Q13451 457 aaPredicted RBP24.76■■□□□ 1.55
CASC4-203ENST00000429162 CEP85Q6P2H3 762 aa24.76■■□□□ 1.55
CASC4-203ENST00000429162 SLC4A10Q6U841 1118 aa24.76■■□□□ 1.55
CASC4-203ENST00000429162 MPRIPQ6WCQ1 1025 aa24.76■■□□□ 1.55
CASC4-203ENST00000429162 SIPA1L3O60292 1781 aaPredicted RBP24.76■■□□□ 1.55
CASC4-203ENST00000429162 CPDO75976 1380 aa24.76■■□□□ 1.55
CASC4-203ENST00000429162 F6X3S4 739 aa24.76■■□□□ 1.55
CASC4-203ENST00000429162 BRINP3Q76B58 766 aa24.76■■□□□ 1.55
CASC4-203ENST00000429162 BTBD11A6QL63 1104 aa24.75■■□□□ 1.55
CASC4-203ENST00000429162 NECTIN2Q92692 538 aa24.75■■□□□ 1.55
CASC4-203ENST00000429162 DCTPP1Q9H773 170 aa24.75■■□□□ 1.55
CASC4-203ENST00000429162 RAPGEF4Q8WZA2 1011 aa24.74■■□□□ 1.55
CASC4-203ENST00000429162 DAXXQ9UER7 740 aaPredicted RBP24.74■■□□□ 1.55
CASC4-203ENST00000429162 NLRP2Q9NX02 1062 aa24.74■■□□□ 1.55
CASC4-203ENST00000429162 CABLES1Q8TDN4 633 aa24.72■■□□□ 1.55
CASC4-203ENST00000429162 HMMRO75330 724 aa24.71■■□□□ 1.55
CASC4-203ENST00000429162 TATP17735 454 aaPredicted RBP24.71■■□□□ 1.55
CASC4-203ENST00000429162 BMP2KLQ5H9B9 411 aa24.71■■□□□ 1.55
CASC4-203ENST00000429162 ZNF335Q9H4Z2 1342 aaPredicted RBP24.71■■□□□ 1.55
CASC4-203ENST00000429162 GNAI3P08754 354 aa24.7■■□□□ 1.54
CASC4-203ENST00000429162 CSB-PGBD3P0DP91 1061 aa24.7■■□□□ 1.54
CASC4-203ENST00000429162 TBC1D32Q96NH3 1257 aa24.7■■□□□ 1.54
CASC4-203ENST00000429162 MEGF6O75095 1541 aa24.69■■□□□ 1.54
CASC4-203ENST00000429162 GNAI2P04899 355 aa24.69■■□□□ 1.54
CASC4-203ENST00000429162 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.69■■□□□ 1.54
CASC4-203ENST00000429162 SCN11AQ9UI33 1791 aa24.69■■□□□ 1.54
CASC4-203ENST00000429162 SPG7Q9UQ90 795 aa24.69■■□□□ 1.54
CASC4-203ENST00000429162 PKD1L3Q7Z443 1732 aa24.68■■□□□ 1.54
CASC4-203ENST00000429162 KCNQ3O43525 872 aa24.67■■□□□ 1.54
CASC4-203ENST00000429162 SOS2Q07890 1332 aaPredicted RBP24.67■■□□□ 1.54
CASC4-203ENST00000429162 EIF2S2P20042 333 aaKnown RBP24.67■■□□□ 1.54
CASC4-203ENST00000429162 CHRNA2Q15822 529 aa24.67■■□□□ 1.54
CASC4-203ENST00000429162 SLAIN2Q9P270 581 aa24.67■■□□□ 1.54
CASC4-203ENST00000429162 HEG1Q9ULI3 1381 aa24.65■■□□□ 1.54
CASC4-203ENST00000429162 CHPF2Q9P2E5 772 aa24.65■■□□□ 1.54
CASC4-203ENST00000429162 ABCA3Q99758 1704 aa24.64■■□□□ 1.54
CASC4-203ENST00000429162 KDM6AO15550 1401 aaPredicted RBP24.64■■□□□ 1.54
CASC4-203ENST00000429162 PHAXQ9H814 394 aaKnown RBP24.64■■□□□ 1.53
CASC4-203ENST00000429162 PHKG2P15735 406 aa24.63■■□□□ 1.53
CASC4-203ENST00000429162 MRC1P22897 1456 aa24.62■■□□□ 1.53
CASC4-203ENST00000429162 NHSL1Q5SYE7 1610 aa24.62■■□□□ 1.53
CASC4-203ENST00000429162 MFAP1P55081 439 aaKnown RBP24.62■■□□□ 1.53
CASC4-203ENST00000429162 BECN1Q14457 450 aa24.62■■□□□ 1.53
CASC4-203ENST00000429162 DBF4Q9UBU7 674 aaPredicted RBP24.62■■□□□ 1.53
CASC4-203ENST00000429162 PARP4Q9UKK3 1724 aaKnown RBP24.61■■□□□ 1.53
CASC4-203ENST00000429162 IFNL2Q8IZJ0 200 aa24.61■■□□□ 1.53
CASC4-203ENST00000429162 GIGYF1O75420 1035 aaPredicted RBP24.61■■□□□ 1.53
CASC4-203ENST00000429162 PLEKHM2Q8IWE5 1019 aa24.6■■□□□ 1.53
CASC4-203ENST00000429162 SRCIN1Q9C0H9 1055 aa24.6■■□□□ 1.53
CASC4-203ENST00000429162 C22orf23Q9BZE7 217 aa24.59■■□□□ 1.53
CASC4-203ENST00000429162 SLC52A2Q9HAB3 445 aa24.59■■□□□ 1.53
CASC4-203ENST00000429162 SLC4A3P48751 1232 aa24.59■■□□□ 1.53
CASC4-203ENST00000429162 PRDM11Q9NQV5 511 aa24.59■■□□□ 1.53
CASC4-203ENST00000429162 UBTFL1P0CB47 393 aaPredicted RBP24.58■■□□□ 1.53
CASC4-203ENST00000429162 HSP90AB1P08238 724 aaKnown RBP24.57■■□□□ 1.52
CASC4-203ENST00000429162 DNAAF4Q8WXU2 420 aa24.57■■□□□ 1.52
CASC4-203ENST00000429162 USP44Q9H0E7 712 aa24.57■■□□□ 1.52
CASC4-203ENST00000429162 WDR17Q8IZU2 1322 aa24.56■■□□□ 1.52
CASC4-203ENST00000429162 ATP8B2P98198 1209 aa24.56■■□□□ 1.52
CASC4-203ENST00000429162 DCAF5Q96JK2 942 aa24.56■■□□□ 1.52
CASC4-203ENST00000429162 EIF5BO60841 1220 aaKnown RBP24.55■■□□□ 1.52
CASC4-203ENST00000429162 TTC22Q5TAA0 569 aa24.55■■□□□ 1.52
CASC4-203ENST00000429162 LRRFIP2Q9Y608 721 aaKnown RBP24.55■■□□□ 1.52
CASC4-203ENST00000429162 COL5A2P05997 1499 aaPredicted RBP24.55■■□□□ 1.52
CASC4-203ENST00000429162 ADCY9O60503 1353 aa24.55■■□□□ 1.52
CASC4-203ENST00000429162 C5P01031 1676 aa24.55■■□□□ 1.52
CASC4-203ENST00000429162 CDC45O75419 566 aa24.55■■□□□ 1.52
CASC4-203ENST00000429162 NBR1Q14596 966 aa24.55■■□□□ 1.52
CASC4-203ENST00000429162 ZNF790Q6PG37 636 aa24.55■■□□□ 1.52
CASC4-203ENST00000429162 PI4KAP2A4QPH2 592 aa24.54■■□□□ 1.52
CASC4-203ENST00000429162 PI4KAP1Q8N8J0 262 aa24.54■■□□□ 1.52
CASC4-203ENST00000429162 HYPKQ9NX55 129 aa24.54■■□□□ 1.52
CASC4-203ENST00000429162 GSPT1P15170 499 aaKnown RBP24.53■■□□□ 1.52
CASC4-203ENST00000429162 BEND3Q5T5X7 828 aa24.53■■□□□ 1.52
CASC4-203ENST00000429162 APBB1O00213 710 aa24.53■■□□□ 1.52
CASC4-203ENST00000429162 CYP27B1O15528 508 aa24.52■■□□□ 1.52
CASC4-203ENST00000429162 SMARCA5O60264 1052 aaPredicted RBP24.52■■□□□ 1.52
CASC4-203ENST00000429162 ANXA1P04083 346 aa24.52■■□□□ 1.52
CASC4-203ENST00000429162 TBC1D9Q6ZT07 1266 aa24.52■■□□□ 1.52
CASC4-203ENST00000429162 C16orf71Q8IYS4 520 aaPredicted RBP24.51■■□□□ 1.51
CASC4-203ENST00000429162 PNMA6EA0A0J9YXQ4 647 aa24.51■■□□□ 1.51
CASC4-203ENST00000429162 TOM1L2Q6ZVM7 507 aa24.5■■□□□ 1.51
CASC4-203ENST00000429162 NFATC2IPQ8NCF5 419 aa24.5■■□□□ 1.51
CASC4-203ENST00000429162 DDX21Q9NR30 783 aaKnown RBP eCLIP24.5■■□□□ 1.51
CASC4-203ENST00000429162 IBTKQ9P2D0 1353 aaPredicted RBP24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms