RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 FKBP5Q13451 457 aaPredicted RBP16.98■□□□□ 0.31
THBS3-202ENST00000428962 GSE1Q14687 1217 aa16.98■□□□□ 0.31
THBS3-202ENST00000428962 USHBP1Q8N6Y0 703 aa16.98■□□□□ 0.31
THBS3-202ENST00000428962 SNX21Q969T3 373 aa16.98■□□□□ 0.31
THBS3-202ENST00000428962 TMEM94Q12767 1356 aa16.98■□□□□ 0.31
THBS3-202ENST00000428962 NCAPD2Q15021 1401 aa16.98■□□□□ 0.31
THBS3-202ENST00000428962 F6X3S4 739 aa16.97■□□□□ 0.31
THBS3-202ENST00000428962 HOXB7P09629 217 aa16.97■□□□□ 0.31
THBS3-202ENST00000428962 NBPF6Q5VWK0 638 aa16.97■□□□□ 0.31
THBS3-202ENST00000428962 NBPF4Q96M43 638 aa16.97■□□□□ 0.31
THBS3-202ENST00000428962 TRPM3Q9HCF6 1732 aaPredicted RBP16.97■□□□□ 0.31
THBS3-202ENST00000428962 KDM3BQ7LBC6 1761 aa16.97■□□□□ 0.31
THBS3-202ENST00000428962 OVOS2A0A0G2JMS6 1433 aa16.96■□□□□ 0.31
THBS3-202ENST00000428962 GSPT1P15170 499 aaKnown RBP16.96■□□□□ 0.31
THBS3-202ENST00000428962 CASC1Q6TDU7 716 aa16.96■□□□□ 0.31
THBS3-202ENST00000428962 AMOTQ4VCS5 1084 aa16.96■□□□□ 0.3
THBS3-202ENST00000428962 PLEKHO1Q53GL0 409 aaPredicted RBP16.96■□□□□ 0.3
THBS3-202ENST00000428962 HDGFL1Q5TGJ6 251 aa16.96■□□□□ 0.3
THBS3-202ENST00000428962 CAMTA1Q9Y6Y1 1673 aa16.95■□□□□ 0.3
THBS3-202ENST00000428962 ZBTB7CA1YPR0 619 aa16.95■□□□□ 0.3
THBS3-202ENST00000428962 AKAP4Q5JQC9 854 aa16.95■□□□□ 0.3
THBS3-202ENST00000428962 CHMP5Q9NZZ3 219 aa16.95■□□□□ 0.3
THBS3-202ENST00000428962 MST1RQ04912 1400 aa16.95■□□□□ 0.3
THBS3-202ENST00000428962 GCP02774 474 aa16.94■□□□□ 0.3
THBS3-202ENST00000428962 ARHGEF25Q86VW2 580 aa16.94■□□□□ 0.3
THBS3-202ENST00000428962 NCOA3Q9Y6Q9 1424 aa16.94■□□□□ 0.3
THBS3-202ENST00000428962 RGPD2P0DJD1 1756 aa16.94■□□□□ 0.3
THBS3-202ENST00000428962 ORAI2Q96SN7 254 aa16.93■□□□□ 0.3
THBS3-202ENST00000428962 ZNF530Q6P9A1 599 aaPredicted RBP16.93■□□□□ 0.3
THBS3-202ENST00000428962 C1orf167Q5SNV9 1468 aa16.93■□□□□ 0.3
THBS3-202ENST00000428962 TEFQ10587 303 aa16.92■□□□□ 0.3
THBS3-202ENST00000428962 HSPA1LP34931 641 aa16.91■□□□□ 0.3
THBS3-202ENST00000428962 C1orf141Q5JVX7 400 aa16.91■□□□□ 0.3
THBS3-202ENST00000428962 NECTIN2Q92692 538 aa16.91■□□□□ 0.3
THBS3-202ENST00000428962 EIF4A1P60842 406 aaKnown RBP16.91■□□□□ 0.3
THBS3-202ENST00000428962 C16orf71Q8IYS4 520 aaPredicted RBP16.91■□□□□ 0.3
THBS3-202ENST00000428962 OSBPL3Q9H4L5 887 aa16.91■□□□□ 0.3
THBS3-202ENST00000428962 C19orf44Q9H6X5 657 aa16.91■□□□□ 0.3
THBS3-202ENST00000428962 APBB1O00213 710 aa16.9■□□□□ 0.3
THBS3-202ENST00000428962 HSP90AB1P08238 724 aaKnown RBP16.9■□□□□ 0.3
THBS3-202ENST00000428962 KRT28Q7Z3Y7 464 aa16.9■□□□□ 0.3
THBS3-202ENST00000428962 ANKRD24Q8TF21 1146 aa16.9■□□□□ 0.3
THBS3-202ENST00000428962 SMARCA5O60264 1052 aaPredicted RBP16.89■□□□□ 0.29
THBS3-202ENST00000428962 ATP8B2P98198 1209 aa16.89■□□□□ 0.29
THBS3-202ENST00000428962 LMOD2Q6P5Q4 547 aa16.89■□□□□ 0.29
THBS3-202ENST00000428962 LRRC59Q96AG4 307 aaKnown RBP16.89■□□□□ 0.29
THBS3-202ENST00000428962 DCCP43146 1447 aa16.89■□□□□ 0.29
THBS3-202ENST00000428962 ALS2Q96Q42 1657 aa16.89■□□□□ 0.29
THBS3-202ENST00000428962 UBTFL1P0CB47 393 aaPredicted RBP16.89■□□□□ 0.29
THBS3-202ENST00000428962 SDSP20132 328 aa16.89■□□□□ 0.29
THBS3-202ENST00000428962 XPCQ01831 940 aaPredicted RBP16.89■□□□□ 0.29
THBS3-202ENST00000428962 SPRYD3Q8NCJ5 442 aa16.89■□□□□ 0.29
THBS3-202ENST00000428962 KIF2CQ99661 725 aa16.89■□□□□ 0.29
THBS3-202ENST00000428962 LRRCC1Q9C099 1032 aa16.89■□□□□ 0.29
THBS3-202ENST00000428962 CIZ1Q9ULV3 898 aaPredicted RBP16.89■□□□□ 0.29
THBS3-202ENST00000428962 XIRP1Q702N8 1843 aaKnown RBP16.88■□□□□ 0.29
THBS3-202ENST00000428962 BTBD11A6QL63 1104 aa16.88■□□□□ 0.29
THBS3-202ENST00000428962 OTUD7AQ8TE49 926 aaPredicted RBP16.88■□□□□ 0.29
THBS3-202ENST00000428962 LGR6Q9HBX8 967 aa16.88■□□□□ 0.29
THBS3-202ENST00000428962 RABEP1Q15276 862 aa16.87■□□□□ 0.29
THBS3-202ENST00000428962 IBTKQ9P2D0 1353 aaPredicted RBP16.87■□□□□ 0.29
THBS3-202ENST00000428962 RNMTO43148 476 aaKnown RBP16.86■□□□□ 0.29
THBS3-202ENST00000428962 REC8O95072 547 aa16.86■□□□□ 0.29
THBS3-202ENST00000428962 SRCIN1Q9C0H9 1055 aa16.86■□□□□ 0.29
THBS3-202ENST00000428962 LRRFIP2Q9Y608 721 aaKnown RBP16.86■□□□□ 0.29
THBS3-202ENST00000428962 PXDNQ92626 1479 aa16.86■□□□□ 0.29
THBS3-202ENST00000428962 K7ELQ4 463 aaPredicted RBP16.86■□□□□ 0.29
THBS3-202ENST00000428962 PDE1AP54750 535 aa16.86■□□□□ 0.29
THBS3-202ENST00000428962 EXOC6BQ9Y2D4 811 aa16.86■□□□□ 0.29
THBS3-202ENST00000428962 ATF3P18847 181 aa16.85■□□□□ 0.29
THBS3-202ENST00000428962 EIF2S2P20042 333 aaKnown RBP16.85■□□□□ 0.29
THBS3-202ENST00000428962 USP44Q9H0E7 712 aa16.85■□□□□ 0.29
THBS3-202ENST00000428962 HSP90AA1P07900 732 aaKnown RBP16.84■□□□□ 0.29
THBS3-202ENST00000428962 DDIT3P35638 169 aa16.84■□□□□ 0.29
THBS3-202ENST00000428962 PHAXQ9H814 394 aaKnown RBP16.84■□□□□ 0.29
THBS3-202ENST00000428962 ADAMTS7Q9UKP4 1686 aa16.84■□□□□ 0.29
THBS3-202ENST00000428962 AOX1Q06278 1338 aa16.84■□□□□ 0.29
THBS3-202ENST00000428962 ABCC6O95255 1503 aa16.84■□□□□ 0.29
THBS3-202ENST00000428962 PNMA6EA0A0J9YXQ4 647 aa16.84■□□□□ 0.29
THBS3-202ENST00000428962 MPRIPQ6WCQ1 1025 aa16.84■□□□□ 0.29
THBS3-202ENST00000428962 USP26Q9BXU7 913 aa16.84■□□□□ 0.29
THBS3-202ENST00000428962 CHPF2Q9P2E5 772 aa16.84■□□□□ 0.29
THBS3-202ENST00000428962 ERBB3P21860 1342 aa16.83■□□□□ 0.29
THBS3-202ENST00000428962 SALL3Q9BXA9 1300 aa16.83■□□□□ 0.29
THBS3-202ENST00000428962 SIPA1L3O60292 1781 aaPredicted RBP16.83■□□□□ 0.29
THBS3-202ENST00000428962 PLEKHG2Q9H7P9 1386 aa16.83■□□□□ 0.28
THBS3-202ENST00000428962 RAB11FIP3O75154 756 aa16.83■□□□□ 0.28
THBS3-202ENST00000428962 MX1P20591 662 aa16.83■□□□□ 0.28
THBS3-202ENST00000428962 MCM4P33991 863 aa16.83■□□□□ 0.28
THBS3-202ENST00000428962 DNAAF4Q8WXU2 420 aa16.83■□□□□ 0.28
THBS3-202ENST00000428962 SLAIN2Q9P270 581 aa16.83■□□□□ 0.28
THBS3-202ENST00000428962 DBF4Q9UBU7 674 aaPredicted RBP16.83■□□□□ 0.28
THBS3-202ENST00000428962 DDX11L8A8MPP1 907 aa16.82■□□□□ 0.28
THBS3-202ENST00000428962 ERC2O15083 957 aa16.82■□□□□ 0.28
THBS3-202ENST00000428962 CADPS2Q86UW7 1296 aa16.82■□□□□ 0.28
THBS3-202ENST00000428962 SSH3Q8TE77 659 aa16.82■□□□□ 0.28
THBS3-202ENST00000428962 TUBGCP6Q96RT7 1819 aa16.82■□□□□ 0.28
THBS3-202ENST00000428962 HDAC5Q9UQL6 1122 aa16.81■□□□□ 0.28
THBS3-202ENST00000428962 RGPD5Q99666 1765 aa16.81■□□□□ 0.28
THBS3-202ENST00000428962 HEG1Q9ULI3 1381 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms